[Wed Aug 24 17:34:42 2016] >Input file: TM1OQWATD.pdb >TM segments: A3-21 MAIDEN score = -10.8794 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- E5A-V10A 0.230823088588276 I12A-I19A 0.139562630550816 E5A-I13A 0.119867970690524 V9A-L16A 0.0894907697842742 V9A-A17A 0.0732515846623603 L6A-G14A 0.0353593029867176 V9A-A18A 0.007926602594857 M7A-I15A -0.000950459700001183 V10A-A18A -0.011150035673535 A11A-I19A -0.0233646629056308 E5A-G14A -0.061258567821227 I12A-A20A -0.0632018465267796 A11A-A20A -0.0699874566223944 M7A-L16A -0.0732979546974004 L6A-I15A -0.0765405770956544 V10A-I19A -0.0802262971903893 L3A-I12A -0.0873345578231595 L6A-I13A -0.0973706355609316 L3A-A11A -0.0995129858820176 I4A-I13A -0.108578160618904 L6A-A11A -0.128694437195614 I13A-I21A -0.137049749683626 E5A-A11A -0.140957235755076 I8A-I15A -0.145183217625251 M7A-G14A -0.152753249782308 I8A-A17A -0.154717602428692 V10A-A17A -0.154808236545665 E5A-I12A -0.155077766018351 I12A-I21A -0.162362018562421 I8A-L16A -0.164609322486221 G14A-A20A -0.1769886708579 V10A-L16A -0.19339031178247 I13A-A20A -0.194812956918142 A11A-A18A -0.196453832777524 G14A-I19A -0.198883483707684 I8A-G14A -0.205836497308656 I4A-A11A -0.208084562865793 A11A-A17A -0.220283412253657 L3A-V10A -0.224970760989445 I4A-I12A -0.241992515539584 V9A-G14A -0.242865613378587 G14A-I21A -0.250177364242358 A11A-L16A -0.254885475145792 L16A-I21A -0.259572223902959 I8A-I13A -0.277614632830022 V9A-I15A -0.296055068558037 I13A-A18A -0.327382190453658 I12A-A18A -0.344699431013469 I15A-I21A -0.351713927994456 L3A-V9A -0.352813548731461 I13A-I19A -0.353643137304282 M7A-I12A -0.364989994131101 L3A-I8A -0.384343394521455 M7A-I13A -0.406563704065668 L6A-I12A -0.417032563333291 I4A-V10A -0.442299833287382 I12A-A17A -0.452177502334878 V10A-I15A -0.458201311233649 I15A-A20A -0.459532016065873 I4A-V9A -0.468391893906707