[Wed Aug 24 17:20:54 2016] >Input file: TM2MKVCGD.pdb >TM segments: A26-51 MAIDEN score = -4.5170 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- BBeads pair Empirical energy ----------- ---------------- S45A-S50A 0.522259718444692 L41A-R46A 0.399873066167191 L44A-R49A 0.329151289548586 S45A-G51A 0.288969457168626 G33A-L40A 0.283599460189568 L44A-G51A 0.266796466291493 N26A-G33A 0.238892498347571 A32A-G39A 0.231402369246351 V38A-S45A 0.198767607260383 F31A-V38A 0.157715889091477 L43A-G51A 0.153291556637166 N26A-L34A 0.119903057662186 I42A-R47A 0.103265491410518 F31A-L40A 0.0890422668293211 I30A-I37A 0.0859815774878436 F36A-L44A 0.0751986868703511 L40A-R47A 0.0696336777055551 L34A-L41A 0.0676851342929776 L34A-I42A 0.065081135143779 A35A-L43A 0.0492527373460243 A32A-L40A 0.0326231939230511 L41A-R49A 0.0310686827190718 L43A-F48A 0.0300789674474986 G39A-R47A 0.029804175368195 L40A-F48A 0.029668495387658 I30A-V38A 0.0229463658406586 F31A-G39A 0.0146924208581121 A35A-I42A 0.0140513483933251 I30A-A35A 0.00596414848832438 A35A-L40A 0.00316798260175188 L29A-F36A -0.00519364045915793 G39A-R46A -0.00692750781545071 I42A-R49A -0.0071198167169646 G27A-A35A -0.00800246506991487 G27A-L34A -0.0120483440889725 L29A-I37A -0.0126272682563968 V38A-R46A -0.0158574205514617 I37A-S45A -0.015925126599809 L29A-V38A -0.0206551712122369 I42A-S50A -0.0236799890733753 R46A-G51A -0.0238042166287036 V38A-L43A -0.0271285145448594 G33A-L41A -0.028688136737137 L40A-S50A -0.0292364845232047 G33A-I42A -0.0408913704519662 N26A-A35A -0.0456098487423602 G27A-F36A -0.0523567492421393 L29A-A35A -0.054834733807569 G28A-F36A -0.0550201797920151 I30A-G39A -0.0572656906555959 I37A-L44A -0.0695623672417423 G39A-L44A -0.0737233181553041 G28A-A35A -0.0746566529029899 L41A-S50A -0.10117398003518 L40A-S45A -0.101573826365083 F36A-L43A -0.103416378847278 N26A-A32A -0.107467786708584 N26A-F31A -0.109092944198612 G28A-I37A -0.11159740980023 G27A-G33A -0.11832581859801 G33A-G39A -0.126020813913423 L41A-F48A -0.128513560803118 G39A-S45A -0.147590634389616 V38A-L44A -0.162743716327323 I37A-I42A -0.173818485890344 F36A-L41A -0.17953789800479 L40A-R46A -0.21210947221903 I42A-F48A -0.218432127584956 G33A-V38A -0.228605994148595 L34A-L40A -0.23306745103834 L43A-R49A -0.23972398221301 L43A-S50A -0.240158270396439 G27A-A32A -0.248189194910575 A35A-L41A -0.24911631251434 F31A-I37A -0.251816674645085 I30A-F36A -0.26649108375544 F36A-I42A -0.267496865341869 L41A-R47A -0.280998345610903 G28A-L34A -0.290366272513948 L44A-S50A -0.29208105146797 A32A-V38A -0.311966648107077 I37A-L43A -0.321748680235571 G28A-G33A -0.351554729236073 L34A-G39A -0.386535377634042 A32A-I37A -0.388069285835655 F31A-F36A -0.407356718265309 L29A-L34A -0.409303274754281