[Wed Aug 24 17:42:21 2016] >Input file: TM1WU0CGD.pdb >TM segments: A5-33 MAIDEN score = -3.1893 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- BBeads pair Empirical energy ----------- ---------------- V27A-E32A 0.659790427859378 G24A-R29A 0.436885174140737 V12A-L17A 0.391414786992698 A11A-A19A 0.376728438137947 L14A-A19A 0.35426143770621 L6A-A11A 0.294407212133014 G24A-E32A 0.292523370138602 I10A-G15A 0.290885136287276 A16A-I21A 0.274338861913333 A7A-V12A 0.24587541346305 A16A-G24A 0.229103914783684 L6A-V12A 0.207910693730314 G20A-S28A 0.182996270890087 G22A-V27A 0.182116472356103 G20A-I26A 0.176875853137817 I21A-I26A 0.176604093849325 G15A-N23A 0.140045953756579 N23A-E32A 0.12901081295987 I21A-V27A 0.128227365561714 G20A-L25A 0.126551489184221 A8A-A16A 0.125060745068236 G22A-T30A 0.122478927852205 I10A-A19A 0.119696169065518 L17A-I26A 0.11581239849461 L6A-A16A 0.106783801610371 L17A-N23A 0.103841909039792 A11A-G18A 0.100579904708951 G15A-G24A 0.0907883129121685 G22A-I31A 0.0863982817886304 G15A-I21A 0.0849244964967824 L25A-E32A 0.0805627951606471 L14A-G20A 0.0800369528780751 L25A-G33A 0.0781668972058109 I26A-I31A 0.0710417660817173 L25A-I31A 0.0663945623753831 A7A-A16A 0.0571106012919547 G13A-I21A 0.0567375677494613 A9A-G18A 0.0485275742474709 G13A-G22A 0.0459713332832572 G20A-R29A 0.0393484235861159 A19A-V27A 0.0379041672769347 A11A-G20A 0.035982755407975 A16A-L25A 0.0329350383978445 L6A-G15A 0.0311600807708352 G24A-G33A 0.0274999016269692 I21A-T30A 0.0265627753765738 G15A-L25A 0.0259010731640794 A8A-L17A 0.0246001613047744 I10A-G18A 0.0186789360098292 L14A-G22A 0.0179263070618134 V5A-G15A 0.00975600276927668 N23A-I31A 0.0093005118928926 L25A-T30A 0.00832051465805961 V12A-G20A 0.00643444853154129 A7A-G15A 0.00123748883641017 V5A-A11A 0.000776014157822358 G18A-I26A -0.00531604785828732 I10A-A16A -0.0178238900519236 V5A-L14A -0.0239084303030452 A9A-A19A -0.02613112731356 V12A-I21A -0.0321761834811813 I21A-R29A -0.032608816697832 G18A-S28A -0.0346028830113001 V5A-I10A -0.0410315085751218 G22A-R29A -0.0443883169467263 L14A-N23A -0.0464294509196925 S28A-G33A -0.0567892442986473 I26A-E32A -0.0699647147723552 G22A-E32A -0.075775506481651 V27A-G33A -0.0837021207696567 A19A-S28A -0.0840894174986788 V12A-G22A -0.0865976544140987 A8A-G15A -0.0880999505644575 A9A-L17A -0.08855953500855 G18A-V27A -0.0902974170281903 V12A-A19A -0.0985295697855038 V12A-G18A -0.101744994790991 V12A-N23A -0.102142219579827 I10A-G20A -0.107551086963763 N23A-S28A -0.110149805536339 A16A-G22A -0.111141971364987 G18A-G24A -0.118534053713273 G20A-V27A -0.119583734353717 G13A-G20A -0.122615348177681 G22A-S28A -0.125220077463341 I21A-I31A -0.125271695181312 A19A-L25A -0.128129871831041 A16A-I26A -0.129729543168984 L17A-G22A -0.13098573912006 V5A-G13A -0.137916677350056 L14A-I21A -0.142891502974025 G13A-N23A -0.143289150642142 L17A-L25A -0.153703205936953 L17A-G24A -0.154470818516133 G15A-G22A -0.16141488707526 G18A-N23A -0.162576495891344 G13A-G18A -0.175177788370708 G18A-L25A -0.175737008600148 L6A-G13A -0.177044217856092 A8A-L14A -0.181924451778224 A19A-I26A -0.182644577951431 N23A-T30A -0.187413928283853 A9A-A16A -0.191148995019877 G24A-T30A -0.210951931933857 A16A-N23A -0.224124400586846 L6A-L14A -0.22744907498224 G24A-I31A -0.244016063822718 A9A-L14A -0.246547082238687 G15A-G20A -0.246898034388324 G13A-A19A -0.249491116535415 A7A-L14A -0.257413503701932 N23A-R29A -0.258160254521058 A11A-L17A -0.266301644811769 A7A-G13A -0.270051251674561 A9A-G15A -0.271480528532116 A11A-A16A -0.275866537127838 I26A-G33A -0.298259152167364 I10A-L17A -0.340974123269878 I21A-S28A -0.346693329323185 V5A-V12A -0.352841788404211 A8A-G13A -0.440554645895567 A19A-G24A -0.46603686031134