[Wed Aug 24 17:22:10 2016] >Input file: TM2MMUATD.pdb >TM segments: A53-94 MAIDEN score = -6.5320 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L86A-R91A 0.428479225126448 T84A-T89A 0.337344564130159 I77A-M82A 0.287565581222324 N74A-M82A 0.277470553723846 T89A-L94A 0.236173706608306 L53A-P72A 0.176229535360006 L87A-W92A 0.149218383303384 Y75A-G85A 0.125009158969402 L53A-W73A 0.119482038688929 P72A-A80A 0.110100080386597 L53A-A78A 0.0967813637266972 G71A-A80A 0.0843283393526733 A78A-L86A 0.0840250096482273 M82A-M90A 0.0812797655085811 I77A-L86A 0.0757087033905566 A80A-L88A 0.071192835336169 L87A-H93A 0.0704104864725239 F81A-L87A 0.0669896578321678 L53A-A76A 0.066216263527787 A78A-I83A 0.0532480730155243 I83A-R91A 0.0511665623646147 F79A-L88A 0.0493957714861173 L86A-W92A 0.0423894602684047 L53A-N74A 0.0419212266768594 N74A-F81A 0.0368898340140884 I77A-G85A 0.0327164630705536 F81A-T89A 0.0265854276578893 A78A-G85A 0.0248610087095678 L70A-A78A 0.0247356988295664 G85A-M90A 0.0110203227593567 L86A-H93A 0.0102376085345451 W73A-F81A 0.00644390160977343 A76A-G85A 0.00583973794422477 P72A-F81A 0.00408657143276137 A76A-T84A 0.00408001497263299 G71A-F79A 0.00292045140251851 A80A-T89A 0.00239918083121671 F81A-M90A -0.00123193207048322 Y75A-T84A -0.00454729008829124 F79A-L87A -0.0189283667662181 F79A-L86A -0.0216256875789202 Y75A-I83A -0.0263920910532205 W73A-M82A -0.0391149216895307 G85A-W92A -0.0445800740618807 T84A-W92A -0.0487595537128189 N74A-A80A -0.0500075801241004 G71A-A78A -0.050604010156948 N74A-F79A -0.0542793671029158 M82A-T89A -0.0546986885617402 P72A-I77A -0.0558458766848506 L70A-I77A -0.0786935614702131 W73A-A78A -0.0790632942102505 L70A-F79A -0.0824103884452212 L88A-H93A -0.0916406312186577 L53A-I77A -0.092314073008858 L53A-Y75A -0.0932939768312195 T84A-R91A -0.0974119779963192 N74A-I83A -0.108625112832335 F81A-L88A -0.108671710576055 A78A-L87A -0.120696157989708 F79A-T84A -0.12231847354523 P72A-F79A -0.125511154181449 Y75A-M82A -0.128660590623052 P72A-A78A -0.144680706106218 L70A-Y75A -0.147509783386075 A76A-I83A -0.149045789498496 L53A-G71A -0.156188824596603 L88A-L94A -0.156763498756634 I77A-T84A -0.158440030883833 Y75A-F81A -0.159693457562299 A78A-T84A -0.16154497631184 L70A-A76A -0.168198808318114 F79A-G85A -0.169029325714368 A80A-L87A -0.186663384508443 G71A-I77A -0.191937105931567 G85A-R91A -0.193112453152712 I83A-L88A -0.19754308611666 A76A-F81A -0.232372984925085 W73A-A80A -0.256849555647833 M82A-L87A -0.26305508811696 I83A-T89A -0.268965380823824 M82A-L88A -0.280467587916339 M82A-R91A -0.282127215913175 A80A-L86A -0.297153991695177 T84A-M90A -0.304638587380898 I83A-M90A -0.329280141067245 Y75A-A80A -0.330525167810904 I77A-I83A -0.353268828802565 F81A-L86A -0.384225644367761 A76A-M82A -0.391745041409354 L53A-L70A -0.407720631794892 W73A-F79A -0.415591338021383 A80A-G85A -0.483992509832566 G71A-A76A -0.484675037500705