[Wed Aug 24 17:18:12 2016] >Input file: TM1LGHATD.pdb >TM segments: A24-40_B25-41_E25-41_D24-40 MAIDEN score = -33.5776 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I24D-V25A 0.568186878125654 A35D-A40A 0.378828885618601 A30D-A32A 0.363725186967575 I31D-V29A 0.357370162327275 A32D-A36A 0.349558870859392 H34D-H35E 0.332678309850466 H35B-H34A 0.332660272554238 L38D-A36A 0.299704785771751 H34D-H34A 0.293813685654117 V28D-V25A 0.276171058681998 A35D-A36A 0.267894789946384 A31B-T27A 0.183744480810486 T27D-A31E 0.183691677806435 H34D-V38E 0.18028217293244 V38B-H34A 0.18020682582367 T27D-I31A 0.173544710167765 V37D-V37A 0.172327618061045 V29D-V28A 0.166373735234399 V37D-V33A 0.166350818673698 A31B-V33A 0.16597709320294 V33D-A31E 0.165935253010073 V33D-H35E 0.164260192879543 H35B-V33A 0.164237912227802 V25D-A26A 0.157772738782417 A30D-I28E 0.149814004459864 I28B-A30A 0.149812910019727 A40D-A40A 0.147140261903804 V37D-A39A 0.146978615460895 A32D-H34A 0.145505176989435 A36D-V33A 0.140828009710996 V28A-V37A 0.140503195104176 V28D-V37D 0.140501603069464 V25D-V28A 0.133030747819961 V37D-H35E 0.128350831698394 H35B-V37A 0.128341899010916 A34B-H34A 0.126855234678322 H34D-A34E 0.126811189274417 A35D-A30A 0.124165883701652 V29D-A32A 0.121720366140395 A39D-A32A 0.119858417264316 A26D-F27E 0.117360820380803 F27B-A26A 0.11679994905117 A30D-A31E 0.116767458552809 A31B-A30A 0.116712066700829 L38D-A35A 0.1157747680611 A36D-A35A 0.113312609837695 A30D-A36A 0.111563420907439 A31B-A26A 0.110873213773754 A26D-A31E 0.110817161244249 A26B-A34B 0.10922405874532 A26E-A34E 0.109221607699441 A32D-V28A 0.108852877044728 A39D-A35A 0.10807475394065 H34D-V29A 0.107688188247011 I31D-A32A 0.105968961107978 A30D-V28A 0.105625027662255 A36D-A36A 0.100348571072779 H34D-V37A 0.0988132684542524 I31D-V25A 0.0967503242597676 A26D-S25E 0.0936475432825876 S25B-A26A 0.0935019178756464 I31D-I31A 0.093317607507081 A35D-L38A 0.0929354719450348 A36D-A40A 0.0917693871734868 A26D-L30E 0.0909971550206219 L30B-A26A 0.0908745312288506 V28D-I24A 0.0901284870909077 A26B-H35B 0.086954571792222 A26E-H35E 0.0869058319454776 A30D-H35E 0.0857939628068634 H35B-A30A 0.0856065157341854 V37D-A35A 0.0846278395368509 V33D-A36A 0.0838410678560191 A32D-V33A 0.0813259152670756 V28D-A30A 0.0802673831326173 V33D-V29A 0.0790001174445063 L38D-L38A 0.0778781267500133 T27D-I24A 0.0774867811643469 V28D-I31A 0.0757234915373752 A36D-A32A 0.0741420487523428 A26D-V25A 0.0727936092292705 L38D-V38E 0.0723743883148424 V38B-L38A 0.0721862451619346 A30D-A26A 0.0708794545422915 A32D-A40D 0.0698456184636469 A32A-A40A 0.0698393291278072 V37D-A34E 0.0679696923197 A34B-V37A 0.0678485153690858 A39D-H34A 0.0672301149790799 A40D-V37A 0.0629321060648227 I31D-A39A 0.0627650383161376 A30D-A34E 0.060912479808195 A34B-A30A 0.0608897690384806 A30D-A30A 0.0603357343936817 A32D-A26A 0.0592100194845586 A26D-H34D 0.0586828393496917 A26A-H34A 0.0586777361104227 A30D-V25A 0.0562206977308808 A39D-L38A 0.0562197864192355 A40D-A39A 0.0535891357331419 A32D-A35A 0.0520843738476406 A40D-A36A 0.0500507293270848 H35B-V40B 0.0498970813981678 H35E-V40E 0.049852294431763 I31D-A26A 0.0497042989270575 I31D-H34A 0.0496931437548911 A36D-A39A 0.0494425249129422 I31A-A40A 0.0475012806797981 I31D-A40D 0.0474862677908279 A26D-A26A 0.0464521292657832 S25E-V33E 0.0446660169648299 S25B-V33B 0.0446637451092702 V29D-I28E 0.0440762560796903 I28B-V29A 0.0439087092740182 H34D-A35A 0.0427202515677572 A32D-A30A 0.0417490201386652 H34D-A40A 0.0416584304321441 V25D-I24A 0.0386839995257011 A31B-H34A 0.0379324251823272 H34D-A31E 0.0379006351095574 A35D-H34A 0.0378504098259724 A26D-A26E 0.0354768909676948 A26B-A26A 0.0354592322981273 I31D-V37A 0.0349150644659 A35D-I31A 0.0344203849833393 A30D-T27A 0.0323285288924393 L38D-A40A 0.0323050120066917 A31E-V40E 0.0317444091829682 A31B-V40B 0.031740917924246 V28D-A36D 0.0312180627530498 V28A-A36A 0.031210925357497 V36E-W41E 0.0308196170516337 V36B-W41B 0.0307583037965422 H34D-A30A 0.0298948850321956 L30E-V38E 0.0267851463641682 L30B-V38B 0.0267733470235809 V28D-A36A 0.0251077362803951 L38D-V33A 0.0217719195371924 T27D-V33A 0.02086793412554 L38D-H34A 0.0182811828991639 A26D-V29A 0.0160150568809598 V33D-A40D 0.0148020904267923 V33A-A40A 0.0147934627186368 H34D-L38A 0.0147556927973249 A35D-V29A 0.0126188523886952 A30A-V37A 0.0123319549921885 A30D-V37D 0.0123312470250516 A32B-V40B 0.00849079659668828 A32E-V40E 0.0084365724890425 H34D-A39A 0.00839035166498281 A32D-I31A 0.00789459303488016 A30D-V33A 0.00676843839545427 W39B-H34A 0.00545562020114221 H34D-W39E 0.00545289276118122 V37D-A36A 0.00477285822461138 A30D-L38D 0.00373773306414193 A30A-L38A 0.00372759793136535 A30D-L30E 0.00345943136892313 L30B-A30A 0.00322817782704377 I31D-A35A 0.00218084402020062 V28D-A26A 0.00168290916660352 A35D-V37A -0.000283124397925327 T27D-H34D -0.000960620049650363 T27A-H34A -0.000967811006457708 V33D-A32A -0.00186684353005884 I28B-T27A -0.00410548766580643 T27D-I28E -0.0042551845673291 A39D-V37A -0.0055291261852628 A35D-V28A -0.00786105616499067 A26D-V28A -0.0088189079020623 I24D-V28A -0.00983529544236106 T27D-F27E -0.0116631175594428 F27B-T27A -0.0116787770050062 V29D-H34D -0.0157772498624171 V29A-H34A -0.0158118958892162 A31E-W39E -0.0172475155263094 A31B-W39B -0.0172754125185053 H34D-I31A -0.0199985994894006 A39D-V33A -0.0223881279555123 V37D-A40A -0.0236460244898351 I31D-T27A -0.0237841730943344 I28E-L37E -0.0238721709536618 I28B-L37B -0.0239013431463775 A31B-V29A -0.0247933070821857 V29D-A31E -0.0248043795908877 V29D-V29A -0.0255618750296787 A30D-A32E -0.0264870946512201 A32B-A30A -0.0265519792751543 A40D-V38E -0.0283749585345463 V38B-A40A -0.0284320942535654 V29D-V33A -0.0290207221423149 V33D-A34E -0.029948459877579 A34B-V33A -0.0299546574649356 V33D-A35A -0.0307520393649376 F27B-H35B -0.031185530928961 F27E-H35E -0.0312212452121914 I24D-A32A -0.0336064541806547 V33D-V38E -0.0341982697420689 V38B-V33A -0.0342525094891266 A36D-V37A -0.0353680892615467 V37D-A32A -0.0358568968805799 L38D-A39A -0.0364447643130699 V29D-V25A -0.0389985056648179 I24D-T27A -0.0427762603586195 T27D-A36D -0.0433305479943576 T27A-A36A -0.0433370479256567 V29D-A26A -0.0449449857221436 V28D-T27A -0.0518674774024381 V37D-W39E -0.0525935485974509 V38B-A36A -0.0526831051892822 A36D-V38E -0.0526831051892822 W39B-V37A -0.052793693171588 T27D-A32A -0.0539038675961114 H34D-A36A -0.0565681484880862 A32D-V25A -0.0577074213706918 I31D-I24A -0.0633441120005838 I29E-V38E -0.0635642508902396 I29B-V38B -0.0636779453559608 T27A-A35A -0.064939189861871 T27D-A35D -0.0649554065113498 V29A-V37A -0.0695388196469153 V29D-V37D -0.0695650057113095 A32E-W41E -0.0718822297577697 A32B-W41B -0.0718833399387582 I28B-A26A -0.0721659619795219 I24D-A32D -0.0721778849349324 I24A-A32A -0.0721971638242938 A26D-I28E -0.0723871446014588 A32A-V37A -0.0739512268445255 A32D-V37D -0.0739578548095503 A26A-A35A -0.0746171614539909 A26D-A35D -0.0746178837162477 A32D-V29A -0.0750050254574415 A30A-A39A -0.0754573083059521 A30D-A39D -0.0754592966130052 A35D-V33A -0.0784597689005966 A35D-A39A -0.0788885957404251 S25E-A34E -0.080424341587225 S25B-A34B -0.080493583781621 V33D-V33A -0.0842303569210578 V33B-W41B -0.0856887007223356 V33E-W41E -0.0856954351865915 I24D-F27E -0.0863911753659035 F27B-I24A -0.0864538208314285 H34D-V33A -0.0864788982471243 V37D-V38E -0.0881453769130003 V38B-V37A -0.0882107536769325 I31D-A39D -0.0903195046150268 I31A-A39A -0.0903270202824836 A31E-V38E -0.0926506526137612 A31B-V38B -0.092650652613762 A34B-W39B -0.09507603685541 A34E-W39E -0.0950796551985165 V25D-V29A -0.0958276784549252 L38D-A32A -0.0959183504612424 V28D-V33A -0.0982790393568066 V25A-V33A -0.0994932027457167 V25D-V33D -0.0994971173077607 I24D-V33D -0.100224117342604 I24A-V33A -0.100320754290287 T27D-A26A -0.100801071352032 T27D-A30A -0.101769808477282 A26E-V33E -0.102181939934706 A26B-V33B -0.102232774685739 F27B-A30A -0.105953457171945 A30D-F27E -0.105970516608795 V29A-L38A -0.106170343249294 V29D-L38D -0.106201723104398 I28B-V36B -0.110602251896132 I28E-V36E -0.110659886367005 I24D-I31D -0.11446192687087 I24A-I31A -0.114480901867976 F27B-V36B -0.1183182784402 F27E-V36E -0.118319155884876 F27B-V25A -0.118644138603338 V25D-F27E -0.11877326379072 V33E-V38E -0.121218379874129 V33B-V38B -0.121640135548995 F27B-V29A -0.124980634897988 V29D-F27E -0.12498747150676 I24D-A30A -0.127308203687708 H34D-A32A -0.131013769029238 L38D-V37A -0.138128900836382 V25D-A32D -0.145997602228051 V25A-A32A -0.146003252818169 I29E-L37E -0.146035243728968 I29B-L37B -0.146070912094103 H34A-A40A -0.146739317896424 H34D-A40D -0.146742886355511 V33E-W39E -0.147531687616276 V33B-W39B -0.147670149139044 V28A-A35A -0.149084731737152 V28D-A35D -0.149085619580551 A30D-I31A -0.149292534012157 A31B-I31A -0.150857863439894 I31D-A31E -0.15086455543858 A26A-V33A -0.15107037962795 A26D-V33D -0.15107440280314 I24D-V29A -0.155893656062335 V29A-A36A -0.160222347676421 V29D-A36D -0.16022272863799 V28D-A32A -0.162209961682019 L30E-L37E -0.162936352525358 L30B-L37B -0.162944097132348 A32A-A39A -0.166099431502798 A32D-A39D -0.16613098461771 I31D-A30A -0.172482833745756 A35D-A35A -0.172636145796717 F27E-A34E -0.1735095592287 F27B-A34B -0.173516230307063 I31A-V37A -0.175281089266209 I31D-V37D -0.175310962058275 I31A-L38A -0.17926175333794 I31D-L38D -0.179282864563191 L30B-W39B -0.184321864976937 L30E-W39E -0.184360694641803 T27D-V28A -0.189743292865635 S25E-A32E -0.198567213932352 S25B-A32B -0.198569445316424 I29E-V36E -0.199797635859497 I29B-V36B -0.199797834879427 I24D-I24A -0.20304667235192 S25E-A31E -0.205134446303404 S25B-A31B -0.205195269237273 T27D-V25A -0.205775856235048 V37D-W41E -0.206830870010232 W41B-V37A -0.206850545606612 A39D-A40A -0.207116137551073 A35D-A32A -0.211855015840084 A34B-W41B -0.213877639095575 A34E-W41E -0.213894588432784 A31E-L37E -0.218228411512323 A31B-L37B -0.218239723364679 T27A-V33A -0.218380503223108 T27D-V33D -0.218392520605293 A26B-A32B -0.219005270835224 A26E-A32E -0.219067087997844 A32E-W39E -0.219955792531138 A32B-W39B -0.219963721914808 I31D-A36A -0.220385669791964 V28D-V28A -0.222888653712857 A39D-A36A -0.224389669599293 T27D-V29A -0.225902942778395 A32D-A32A -0.227533284229517 A32D-L38D -0.228887289077793 A32A-L38A -0.228917788523418 A30D-A36D -0.237547355940376 A30A-A36A -0.237573347121165 A39D-A39A -0.242416135789501 A26A-A32A -0.245742267690009 A26D-A32D -0.245759547791759 V25A-H34A -0.24962720764277 V25D-H34D -0.249638361616516 V28D-V29A -0.252431491738825 A32B-L37B -0.252572433275972 A32E-L37E -0.252735052989419 V28D-V33D -0.252889954532057 V28A-V33A -0.252984490177816 H34D-V28A -0.277537056956021 V33E-V40E -0.301721006121058 V33B-V40B -0.301724742573374 I28B-A34B -0.305079636293851 I28E-A34E -0.305244120615893 V33A-L38A -0.310806378548826 V33D-L38D -0.310892717687091 I24A-A30A -0.313943661277232 I24D-A30D -0.314106231523085 S25B-L30B -0.320452872476978 S25E-L30E -0.320477007946771 I28E-H35E -0.325788911800624 I28B-H35B -0.325866842460476 V28A-H34A -0.332013650150157 V28D-H34D -0.332015726749921 A35A-A40A -0.340406703836094 A35D-A40D -0.34047467052826 I24D-A26A -0.341983647528184 A32B-V38B -0.342651785667142 A32E-V38E -0.34269275220949 V25D-V25A -0.349767860085324 T27A-A32A -0.350014605813193 T27D-A32D -0.350087166958549 A34E-V40E -0.357593661972301 A34B-V40B -0.357651074318339 V33A-A39A -0.367873018354496 V33D-A39D -0.367888351283448 A30D-V29A -0.368773335515777 V29D-A35D -0.370508623994887 V29A-A35A -0.370549219056208 F27E-V33E -0.377202189893716 F27B-V33B -0.37721670064421 H35B-W41B -0.387699778174606 H35E-W41E -0.387702435939935 A26E-A31E -0.396758928188798 A26B-A31B -0.396812543924889 L30B-H35B -0.399564054752802 L30E-H35E -0.399623892745225 A31B-V36B -0.404288485497087 A31E-V36E -0.404369090608724 L30B-V36B -0.405618694059938 L30E-V36E -0.405638868349915 T27D-T27A -0.407149256280585 I31D-V33A -0.420846701122102 A30A-A35A -0.423841849262907 A30D-A35D -0.423864100457712 V25A-A30A -0.423875835093177 V25D-A30D -0.42387896572636 F27E-A32E -0.428265858101247 F27B-A32B -0.428354009537103 A26A-I31A -0.434278259813546 A26D-I31D -0.434313208854568 I24D-V29D -0.453642792366851 I24A-V29A -0.453677598241314 I31D-V28A -0.464075625690554 V25D-I31D -0.46912420733264 V25A-I31A -0.46925873914884 I29B-A34B -0.476148125235948 I29E-A34E -0.476344673988942 I31D-A36D -0.476856745085962 I31A-A36A -0.476866387779949 I28E-V33E -0.479091022723972 I28B-V33B -0.479119330341192 I29B-H35B -0.479506441837023 I29E-H35E -0.479577115945117 H34D-A39D -0.51258314081208 H34A-A39A -0.512583815649575