[Wed Aug 24 23:55:27 2016] >Input file: TM2MFRCGG.pdb >TM segments: A18-42 MAIDEN score = -6.7980 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- BBeads pair Empirical energy ----------- ---------------- V33A-Y38A 0.464509039848534 K18A-P23A 0.436169072467342 V33A-F40A 0.184741534372615 S31A-L39A 0.152504702497723 V32A-I37A 0.148894235461716 S36A-L41A 0.139973307007455 I20A-I25A 0.132902288485022 I25A-F30A 0.127513939847759 P23A-S31A 0.127416176306417 K18A-F26A 0.117747692208181 F28A-V33A 0.108623897126732 I37A-R42A 0.103589419809367 S31A-I37A 0.0840066753547233 F26A-V33A 0.0822070090219373 F28A-Y38A 0.0744341087006717 S36A-R42A 0.0679438210051289 V32A-L39A 0.0617247074027487 F28A-I37A 0.0616273922966719 K18A-L24A 0.0615048877563691 I34A-F40A 0.0552538918063659 I34A-R42A 0.0523892877779424 G22A-S31A 0.0505468963443723 F28A-I34A 0.0429005165726415 L24A-F30A 0.0331024915283162 V27A-V32A 0.0318666329833803 I34A-L39A 0.0313705242188682 V32A-F40A 0.0235336338461496 L29A-I34A 0.021856005495386 I19A-F26A 0.0189656376749868 I19A-V27A 0.0162444565606628 F28A-S36A 0.014237970462581 L24A-L29A 0.0135274564511612 G35A-R42A 0.0114698084249 G22A-F30A -0.00780259293011643 I20A-V27A -0.0138759187483748 P23A-F30A -0.0167704344844357 I20A-F28A -0.0243395229271579 L29A-S36A -0.0679151857969185 F30A-L39A -0.0715437984888823 P23A-V32A -0.0734250248585722 F26A-I34A -0.0759690689762751 S31A-F40A -0.0764327493016518 V27A-S36A -0.0775063384618215 I19A-F28A -0.0812606528514599 P23A-F28A -0.0847449299487968 L29A-I37A -0.0949387168319629 K18A-V27A -0.0957505663763802 F30A-S36A -0.0971667074425692 I25A-S31A -0.104466093139935 V32A-L41A -0.104916495057456 L24A-V33A -0.105126462971875 G22A-L29A -0.109339937037626 F26A-G35A -0.114022606694981 V27A-G35A -0.123834269658493 F26A-V32A -0.126808742345041 G22A-F28A -0.133462116930564 G35A-L41A -0.135296741640015 I25A-V33A -0.136022585396217 K18A-I25A -0.136780409386962 G35A-F40A -0.138496604785456 I21A-F30A -0.143864307160073 F28A-G35A -0.148034361105201 F30A-Y38A -0.149971396886507 S31A-L41A -0.151012498674586 L29A-Y38A -0.15317284391242 K18A-F28A -0.156873829780457 I21A-V27A -0.163002911389253 I21A-L29A -0.164994528248084 I25A-I34A -0.167560399287969 I20A-F26A -0.175476188252632 I25A-V32A -0.176264724996683 I21A-F26A -0.195880810721434 V27A-I34A -0.201435721759008 L29A-G35A -0.208841702474843 I21A-F28A -0.209480879719326 V33A-L41A -0.216615997498191 L24A-S31A -0.219629743673881 V27A-V33A -0.227776911379744 L24A-V32A -0.228589614192202 F30A-I37A -0.230279156358761 F30A-G35A -0.237820965340422 I34A-L41A -0.240938768261715 S31A-Y38A -0.243820843883394 G22A-V27A -0.244869148825666 F26A-S31A -0.261038478591146 V32A-Y38A -0.268317600791667 V33A-R42A -0.281214193155577 S31A-S36A -0.366496783280748 I19A-I25A -0.366766509758396 I19A-L24A -0.369432596526659 V33A-L39A -0.387760823017759 P23A-L29A -0.568077462558205