[Wed Aug 24 18:40:00 2016] >Input file: TM1L6TCGD.pdb >TM segments: A5-33 MAIDEN score = -3.1719 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- BBeads pair Empirical energy ----------- ---------------- L19A-D24A 0.680758549619178 Y10A-V15A 0.570675011247197 I26A-L31A 0.391329819041861 D7A-A12A 0.339708518820173 A25A-G32A 0.31892060735112 A21A-I26A 0.295837229470906 D7A-M17A 0.281821946405683 L8A-A13A 0.265112336427872 D7A-V15A 0.25607003717516 M17A-I22A 0.248198964089804 L9A-A14A 0.235229233952423 D24A-G29A 0.20842299955142 I22A-G27A 0.17664656798605 M16A-A21A 0.168457717466025 N5A-Y10A 0.164274677755275 A21A-I28A 0.14248637391532 M6A-A14A 0.137078158871637 G18A-I26A 0.126219467790387 M6A-V15A 0.123181490512374 L9A-V15A 0.122967694094191 M17A-A25A 0.119444539394145 A20A-G27A 0.114322965491193 A12A-A20A 0.109708037183756 A20A-I28A 0.109000850070495 A13A-A21A 0.103959768975349 V15A-A25A 0.100843640355835 M16A-I22A 0.0941144050466303 N5A-A13A 0.0934373390274894 I26A-G32A 0.0716667265593625 A25A-G33A 0.0699382737756329 D24A-I30A 0.0685675128053074 G23A-L31A 0.0601282600740375 I22A-L31A 0.0561460462648662 L8A-M17A 0.0511026220477131 M17A-D24A 0.0455162809143941 G23A-G32A 0.0440107772737042 M11A-M16A 0.0435900352025165 I28A-G33A 0.0389441747062351 I22A-I28A 0.0320677591737315 L19A-G27A 0.0296169940601518 M11A-A20A 0.0186308473479695 M17A-G23A 0.0120326953655728 I22A-I30A 0.0119161765965545 G18A-G27A 0.0100139762190743 A14A-I22A 0.00368128040957361 A12A-L19A 0.00242889139541269 M16A-A25A 0.00240353162379092 A12A-A21A 0.000655453628967351 N5A-A14A -0.000344796482912191 G23A-G29A -0.00252067543166712 N5A-A12A -0.00404632381623493 A21A-G29A -0.0110925811079214 Y10A-L19A -0.0160019857954925 M16A-G23A -0.0186975272224732 L19A-I28A -0.0304848469967745 L8A-A14A -0.0318316071732549 L19A-G29A -0.032896178710204 A14A-G23A -0.033571765018543 A20A-I26A -0.034631440922432 G18A-G23A -0.0347202926683465 M11A-A21A -0.0385334870694631 I22A-G32A -0.0408913704519662 V15A-G23A -0.0448282094706611 A20A-A25A -0.0449599739051196 M17A-I26A -0.0464606578632214 G23A-I28A -0.047925398455714 D7A-M16A -0.0486563131307083 D7A-A13A -0.0529004145080902 A20A-G29A -0.0566003790596845 A21A-I30A -0.060463512288055 V15A-A21A -0.0619246488936511 L19A-A25A -0.0631790160596797 Y10A-A20A -0.0654081615368765 A13A-I22A -0.0667797041077227 Y10A-G18A -0.0670008986726406 D24A-G33A -0.0725814219261265 M11A-L19A -0.0890137997773546 G18A-D24A -0.0897278340802972 L9A-G18A -0.0934531359152793 A14A-L19A -0.106888860889434 L9A-M17A -0.113695389878215 D24A-G32A -0.117676694759503 L8A-M16A -0.117927387873561 A12A-G18A -0.121975554566377 G27A-G33A -0.123114755125838 A13A-A20A -0.132383480571296 Y10A-M16A -0.132794395481763 M16A-D24A -0.137130382909828 M11A-M17A -0.138496021391175 Y10A-M17A -0.159655269896711 L8A-V15A -0.165519965980027 N5A-M11A -0.166099540333494 M11A-G18A -0.173875412284012 V15A-D24A -0.176780647843223 V15A-I22A -0.185030987337735 A14A-A21A -0.193347299649405 G18A-A25A -0.209862506487129 A25A-L31A -0.210861022256144 G23A-I30A -0.212901445276591 M6A-A13A -0.218777805494672 D7A-A14A -0.23369699654306 V15A-A20A -0.245307802660342 A14A-A20A -0.245899425061135 M6A-M11A -0.254917148790275 A21A-G27A -0.267791277707751 M6A-A12A -0.269572395337034 I22A-G29A -0.275770889581195 L9A-M16A -0.285140410672498 I26A-G33A -0.286868777890259 D24A-L31A -0.290781220341395 M6A-M16A -0.290957346443864 A12A-M17A -0.293827870215604 A13A-L19A -0.319943234075508 L19A-I26A -0.364431481554402 G27A-G32A -0.4041055501408 A25A-I30A -0.429530091747179 A13A-G18A -0.467694151954906