[Wed Aug 24 18:23:55 2016] >Input file: TM1S5HCGD.pdb >TM segments: C497-526 MAIDEN score = -8.6509 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- BBeads pair Empirical energy ----------- ---------------- V502C-A507C 0.629666146238699 V515C-A520C 0.583468776139654 R498C-V503C 0.43877639508904 V506C-S511C 0.367928082008241 L519C-V524C 0.292751142881927 M505C-T510C 0.223000697078329 M505C-L514C 0.175509236534014 G508C-A518C 0.161636831452177 G513C-T521C 0.161458662887705 I509C-L514C 0.158860655303428 G508C-T516C 0.12953751874351 V503C-S511C 0.119674700488105 A518C-G525C 0.1085472959269 A518C-R526C 0.104538633778373 V502C-T510C 0.10324542863999 V504C-G513C 0.0897847659706379 A507C-V515C 0.0886920724991045 V503C-G508C 0.0775302522619938 V504C-I509C 0.0768749935841795 T521C-R526C 0.076404934985395 A517C-G525C 0.0607646768880699 R498C-V506C 0.0543351206718867 S511C-L519C 0.053936486173495 A501C-G508C 0.0525380550439749 V503C-G513C 0.0424156404862026 T510C-A520C 0.0318460671664753 V503C-I509C 0.0260834149436011 V504C-L514C 0.0183349459188413 M505C-G513C 0.00842006674457885 G508C-A517C 0.00505155998727513 G497C-M505C 0.00314086395699986 T516C-V524C 0.00311870422280869 I509C-A517C 0.0026022783658143 F512C-A520C -0.0133440923898118 F512C-A517C -0.015714563383824 I509C-A518C -0.019298402682267 A501C-T510C -0.0225167493520586 V506C-F512C -0.0244816519230096 G508C-L514C -0.0290350630423823 V506C-V515C -0.032653323924754 V515C-V524C -0.0350190084344446 G508C-G513C -0.0350632409154106 S511C-A517C -0.0386215560978229 L514C-A520C -0.0395468798580779 V515C-F523C -0.0410905698805957 A507C-T516C -0.0440215045592835 S511C-T516C -0.0456361540230166 A517C-W522C -0.0464181216697392 F512C-T521C -0.0480383835980147 T516C-G525C -0.0555571283004365 V504C-T510C -0.0652397259656583 V502C-S511C -0.0654459993929346 V503C-F512C -0.0655969295148706 T510C-V515C -0.0722612907679432 R498C-M505C -0.0742437801062428 F512C-L519C -0.0753634329853181 L499C-G508C -0.0826159894774463 G497C-V506C -0.0859696422533007 V500C-G508C -0.0883565198851226 A501C-I509C -0.0903567703982313 V506C-L514C -0.0903939686187885 F512C-A518C -0.0916322527850637 G513C-A520C -0.102048462496467 V504C-F512C -0.105879962512904 T510C-L519C -0.107175599142207 L499C-A507C -0.107702149937312 I509C-V515C -0.116225464275782 S511C-A520C -0.123183277498102 V502C-G508C -0.123683100432673 R498C-V504C -0.124328419418721 L514C-F523C -0.124817729031618 V500C-I509C -0.125828384335565 V515C-T521C -0.126412874989496 R498C-A507C -0.127947930460664 T510C-A518C -0.128569128731613 A517C-R526C -0.128728822332098 V506C-G513C -0.135393369022177 A517C-V524C -0.140744596742794 G508C-V515C -0.142422707399496 G497C-V504C -0.146874808547096 G513C-W522C -0.152026849079189 M505C-S511C -0.171977493288026 A517C-F523C -0.173580893997041 L514C-L519C -0.176117394804072 G497C-V502C -0.180645560729349 V503C-T510C -0.182950480234692 V502C-I509C -0.183595618977736 V500C-M505C -0.183678734423911 A520C-R526C -0.188473919850562 V500C-A507C -0.189547787467221 L519C-R526C -0.192330700455948 A507C-F512C -0.193716675868348 T510C-A517C -0.20145118287448 S511C-A518C -0.201954791266035 L519C-G525C -0.203541265308567 L499C-V506C -0.206442186908719 L499C-V504C -0.208815918843698 G497C-V503C -0.209205444896922 T510C-T516C -0.216081013001826 L514C-T521C -0.222366332815804 A501C-A507C -0.226122495798413 T516C-F523C -0.232178017300968 I509C-T516C -0.234158882696803 A507C-G513C -0.245897792595902 V504C-S511C -0.250539049151745 G513C-A518C -0.252254073216142 V500C-V506C -0.259690107880177 G513C-L519C -0.261357077157284 M505C-F512C -0.267523277785179 A507C-L514C -0.26913124382717 T516C-T521C -0.27072980618758 L514C-W522C -0.272196449011196 T516C-W522C -0.274661590050977 A501C-V506C -0.339776042760407 L499C-M505C -0.352558393465634 V515C-W522C -0.364722898041515 A518C-V524C -0.367626693134993 A520C-G525C -0.391705545328779 A518C-F523C -0.438552054427908