[Wed Aug 24 17:33:10 2016] >Input file: TM1O5WATD.pdb >TM segments: A500-517 MAIDEN score = -6.3956 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- T509A-L514A 0.234358763840779 G506A-L513A 0.233515958937968 G500A-V507A 0.130681076708004 K503A-V511A 0.11067844817811 T509A-V517A 0.0836988090450115 L502A-A512A 0.0730613417357864 G506A-V511A 0.0577954185370988 I504A-L513A 0.0482563264543856 S510A-C515A 0.0449434431511064 L502A-S508A 0.0448853596124685 G500A-S508A 0.0425965685419523 L502A-S510A 0.0303319922054484 V507A-C515A 0.022830723410924 L501A-V511A 0.0120840846068533 G506A-L514A 0.0116841379093193 T505A-L514A 0.0104525919335292 T505A-C515A 0.00933219233120264 T505A-V511A 0.00217776388737434 G500A-T509A -0.0026989266903612 K503A-S510A -0.0114107317316074 S508A-F516A -0.0170350750380508 I504A-A512A -0.0555968725235561 T509A-F516A -0.0614053623033985 V511A-F516A -0.0645378499949629 L502A-V511A -0.0720457122169229 G506A-C515A -0.0863832071605035 S510A-F516A -0.0905770845628509 G506A-A512A -0.0973503862879026 T505A-S510A -0.0996294578065391 L501A-G506A -0.10007296711799 S508A-V517A -0.103900623690803 I504A-T509A -0.108363030680652 G500A-G506A -0.114661610143906 T505A-L513A -0.126729589318886 L501A-T509A -0.130049510472265 V507A-F516A -0.130405355801597 K503A-S508A -0.152852027026507 K503A-A512A -0.154146085894613 T505A-A512A -0.169407371369415 I504A-S510A -0.179878718455444 L501A-S510A -0.181503924544574 V507A-L514A -0.198124558223885 L501A-S508A -0.1983732152966 I504A-V511A -0.201491593104496 L502A-T509A -0.218774006586513 K503A-T509A -0.229271351826087 L502A-V507A -0.237074741806882 S508A-L514A -0.268191128591078 S508A-C515A -0.275800393448345 S510A-V517A -0.300142365572618 S508A-L513A -0.341600660317864 V511A-V517A -0.345669877382451 G500A-T505A -0.360290249454439 V507A-L513A -0.360795835875328 L501A-V507A -0.401967433314413 V507A-A512A -0.443766508000779 A512A-V517A -0.450594499621026 T509A-C515A -0.45638968239003