[Thu Aug 25 00:24:24 2016] >Input file: TM1JDMCGG.pdb >TM segments: A9-26 MAIDEN score = -1.0967 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- BBeads pair Empirical energy ----------- ---------------- I20A-L25A 0.739231593200492 F9A-I14A 0.650063390234206 L21A-V26A 0.595185421718732 I17A-M22A 0.492122533969582 L10A-V15A 0.388625944643147 I14A-V19A 0.300906630167844 F12A-I17A 0.239911140900778 L10A-T18A 0.226967943958279 V19A-L24A 0.203907110264078 N11A-L16A 0.169329067856991 I14A-I20A 0.161104480329426 V15A-I20A 0.118893120622261 T18A-L24A 0.107613232175688 I14A-L25A 0.105548191487197 L16A-W23A 0.0982940025445589 V15A-L25A 0.0816848196267923 L10A-I20A 0.0769923254930931 L10A-V19A 0.0753761531395628 V15A-L21A 0.0605234488807334 T13A-M22A 0.0453059434733209 I14A-L24A 0.0442927831497775 V15A-V26A 0.0425558303343614 L16A-L21A 0.0344734328836553 I14A-M22A 0.0305138621459795 F9A-T18A 0.0241602592189469 T13A-T18A 0.0159868807867536 V15A-L24A 0.00894943330772513 N11A-V19A -0.00276514797072647 L16A-L24A -0.00971987341357661 L10A-L16A -0.0114774713343508 N11A-I17A -0.0297230310216463 N11A-T18A -0.0538257569337812 F12A-I20A -0.0600004606401778 F12A-L21A -0.0619602588772503 F12A-T18A -0.0741572070952357 I14A-W23A -0.0741705713497645 I17A-V26A -0.0871525279063192 F9A-I17A -0.0964999211454103 L16A-V26A -0.104030393440754 V15A-W23A -0.113817034341547 F9A-V19A -0.120706722823575 N11A-I20A -0.135747302768823 T13A-L21A -0.136399213416864 T13A-V19A -0.141869723231834 T18A-W23A -0.14332923012801 T18A-L25A -0.14440078639295 N11A-L21A -0.151028272606746 L16A-M22A -0.161635888162818 T18A-V26A -0.165222874626413 F12A-V19A -0.173925607448338 L16A-L25A -0.205277888689454 F9A-L16A -0.23487090143823 T13A-I20A -0.240674284602747 V15A-M22A -0.247256980858987 F9A-V15A -0.287939697177317 I17A-L25A -0.303811970938449 V19A-L25A -0.333632041702016 V19A-V26A -0.339383737384291 I17A-L24A -0.340961185791745 I17A-W23A -0.341564599275827 I20A-V26A -0.344030979778845 L10A-I17A -0.374860477512895 I14A-L21A -0.387410704160875