[Wed Aug 24 17:39:03 2016] >Input file: TM2M7GCGD.pdb >TM segments: A3-52 MAIDEN score = -9.4864 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- BBeads pair Empirical energy ----------- ---------------- K30A-A35A 0.913161309223888 L47A-A52A 0.530876731851393 E5A-V10A 0.492414525540303 V9A-G14A 0.430917330277934 Y32A-S37A 0.421375994597123 S38A-L43A 0.402473287484887 R41A-A46A 0.345228502029466 I13A-A18A 0.301681353893784 I15A-A20A 0.301617123812629 I21A-A26A 0.299990495265373 I19A-F24A 0.286048135149349 L6A-A11A 0.279954068000193 S38A-A46A 0.279041427578088 N42A-S49A 0.263321048379855 A36A-K44A 0.222415581528642 V29A-S34A 0.219658720192093 G14A-I21A 0.217797529046047 R28A-A36A 0.21717234133421 L6A-G14A 0.203161122309455 Q23A-R28A 0.199912974076846 F24A-V29A 0.198907668143822 N33A-R41A 0.196461546862472 I8A-G14A 0.196048972753023 I8A-I13A 0.192884374104784 N33A-D39A 0.179208957017038 K30A-D39A 0.171188549857734 R41A-S49A 0.157204627199129 N33A-N42A 0.147517903156108 A20A-R28A 0.141179651308323 S25A-S34A 0.134389672455909 N42A-L47A 0.117430481870762 Y27A-A35A 0.117262250657236 V29A-S37A 0.112101626947527 S25A-N33A 0.111414969162711 I12A-I19A 0.108869385238843 A36A-L43A 0.108791890468584 D39A-L47A 0.103307032040776 A31A-A36A 0.100136556168264 T45A-A50A 0.0943152924206281 L7A-A17A 0.0868356511495714 R41A-E48A 0.0845588994992106 Y27A-A36A 0.084487358638055 V10A-A18A 0.0817606146051295 I21A-A31A 0.0757811746955293 I8A-A18A 0.0708049457895767 D39A-K44A 0.070476428075874 A18A-A26A 0.0697452396805573 A31A-D39A 0.069236266488085 E5A-A11A 0.0682318824768937 A11A-I19A 0.0648410075290231 I15A-P22A 0.0620480908392143 A26A-S34A 0.0587685420852067 A26A-A35A 0.0580279696629153 F24A-K30A 0.0557866458752072 N42A-A50A 0.0552551427213117 L6A-I15A 0.0478205573068546 D39A-A46A 0.0431852097159169 Y27A-S37A 0.0423810703338789 L3A-I8A 0.0417290888840087 V10A-A20A 0.0414597859631769 S34A-N42A 0.0394491091665712 E5A-G14A 0.0363296965776443 L7A-I12A 0.034416065152997 L43A-A52A 0.0330068379692101 V10A-I15A 0.0304342345504915 F24A-N33A 0.0275466275374852 A17A-S25A 0.0242264263635401 K44A-S49A 0.0238712672703338 I15A-F24A 0.0226961326800996 L43A-E48A 0.0211877179070852 A26A-A36A 0.0173712820689209 V9A-A17A 0.0159663332826698 Q23A-Y32A 0.0145307389423639 S34A-R41A 0.0133618410024634 A18A-S25A 0.0124982476202966 G14A-Q23A 0.00989574873423127 P22A-A31A 0.00852446962383768 I15A-Q23A 0.00545273100234001 G14A-P22A 0.00535955390737408 I4A-V10A -0.000317960367734571 K30A-S38A -0.000911181828276764 I12A-A17A -0.00343229162420577 I12A-A20A -0.00365027562320996 L3A-A11A -0.0120107063813792 A36A-R41A -0.0124304023761738 P22A-K30A -0.0131406647988026 A20A-V29A -0.0134285564063168 I8A-A17A -0.0146786438528126 Q23A-A31A -0.0153433815117583 A36A-T45A -0.0163020354733545 V10A-L16A -0.0169573759194712 R41A-L47A -0.0170858426817269 L40A-E48A -0.0191561178836858 S38A-E48A -0.0203484596387269 F24A-S34A -0.0217576056057514 A17A-A26A -0.0223190537876188 I8A-I15A -0.0225719208114965 S25A-K30A -0.0232566970464481 S37A-K44A -0.0237614864152249 V9A-A18A -0.0253691750884417 S37A-T45A -0.0318348404267911 I4A-V9A -0.0320687435250386 K44A-A50A -0.0323052604501708 Y27A-Y32A -0.0326321586893215 Y32A-S38A -0.0365005474839424 A20A-S25A -0.0435633764263041 R28A-S37A -0.0448541498121829 A36A-N42A -0.0451946467806379 A18A-Q23A -0.0461459037454614 I13A-I19A -0.0467318706624411 I4A-G14A -0.0486829566117306 K30A-L40A -0.0502744629486848 S37A-A46A -0.0553472073554957 V10A-I19A -0.0567392606900343 A26A-N33A -0.0589480711874117 P22A-Y27A -0.059035106053912 V29A-S38A -0.0594068039227822 S34A-L43A -0.0596684862029526 S38A-L47A -0.0597730017227294 K30A-S37A -0.0616088846598577 S25A-A31A -0.063658531671952 F24A-A31A -0.0636891828807009 A35A-N42A -0.0691825971702942 S34A-D39A -0.0710522785991831 N42A-A52A -0.0717607814425298 E5A-I13A -0.0721739334146561 N33A-S38A -0.0730104567213372 A11A-A20A -0.0743257135977495 R41A-F51A -0.076948457747383 Q23A-N33A -0.0785152885489255 A18A-Y27A -0.0791800655731423 V29A-A35A -0.0806290334538353 Y32A-R41A -0.0808383133422044 R28A-S38A -0.081671718249622 A20A-Y27A -0.0818249693261776 L3A-I12A -0.0829508250017792 T45A-F51A -0.0845743630243749 G14A-I19A -0.0846861647627986 L16A-S25A -0.0859743152178067 L16A-I21A -0.0864897495818031 I13A-P22A -0.0887824926805747 R28A-S34A -0.0921684808964428 S38A-K44A -0.0954336738609116 N42A-F51A -0.100190385540639 R41A-A50A -0.100449314643246 I21A-Y27A -0.101046891365006 A18A-F24A -0.102422274505601 Y32A-L40A -0.10255533900063 A35A-L43A -0.104588776890416 A46A-F51A -0.105126923186884 A20A-K30A -0.107219422074684 K30A-A36A -0.111082373728011 Y27A-N33A -0.114888583889491 I4A-I13A -0.116096782314117 S37A-N42A -0.11736273426602 I12A-A18A -0.120481828940651 D39A-T45A -0.120973929604857 A31A-L40A -0.12160209996528 L3A-V9A -0.123104976506966 T45A-A52A -0.124682627846559 L16A-F24A -0.124835498049037 R28A-N33A -0.125186503545931 I21A-K30A -0.126106572820365 A35A-K44A -0.126801582889539 L7A-I13A -0.13117993841888 I8A-L16A -0.13687146737268 I12A-I21A -0.138054780259187 S34A-L40A -0.139371701815259 L7A-G14A -0.142118642888914 I19A-A26A -0.143214374480211 Y27A-S34A -0.144735634644607 L7A-I15A -0.147389182425548 L7A-L16A -0.151582639832096 D39A-E48A -0.151888589814269 N42A-E48A -0.154253491153823 L40A-L47A -0.156020842902158 A11A-A18A -0.15984961017999 A17A-F24A -0.16104878120889 F24A-Y32A -0.163391566412532 L43A-F51A -0.163827537718026 E5A-I12A -0.171167325786115 A26A-Y32A -0.171724337184126 L43A-A50A -0.17177927752754 I19A-R28A -0.173899252193717 Y32A-D39A -0.179169977995994 I21A-V29A -0.18335257495898 L40A-S49A -0.186186791874567 A26A-A31A -0.186500895163274 L43A-S49A -0.186522630327913 N33A-L40A -0.18895596553506 R28A-A35A -0.192694475063113 A31A-S38A -0.19290553427162 A46A-A52A -0.196463149238771 K44A-F51A -0.19984726324964 A35A-R41A -0.201068141773295 I19A-Y27A -0.203404475086238 A17A-Q23A -0.205286836130872 Q23A-V29A -0.206539649148068 V29A-D39A -0.209596391915532 V9A-I15A -0.210259241352272 P22A-V29A -0.217233619740827 Q23A-K30A -0.220933037523982 A11A-A17A -0.222804825379122 I13A-I21A -0.225069279860933 A31A-S37A -0.227752914523396 A20A-A26A -0.227849838672915 S38A-T45A -0.22802225216504 L16A-Q23A -0.233924271868834 G14A-A20A -0.237220142397762 I4A-I12A -0.241316246417325 S25A-Y32A -0.245040637056364 L3A-V10A -0.249627921034294 A35A-L40A -0.251088742310087 V9A-L16A -0.26974115444279 L6A-I12A -0.270381467923826 I4A-A11A -0.27762773895731 A11A-L16A -0.279389065400443 L40A-T45A -0.297939807493337 L40A-A46A -0.309388830583337 L6A-I13A -0.311586833824567 K44A-A52A -0.314495507797536 I15A-I21A -0.3224341189396 S37A-L43A -0.325161935255582 I13A-A20A -0.335180269231527 I19A-S25A -0.342636401049905 V10A-A17A -0.344002387500821 V29A-A36A -0.36701636816692 L16A-P22A -0.369869217454896 A17A-P22A -0.375289721153719 I21A-R28A -0.406047917462483 P22A-R28A -0.488485418994119