[Wed Aug 24 17:47:14 2016] >Input file: TM1XRDATD.pdb >TM segments: A6-40 MAIDEN score = -11.2783 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I31A-E36A 0.647674997811752 L32A-R37A 0.594149480184262 I31A-R37A 0.384479293589871 L33A-F38A 0.350345103460176 D9A-L14A 0.301141013658685 V15A-F20A 0.243864450128514 L27A-T35A 0.241518926763131 P10A-L17A 0.234835288530451 A25A-F30A 0.232074139484734 L14A-T19A 0.202443555051094 G16A-L24A 0.201917553883998 D9A-G16A 0.201858296179875 A18A-A25A 0.144354128992106 Q6A-R11A 0.140268107475209 L17A-L26A 0.132068328670689 Q12A-F20A 0.111753591454412 I28A-L33A 0.111077821079058 F8A-V15A 0.110839926034418 R11A-T19A 0.108276503939656 F22A-F30A 0.10385047389956 D9A-L17A 0.103371921633881 V15A-L24A 0.0986147641110711 L26A-I31A 0.0959689498513865 L26A-S34A 0.0957184276114891 A25A-S34A 0.0883265092277696 Q12A-L21A 0.0867843117711669 L7A-L14A 0.0864249254824161 V23A-I31A 0.0840257527430541 L21A-F30A 0.0750625407389498 I31A-N39A 0.0724124054413595 F30A-F38A 0.0714435202224974 L14A-V23A 0.0708356166703297 Q12A-L17A 0.0661807026066441 F30A-N39A 0.065039167660629 L21A-L26A 0.0609215821189037 F20A-F30A 0.0593733351517622 L7A-A13A 0.0588828703850259 A25A-L33A 0.0569092189337546 Q6A-A13A 0.0483924503874548 F8A-L17A 0.0461280744077461 R11A-G16A 0.0445303232009735 F30A-W40A 0.0408443051636054 L21A-H29A 0.0399048637184087 F22A-I31A 0.0344611302221596 H29A-F38A 0.0311942458796302 A18A-L26A 0.0310591282400345 G16A-L26A 0.0273161901791146 I31A-W40A 0.0137592704972995 L32A-F38A 0.00871696867111371 Q12A-F22A 0.000876727639745667 L26A-T35A -4.16317401281674e-05 L24A-S34A -0.000869522627223347 V23A-L33A -0.00184276646270121 P10A-A18A -0.00367714223551108 A13A-L21A -0.00425344173440934 Q6A-L14A -0.00628874885149866 T19A-L27A -0.00714991398891485 F20A-H29A -0.0187711070893659 D9A-T19A -0.0320331660885875 L24A-L33A -0.0325326917963 L27A-L33A -0.0355243371679492 T19A-I28A -0.0369042575400584 L27A-E36A -0.0374643148767655 Q12A-T19A -0.0380576339613826 G16A-A25A -0.0400376034371401 F8A-L14A -0.0422392665189006 V15A-V23A -0.0471918065426005 I28A-F38A -0.0472955271957707 F8A-G16A -0.0474337321527716 A13A-V23A -0.0526831051892822 Q6A-V15A -0.0584878312440537 L32A-W40A -0.0589266886238127 L14A-F20A -0.0621447207047563 L27A-R37A -0.0632330109521595 R11A-F20A -0.0682958036101651 F20A-I28A -0.0729171719357575 T19A-L24A -0.0795754265998152 T35A-W40A -0.0797902958593192 F20A-L27A -0.0801107176451596 F22A-H29A -0.0835047079091682 L17A-A25A -0.0871545464425165 F30A-E36A -0.0941246452440989 L7A-V15A -0.103392793265708 S34A-W40A -0.104048736727124 V23A-L32A -0.10510043544591 S34A-N39A -0.11147896667533 D9A-A18A -0.115295413920546 P10A-G16A -0.123457773002642 H29A-E36A -0.128243149594135 L14A-L21A -0.129650836192767 G16A-V23A -0.133220207535313 A13A-F20A -0.133764998270697 A18A-L27A -0.141579059984568 A13A-T19A -0.142809473387191 H29A-T35A -0.144171116400935 L26A-E36A -0.151528175757339 A13A-F22A -0.154055976099905 L14A-F22A -0.154645350529726 I28A-R37A -0.155887604208613 H29A-S34A -0.15752630194961 L17A-F22A -0.159104694498533 I28A-S34A -0.162760244568361 H29A-R37A -0.166210788731972 I28A-E36A -0.167461557811986 A18A-V23A -0.168738114025576 L24A-L32A -0.168799289882964 F20A-L26A -0.173960972550686 L32A-N39A -0.178422947179816 G16A-F22A -0.182684625099341 H29A-N39A -0.186130348941461 L17A-L24A -0.187703323640408 L24A-I31A -0.197548750977426 F30A-T35A -0.198461873515206 L21A-I28A -0.20129505107062 L27A-L32A -0.206003360950646 T19A-A25A -0.213213405527299 Q12A-A18A -0.217657908949842 L24A-F30A -0.221692946169615 F30A-R37A -0.239105498987151 I28A-T35A -0.240793480935673 R11A-A18A -0.24618057473201 L33A-N39A -0.248212177077425 R11A-L17A -0.248270958206381 A25A-L32A -0.253397102168094 A18A-L24A -0.253898261017059 P10A-T19A -0.256010857373563 I31A-F38A -0.260460383299047 D9A-V15A -0.264218585764976 F22A-I28A -0.268756628188985 P10A-V15A -0.283223875921536 T19A-L26A -0.287369731007113 A25A-I31A -0.288443304446782 Q6A-Q12A -0.290173336494628 L26A-L33A -0.312215929197581 F8A-A13A -0.312653638904608 L27A-S34A -0.324978657822754 L24A-H29A -0.330164375810133 V23A-H29A -0.335589687251646 L33A-W40A -0.337439351600273 A13A-A18A -0.347123539805462 L17A-V23A -0.35024219655392 V15A-F22A -0.358820678595002 V23A-F30A -0.3612558240337 V15A-L21A -0.363908819862762 F22A-L27A -0.372133867648481 G16A-L21A -0.378836343820941 L21A-L27A -0.436896967921871 V23A-I28A -0.441495333933336 L26A-L32A -0.449327992075707 F20A-A25A -0.453967407487795 L7A-Q12A -0.476738470626657