[Wed Aug 24 17:17:50 2016] >Input file: TM2J8CCGD.pdb >TM segments: H2-21_M552-587_M642-657_M666-681_M725-747_M787-804_L270-288_L333-349_L354-367_L419-434_L456-483 MAIDEN score = -23.1904 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- BBeads pair Empirical energy ----------- ---------------- C349L-I354L 10 S558M-A567M 5.83483275251564 S552M-I572M 1.43723618460258 I792M-L428L 1.21647557021566 I465L-I470L 1.13220402393586 I572M-D459L 1.1239990463819 Y656M-T668M 1.06942681139998 E345L-I358L 1.05948503223875 F738M-H471L 1.04905495050185 L561M-N566M 1.02540006635672 S727M-V798M 0.98227909540873 K666M-A433L 0.954455085194549 F275L-W341L 0.919993723888975 L561M-Q568M 0.912135707120445 F456L-Y463L 0.88758020352356 N566M-I465L 0.852085566819764 G286L-C333L 0.835169352746229 F730M-V798M 0.835168137603476 L746M-H357L 0.833592119516137 L577M-W651M 0.830689989801123 I792M-A429L 0.812966052902764 G555M-L569M 0.808694453171446 V272L-R344L 0.801627211602872 F282L-C333L 0.800975101601477 L21H-W790M 0.798509693919934 H667M-L434L 0.79282679407524 L574M-D459L 0.781238015027911 I572M-L460L 0.779507839097853 F364L-V482L 0.746647409961656 P556M-A567M 0.734217130034415 L726M-V798M 0.72748719152531 F738M-L475L 0.726661264545444 W793M-A429L 0.721151634154761 V346L-Y356L 0.717727854263309 W652M-F672M 0.716996346906756 I745M-H471L 0.716282474344442 Y573M-V461L 0.708634460846489 F557M-L569M 0.676801264939386 A795M-L426L 0.671730627739372 F420L-L477L 0.671586732101666 F730M-L797M 0.664470880761929 F281L-C333L 0.660386873365476 F730M-M794M 0.659651475820759 S584M-F643M 0.659375780788746 W652M-A669M 0.654455793235902 T279L-A337L 0.649840734701241 F275L-L343L 0.649352753257343 V554M-L569M 0.645259529619532 F730M-A795M 0.645250501911643 L569M-Y463L 0.644527254176998 R458L-S464L 0.637302558124349 P571M-R458L 0.635629935933419 L731M-M794M 0.635342085895808 F421L-A481L 0.634901119697391 L731M-A425L 0.628929870123628 L560M-A567M 0.621367863255884 M587M-F643M 0.619361725004488 C349L-Y356L 0.618571452593418 I572M-V461L 0.616026450869647 L582M-A647M 0.615932416092953 H667M-F672M 0.610793541208213 A675M-V796M 0.606206597284539 F282L-A334L 0.60472753403438 F457L-S464L 0.602013538022298 P556M-G570M 0.592506932617501 R472L-L477L 0.590537123969856 F583M-A647M 0.588932037665076 S581M-S650M 0.586400361645092 C333L-F338L 0.581230775200186 I728M-V798M 0.576516867443571 T279L-F338L 0.575958272173704 Y271L-G276L 0.5712513331087 L577M-R654M 0.558816619756571 L580M-A647M 0.549288339874099 T744M-I358L 0.548676287035563 S727M-G802M 0.547580704756923 L580M-S650M 0.54671050076586 L746M-H471L 0.545131376141523 F738M-A743M 0.531288403441101 F280L-A337L 0.530766061139107 A735M-F421L 0.5245861366832 I465L-R472L 0.521846746662852 F564M-L468L 0.521512699676097 A342L-F362L 0.517466461405983 Q568M-Y463L 0.515173140177617 T744M-H357L 0.513763114508185 F738M-S478L 0.51165209929996 V339L-R344L 0.510895630345023 F281L-A337L 0.51064995310427 G555M-P571M 0.508762060722823 V796M-A425L 0.50626048232475 T668M-A429L 0.504812353193421 F421L-S478L 0.503650493917503 F275L-S340L 0.489015606335685 G276L-R344L 0.486921619204175 H741M-H471L 0.484325241085888 V646M-W651M 0.48419934016829 F364L-L479L 0.478192247487864 L736M-S478L 0.47467842739826 T279L-A284L 0.471072787274533 A729M-V798M 0.469373851273188 H788M-H431L 0.467969583672318 S734M-L428L 0.467312454300523 S584M-M644M 0.4599872315503 L569M-R458L 0.456369952202644 L731M-A795M 0.45584368421771 I728M-G733M 0.45009982593279 A791M-H431L 0.449176488269717 F280L-L285L 0.446141585378411 G742M-I470L 0.44382896345456 T744M-G355L 0.442959478287593 G276L-S340L 0.437569860641347 A743M-Y356L 0.436588429312931 L285L-C333L 0.435958569259025 F282L-A337L 0.42918415801719 T668M-L430L 0.427916611492102 A342L-F360L 0.42596207234909 S734M-A795M 0.425590813364973 R654M-L460L 0.425306061521685 L21H-R789M 0.423633428559781 W790M-A795M 0.422809767523994 S727M-Y732M 0.42196706712807 L731M-F421L 0.421094541225403 M740M-H788M 0.419094303096492 F282L-I287L 0.411630058382021 I787M-G432L 0.41072442469937 H788M-A433L 0.409916116381796 F421L-L477L 0.408812694881622 A743M-H471L 0.408805846965832 N424L-A429L 0.40641863399617 L343L-P359L 0.405559902170317 F564M-R472L 0.399845402877102 G273L-R344L 0.397133748049582 L569M-S464L 0.39709814985925 S734M-M794M 0.396268385028547 L678M-T799M 0.390685300004346 A365L-V482L 0.389762896915012 S674M-L797M 0.38900992808477 V796M-A429L 0.388438007577291 S581M-V648M 0.388255006835768 I348L-I354L 0.386779208255016 A739M-A791M 0.379190896176427 L574M-V579M 0.378589715773463 F564M-I465L 0.375741220038664 S727M-T799M 0.373156584655959 F364L-F483L 0.370800298023277 Y573M-G578M 0.370731032664935 S581M-W651M 0.366915223641274 L737M-A791M 0.366008246546455 T668M-L434L 0.364886718760064 S674M-V798M 0.364495442676074 F738M-L428L 0.364321544866579 A743M-L475L 0.363775520503048 S734M-H788M 0.362851468630053 L14H-Y19H 0.362591089401382 A795M-L428L 0.358350423150439 G578M-Y656M 0.357680302333925 A735M-N424L 0.356632790443684 S581M-L586M 0.351678398579354 S674M-L800M 0.350920851956074 F270L-C349L 0.350880177336584 A361L-L479L 0.348454709097101 F338L-I366L 0.348166043215086 V272L-V277L 0.347847790271085 W677M-L800M 0.346931649804299 S734M-A739M 0.34661946026725 A278L-A337L 0.345813197686985 L731M-V798M 0.345166527222615 T655M-L460L 0.343479728811242 I792M-A433L 0.341964806373745 N566M-P571M 0.340847008785332 S734M-A791M 0.340694312574072 A735M-L477L 0.340115643653911 F730M-A735M 0.340072765460276 K666M-A671M 0.339417456674184 A739M-I358L 0.337571637159861 K666M-S674M 0.333569418142495 L577M-S650M 0.330741004814647 L582M-M587M 0.329479412881241 T423L-L477L 0.328426743308154 G355L-A361L 0.328260329810238 A427L-G466L 0.327313639935486 Q568M-G462L 0.324948733502381 A669M-G432L 0.323650766577829 A729M-G802M 0.323409517404784 G585M-M644M 0.322764585420269 R458L-Y463L 0.320937992316276 G733M-M794M 0.320513222545052 S419L-A481L 0.318644045019507 F282L-G336L 0.317891991847824 L678M-G802M 0.317751702103866 L473L-S478L 0.316467053604421 A795M-G802M 0.316356021721222 G276L-A284L 0.316126217789219 S558M-L569M 0.314291788765408 N424L-H471L 0.313510481759117 W670M-M794M 0.313323024533707 M740M-L475L 0.310198836430574 A429L-G474L 0.309507432917896 A747M-H357L 0.309467254272431 G742M-G466L 0.309243956131332 H741M-S478L 0.308834541977073 A6H-G803M 0.308312070101984 L475L-S480L 0.30817521240987 Y732M-L737M 0.306589357786722 L726M-T801M 0.302828426856538 V579M-S584M 0.300960005283439 A342L-I358L 0.300468625312137 S734M-H431L 0.300000168909094 F274L-R344L 0.299846094455584 A361L-A481L 0.299703841202634 M740M-A361L 0.299363312274447 A743M-G469L 0.298362053487454 G432L-G466L 0.297506266247945 L726M-L797M 0.295860203395926 A739M-A481L 0.294386615748977 L678M-L800M 0.294295283122155 H357L-H471L 0.293168311215505 G432L-G474L 0.292469930990705 A735M-L479L 0.291961230086779 V346L-P359L 0.290857928119282 L580M-G653M 0.289944475134571 A427L-L473L 0.289746805584594 A675M-L800M 0.289692288979116 L430L-G474L 0.28863942043914 S734M-G742M 0.287571742475424 A739M-L479L 0.287317204269716 Y8H-G16H 0.286304118099283 S674M-V796M 0.285890031898071 M794M-L428L 0.285727674303939 G742M-A427L 0.284662263046872 L428L-A433L 0.284047874369397 A567M-G469L 0.283590964078176 F672M-W677M 0.282681462393901 L746M-R472L 0.281646230940074 V579M-D459L 0.281617502992156 A671M-L430L 0.279918893985895 L476L-A481L 0.279712741007419 G565M-L468L 0.27936833794685 L746M-G474L 0.279326252258491 G555M-N566M 0.278854151859972 G555M-Y573M 0.275928316481746 I792M-L430L 0.275183722363643 G276L-W341L 0.274937032261502 G742M-L479L 0.274421929426014 P556M-L569M 0.273732549769962 G742M-L475L 0.272880440277835 G575M-D459L 0.272589867333875 A747M-I354L 0.272247276243599 M740M-I745M 0.27065223738866 A743M-A361L 0.270206712372108 H357L-F362L 0.269863539858804 H667M-S674M 0.269293551174691 R789M-G432L 0.268497000329683 G578M-D459L 0.268071969973043 L430L-G466L 0.267861279620302 A671M-A433L 0.264294142594222 A743M-S478L 0.263677125019297 S734M-L426L 0.263583537758045 H667M-L428L 0.263378420457966 V646M-W652M 0.262683373531694 G742M-L428L 0.262560483145601 W563M-G466L 0.260608236306423 S4H-S9H 0.260434651679555 W563M-T467L 0.260279289179677 H741M-L476L 0.260251610553475 G273L-A342L 0.259081557322363 G585M-W649M 0.258523305423233 F456L-G466L 0.258477921444215 A363L-S478L 0.258045716617685 R654M-K666M 0.257018289441445 G733M-F422L 0.255488505139772 L580M-V646M 0.254918588271282 L673M-G803M 0.254730341008566 G575M-W651M 0.253344845894738 Y573M-L460L 0.252245950449147 M740M-N424L 0.251916909944216 G578M-S650M 0.250283665439353 A739M-L476L 0.249103446276936 H741M-L746M 0.249051067728377 G585M-W651M 0.247770529970766 P571M-V461L 0.247259358593394 G575M-L657M 0.244990069107071 L657M-H667M 0.244494100564143 G725M-L800M 0.243237520679529 E347L-P359L 0.241276765684355 S727M-A425L 0.240834018246272 L586M-F643M 0.239192890421725 A427L-I470L 0.23907628476113 L560M-G565M 0.238879763028264 N566M-L468L 0.237874296559847 S727M-L797M 0.237726155239466 Q568M-G469L 0.237638501921592 T559M-L569M 0.237601548109557 G653M-L673M 0.237350038045774 T655M-L434L 0.237324054545358 S581M-A647M 0.236704425837845 T423L-L479L 0.235746604206771 R789M-M794M 0.234662105488241 F275L-C349L 0.232041122602661 F275L-A283L 0.231015528466586 A361L-F483L 0.230110019796819 Y732M-A365L 0.2295150750925 A735M-L475L 0.229042797075338 T744M-E345L 0.228551693956832 L746M-G355L 0.228209522755199 G733M-H788M 0.228015782415577 N424L-G432L 0.227883995562615 F275L-F280L 0.227095040240384 L569M-G462L 0.226514342434169 W677M-G803M 0.225949659114731 H667M-W790M 0.225788620438445 T655M-K666M 0.225565938863723 F270L-E347L 0.225289015735139 H431L-L473L 0.22512675534255 F456L-V461L 0.224797464217178 F420L-S478L 0.224721523205127 L737M-P359L 0.224622839991609 H431L-S464L 0.224189960241008 F420L-S480L 0.223934013976503 G575M-S650M 0.223097834890513 F420L-A425L 0.222976438616495 S674M-A425L 0.222877055348907 H431L-L468L 0.222573219601383 N566M-G466L 0.222276273168042 F274L-A337L 0.220928909835293 G578M-W651M 0.218445251579114 G570M-G466L 0.217772479152983 V272L-E347L 0.217728025224162 T668M-H788M 0.217661931570095 I358L-A363L 0.217336475673556 Y732M-F364L 0.217066732694913 G276L-C349L 0.215374167943017 A427L-S464L 0.214600084898754 Y656M-A671M 0.213914564675445 G742M-H788M 0.213428480615672 G276L-E347L 0.212664815607059 T799M-I804M 0.212392060662051 F13H-I18H 0.212256501403484 T799M-L426L 0.211571799433709 M740M-I358L 0.211338741726133 F642M-A647M 0.210839461576223 S576M-G653M 0.207111348240351 L577M-T655M 0.206161958287647 A361L-L475L 0.206081386635264 M740M-F362L 0.205455960702361 S419L-A427L 0.205277693348705 G336L-W341L 0.204681536005547 N424L-G469L 0.20462734793416 N424L-S480L 0.203954065716213 L560M-N566M 0.203561145203861 P571M-G578M 0.203501414901423 F583M-F643M 0.202619811070318 L731M-T801M 0.202453372948034 E345L-Y356L 0.202398076419979 Y732M-F362L 0.202145847577003 F564M-Y463L 0.201723929120075 G742M-F360L 0.201516710019758 A283L-A334L 0.200861252851103 I676M-T799M 0.20047354206769 L731M-F422L 0.200273053988345 I676M-G803M 0.199735113101661 V579M-R654M 0.199458727371695 L569M-V461L 0.199191000829125 W652M-W670M 0.19906118341294 A791M-G474L 0.197914284601291 I287L-T335L 0.197620929874133 A337L-E345L 0.197442769820483 R789M-H431L 0.196299038780556 T799M-T423L 0.195649729405677 W649M-T668M 0.19532214870812 W341L-H357L 0.195043474469232 T744M-L468L 0.194105050566317 W790M-G432L 0.193664398645359 L5H-F10H 0.193609592489771 L797M-G802M 0.193470687848704 M794M-A425L 0.193343958592701 C333L-I366L 0.193048575332368 V579M-M644M 0.192958839075026 H741M-E345L 0.1924665913898 G562M-Y463L 0.192034315318698 W11H-T801M 0.192005933676101 L577M-M644M 0.191709787594772 N566M-R472L 0.191574384567624 N566M-R458L 0.191504882060637 A739M-T423L 0.191309819782585 L797M-N424L 0.190937292188994 H741M-R472L 0.190867182706254 W670M-T799M 0.190372240696558 F10H-A15H 0.189567430816744 G553M-I572M 0.188374213256849 Y732M-S419L 0.188049203340502 W649M-Y656M 0.187750970835342 F274L-V346L 0.18718683928453 G570M-V461L 0.187178337737143 G570M-D459L 0.186967528573797 V554M-I572M 0.18657569357166 A739M-A363L 0.18656588353735 Y20H-R789M 0.185880371522708 W670M-V796M 0.185328956813712 A791M-T423L 0.18407835665762 G742M-L473L 0.184044999124793 F730M-V796M 0.183836717528071 W341L-V346L 0.183592301430046 V796M-H431L 0.183200139628419 G742M-N424L 0.183146727525639 Y732M-F421L 0.18288701460235 F557M-G565M 0.181943658925691 H741M-P359L 0.181602246930196 F282L-F338L 0.181116877224833 G585M-A647M 0.180935660566396 N424L-L430L 0.180430495561783 T423L-H431L 0.180345928952086 M587M-S650M 0.17963623534881 R654M-W670M 0.179412229473111 G575M-G585M 0.179379737949116 G553M-L460L 0.179191352132035 K666M-F456L 0.179142104432861 T744M-G469L 0.178874910085815 G653M-A669M 0.178738501568552 H431L-I465L 0.17849331926587 S552M-S576M 0.178362714925364 F583M-M644M 0.178114380500979 A671M-R789M 0.178042766906649 L731M-G474L 0.177640882875284 Y573M-S650M 0.177331482984324 V681M-G803M 0.177320933510703 G578M-M644M 0.176713908534186 A747M-R472L 0.176024062577127 L560M-S464L 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