[Wed Aug 24 23:55:18 2016] >Input file: TM2MFRATG.pdb >TM segments: A19-41 MAIDEN score = -10.6269 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- S36A-L41A 0.190845184278786 S31A-L39A 0.16027287914359 F26A-V33A 0.116254785810728 G22A-V27A 0.11549565603613 V33A-Y38A 0.111939096997615 V33A-F40A 0.109963687632941 F30A-L39A 0.0751156549959902 G22A-F30A 0.0606916369110007 I20A-I25A 0.0539979528006764 L29A-S36A 0.0392874971759927 P23A-S31A 0.0287875917175109 I19A-V27A 0.0158805176850864 F28A-Y38A 0.0147726199399827 F28A-S36A 0.00972157847297198 F26A-I34A 0.00763175422442952 P23A-F30A -0.00388126565209879 V32A-F40A -0.00598436235285327 I20A-F26A -0.00684048150354188 I19A-L24A -0.00834959759616538 V32A-L39A -0.00884245330446554 F28A-I37A -0.00970203798259206 V27A-S36A -0.0190000689489654 S31A-F40A -0.0193352029735263 I20A-F28A -0.0197240931146148 G22A-S31A -0.0238280420191068 I25A-V33A -0.0273078678654528 I34A-L41A -0.0333610569271778 I19A-F26A -0.046307453005813 P23A-V32A -0.0585465200847746 F26A-G35A -0.0693710785022965 G35A-F40A -0.081710783858215 F30A-S36A -0.0864036179562921 I19A-F28A -0.0867843249709843 V32A-L41A -0.102810274618876 S31A-I37A -0.105900193792721 L29A-I37A -0.106659671979942 V27A-G35A -0.106931044990315 L24A-V33A -0.111189969099796 I21A-F30A -0.112407338059626 S31A-Y38A -0.11524145140725 F28A-G35A -0.11883818412624 G22A-L29A -0.122080286053853 V27A-I34A -0.139651615667495 I25A-I34A -0.145829226245594 F30A-Y38A -0.153691451045757 I21A-L29A -0.159499974976643 I25A-V32A -0.162116518684907 V33A-L39A -0.170773243226209 G22A-F28A -0.170954341232376 P23A-F28A -0.171678571870568 S31A-L41A -0.188759821420607 V32A-I37A -0.19053128923192 L29A-Y38A -0.191483948767985 L24A-F30A -0.203094543405649 I21A-F26A -0.20975092572121 I34A-F40A -0.214206051869301 F30A-I37A -0.215613031512752 F26A-S31A -0.215909031147242 L24A-S31A -0.219323169197054 I20A-V27A -0.220302339432227 V33A-L41A -0.232174546197851 I21A-F28A -0.232856794082077 L24A-V32A -0.23374841772586 G35A-L41A -0.240419811195805 F30A-G35A -0.247053622233867 F28A-I34A -0.255899130398365 F28A-V33A -0.287242193354522 V27A-V32A -0.292596264101808 L29A-G35A -0.30193747309874 L29A-I34A -0.314048563146674 V32A-Y38A -0.316503223150719 I25A-F30A -0.320821446961144 V27A-V33A -0.342041707581297 I25A-S31A -0.353104369769851 F26A-V32A -0.36012458063003 I19A-I25A -0.378116997900154 I34A-L39A -0.379454664058563 S31A-S36A -0.395966377889771 P23A-L29A -0.404265239953267 L24A-L29A -0.419614860323373 I21A-V27A -0.469090353775113