[Thu Aug 25 00:06:45 2016] >Input file: TM2NRFCGG.pdb >TM segments: A6-21_A45-68_A84-98_A108-119_B191-208_B225-250_B266-278_B289-305_B319-332_B334-350 MAIDEN score = -65.5649 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- BBeads pair Empirical energy ----------- ---------------- A234B-G291B 10 I90A-I272B 1.05557426187625 H55A-I61A 1.01109699995648 I323B-W328B 0.993147271383338 Y297B-I338B 0.858242999614307 H237B-I243B 0.845364310691656 W249B-V296B 0.775497235075574 L299B-W304B 0.753169261886999 A202B-D208B 0.727620516326988 M236B-F289B 0.699783477933948 W67A-V114A 0.694594617928065 D208B-H237B 0.674725849244375 L326B-A331B 0.667239498897266 S95A-G112A 0.652089481618928 M11A-L65A 0.651055154283419 M193B-L247B 0.642911507326564 A195B-L235B 0.638745935796128 V296B-G340B 0.631819532434629 W250B-V296B 0.630138382155383 A298B-L341B 0.629396723822735 W68A-V114A 0.628550794685922 I269B-A298B 0.626869712065896 S277B-G294B 0.624366250248834 N246B-V296B 0.618291913929103 V15A-A20A 0.612532645779809 M54A-L110A 0.60648603808121 M236B-L292B 0.605677799336584 I90A-S95A 0.598570704933615 I272B-S277B 0.587607821713453 G301B-V343B 0.578485241708244 F245B-W250B 0.577966636896223 A298B-L345B 0.562839307167422 I269B-V295B 0.554755121165845 F49A-L89A 0.550279806600105 M300B-L341B 0.547787907658862 H55A-H60A 0.545464801281219 I87A-V113A 0.541397668706479 D208B-F238B 0.535969940888537 F18A-L53A 0.530561573522056 S277B-I338B 0.527963800098503 V343B-A348B 0.527750726850856 A274B-V295B 0.518952770415297 F231B-A274B 0.518112796036798 Y230B-L275B 0.514340494813244 Y297B-G344B 0.509833379299074 F231B-L271B 0.508567388091308 F63A-W68A 0.508370479562197 H237B-H242B 0.50721264993619 N64A-V114A 0.503169465176525 I87A-A116A 0.503104962143663 Y302B-V343B 0.482478721665106 A325B-V330B 0.478124975448122 W8A-A13A 0.477280656446753 I329B-N334B 0.476936142776326 V268B-S273B 0.47239419145128 Y48A-G96A 0.472101770967019 F200B-D208B 0.468977360810912 S277B-G340B 0.468477299310156 F49A-L93A 0.465301451054838 V17A-L53A 0.461530695591426 F49A-A92A 0.460619696745997 C14A-L53A 0.45987902040841 V199B-L235B 0.455777043401994 A92A-V113A 0.449813649329146 S273B-A339B 0.437964232081228 F56A-I61A 0.437844870228565 S91A-A116A 0.429733913895068 Y230B-G278B 0.42450766792527 I269B-M347B 0.419029991262316 C196B-L235B 0.416613897297071 A13A-L53A 0.41480286574973 G294B-I338B 0.412893632293818 F238B-I243B 0.411918151622998 M192B-H233B 0.4113894835133 M10A-H51A 0.410703593522107 T88A-V113A 0.409412955598766 S273B-A298B 0.405426210609781 F231B-L275B 0.401257724544861 V6A-L84A 0.400927201486791 V303B-A348B 0.399717526503398 H237B-S293B 0.390408618532097 Y297B-V343B 0.389858070541292 M11A-H55A 0.388844012088026 V296B-W328B 0.387322150589615 W46A-M54A 0.385710739477987 F200B-I205B 0.379567166457824 S239B-L244B 0.377632757317186 S273B-V343B 0.375637987036391 M241B-W328B 0.375095508611157 V15A-L53A 0.372042511636201 H55A-S111A 0.371653649723223 L53A-G108A 0.37158901475689 L93A-V268B 0.369080521279188 V197B-L235B 0.368459762636478 M54A-G108A 0.365404612339889 A298B-A325B 0.365069095643224 I322B-I327B 0.364969864831809 V86A-L275B 0.364878576321612 S57A-L62A 0.363630052346825 V296B-L341B 0.360226857843258 M193B-H237B 0.35961065936131 Y230B-G294B 0.359303076385276 I269B-G344B 0.357029797040368 R229B-L275B 0.355650750655839 Y48A-G112A 0.35527833706745 V295B-L341B 0.352216525440507 Y302B-M347B 0.35032319919947 A92A-G112A 0.349921741390806 V17A-H55A 0.348067849164289 M300B-L305B 0.344127693555786 L276B-A336B 0.342157556633199 G294B-A336B 0.33993572458612 W228B-M236B 0.339347707289135 T270B-L275B 0.339333953497324 C196B-F289B 0.338783003624258 H237B-G291B 0.334823924647455 A13A-G109A 0.322319134072699 A52A-A92A 0.321140375570684 L276B-G340B 0.320981818163914 A195B-G291B 0.320795636684907 M11A-H60A 0.317409402355151 M300B-G344B 0.317177880225962 I327B-G332B 0.316826009526076 S273B-A346B 0.316374201315866 L305B-F349B 0.31485552741343 M300B-V350B 0.312490511354374 S293B-A325B 0.311474275458664 M193B-H242B 0.309716289514672 L341B-A346B 0.309195628205801 I269B-V343B 0.307978044200997 L305B-L345B 0.307105294152033 Y48A-L93A 0.307002912758228 Y302B-L341B 0.306742746344183 Y230B-V268B 0.305521142784345 Y230B-A274B 0.303422996658291 L299B-L341B 0.299304928498737 L53A-L110A 0.295137093411742 V86A-S91A 0.294952083956181 W304B-A348B 0.294582852403027 Y230B-V295B 0.29126801244678 L235B-L292B 0.28946426085394 M300B-A325B 0.285015934593036 G291B-G340B 0.283575166941385 H51A-S91A 0.279751772160163 A298B-A342B 0.279164321083528 L244B-G291B 0.278685698042568 N64A-G108A 0.277640648703689 G301B-L326B 0.270688548481122 M59A-N64A 0.269717260525939 M241B-N246B 0.269592299827882 V295B-V343B 0.268383835046964 L235B-G290B 0.26807689376735 I87A-A92A 0.264689660458805 A274B-G294B 0.26379198194469 H51A-L89A 0.261399778303696 C14A-I19A 0.25879436764868 S91A-L110A 0.257640214970076 I272B-V343B 0.256529648622333 V199B-Q204B 0.256247148618629 S91A-G112A 0.254745160669643 W249B-V295B 0.254471303561053 V295B-H337B 0.253162575100957 Y48A-V86A 0.253042143538485 S293B-A336B 0.252626064112276 Y302B-A346B 0.25159990679937 C196B-I201B 0.250732196285489 Y97A-V113A 0.249762571864583 G278B-A336B 0.24932940860714 S293B-A331B 0.247843697144744 Y48A-A92A 0.247447695395088 R229B-M236B 0.246698707280004 L271B-G344B 0.246449265734927 V197B-D208B 0.245822305743007 S273B-L292B 0.243303656881868 F231B-G294B 0.243283887341566 Y97A-V343B 0.240678417357592 W67A-V113A 0.238307082985285 V98A-V350B 0.236288791091648 S239B-N246B 0.236231913704496 H233B-L276B 0.235531489052767 L94A-T270B 0.232185472082872 A274B-F289B 0.23214269233737 I90A-V343B 0.232109434714655 I90A-V114A 0.230484148028745 S57A-N64A 0.227771577776313 T270B-L341B 0.227610441640866 G278B-L292B 0.22713538558913 F200B-A234B 0.226796328787684 N246B-G290B 0.22654808598192 S95A-S273B 0.226481724600691 L93A-I272B 0.225991465183639 F49A-G112A 0.225344372155317 S273B-G335B 0.225081280246371 A202B-F238B 0.224783297333266 V199B-H237B 0.221844725406545 Q204B-H237B 0.220932771773893 A20A-F56A 0.218680902462031 V17A-G109A 0.218176951482869 A234B-S239B 0.216808849063369 Y48A-V113A 0.215593649263589 C14A-G112A 0.215374167943017 A202B-S239B 0.213916348118677 H55A-G109A 0.213832057943445 L305B-A348B 0.212815601740552 A331B-H337B 0.212721235629475 R47A-M54A 0.21271143770106 T270B-G301B 0.212052638280865 G290B-H337B 0.211483968947735 W68A-T88A 0.210959721191284 G301B-I329B 0.210949838126818 Y97A-F349B 0.210761098192091 M193B-I243B 0.207648313332454 M300B-R319B 0.20762229468742 G278B-N334B 0.206806540382883 T270B-I338B 0.206373915881856 H233B-H242B 0.206145317375471 H233B-L271B 0.205294490938212 F200B-H237B 0.204856106369145 S91A-S277B 0.204497385865631 T270B-V295B 0.204138664284384 A52A-G108A 0.204021836991463 I90A-L275B 0.202877250356945 L235B-M241B 0.202859290701049 I272B-G340B 0.202793241396696 M11A-L58A 0.202512696678522 L292B-N334B 0.201829351445324 F45A-V268B 0.201676127238964 W250B-T270B 0.201441408423481 G290B-V295B 0.201252738510348 M11A-I61A 0.201016804223599 V86A-R229B 0.200467987335751 F18A-G109A 0.20029779956946 V191B-C196B 0.200182004857085 L53A-M59A 0.199344316774181 L93A-G109A 0.198270218435677 C196B-G294B 0.197960197493137 Y297B-A339B 0.197476125732246 L65A-M118A 0.196692999696258 V86A-Y115A 0.196431954270878 M300B-V330B 0.196307360147476 H233B-S273B 0.196164408372803 I90A-G112A 0.195642690282908 W46A-T88A 0.195331131254788 W249B-I322B 0.195126062973323 A234B-A274B 0.193978081382809 C196B-L240B 0.193216894916016 L235B-G294B 0.191329198083144 W250B-G294B 0.189851752661528 T7A-A52A 0.189583900507727 V15A-M59A 0.189231663894723 W68A-G112A 0.188740773468911 T232B-G291B 0.188581195642348 A13A-H51A 0.188517547702463 C196B-G290B 0.187998946547912 M193B-L240B 0.186752703060143 S273B-Y302B 0.185952154386284 V199B-M236B 0.185442465245669 V17A-H60A 0.184681597387011 L276B-A339B 0.184263856593999 G290B-G332B 0.18376350079809 G108A-V113A 0.183178771329681 S293B-A342B 0.182776375567483 L276B-V343B 0.182720604813864 Y97A-G344B 0.182346180519646 H60A-V114A 0.182163854069807 H242B-V296B 0.182001764479532 C196B-W249B 0.181959110534718 M300B-G320B 0.181750948427883 L247B-M300B 0.180922556241234 G96A-V113A 0.180895247871899 C14A-L58A 0.179955205326237 A13A-H55A 0.179337429907776 L84A-G112A 0.17931822284015 A298B-A336B 0.178999528349053 L299B-G344B 0.177918339315748 Y97A-S111A 0.177706080868685 V199B-H242B 0.176639230810426 T50A-G112A 0.176379749021907 I269B-A348B 0.175616385617398 A234B-H242B 0.175530090527472 F18A-M54A 0.174846225192655 S277B-V296B 0.174519128449851 C196B-Q204B 0.174107992314192 S273B-G294B 0.174005009150294 F200B-M236B 0.173479906114263 G278B-Y297B 0.173413459363006 V199B-G291B 0.173131872445144 H233B-H337B 0.172981663740227 M192B-V296B 0.172250332347009 G96A-Y115A 0.172192178266643 V303B-R319B 0.171826639267407 I272B-G278B 0.171635447759902 S91A-V268B 0.171368450521551 V268B-G340B 0.170568554318112 L321B-L326B 0.170459262891296 G294B-W328B 0.170284896121423 F63A-V113A 0.170074240859069 V198B-H233B 0.169087020897081 L53A-G96A 0.168150196982495 R229B-S277B 0.167786567365573 G290B-A339B 0.167665963593581 F200B-L235B 0.167583979898492 L275B-G344B 0.166221710060835 L206B-M236B 0.166131877658208 A274B-G301B 0.166101437961215 L275B-H337B 0.164813051019175 I267B-A298B 0.1647750836947 W250B-L321B 0.164441096208293 V9A-C14A 0.164377738038786 L89A-S277B 0.163915218518901 A331B-G340B 0.163446843462303 W249B-W304B 0.163163467312928 V268B-A342B 0.162112457963197 S293B-H337B 0.160807113039294 W67A-G112A 0.160729155075823 Y297B-A342B 0.160425789349251 A20A-S57A 0.160237682909852 W67A-L84A 0.15994551913344 V197B-H233B 0.159869943056727 R47A-S95A 0.159462048634064 Y97A-G109A 0.159338290562211 V268B-Y297B 0.158586307029281 W250B-W328B 0.158244507243997 I272B-G294B 0.157461411037144 D208B-G290B 0.157357753170749 W250B-Y297B 0.15721587674304 Y297B-W304B 0.157203333441378 V15A-H51A 0.157003497643176 V17A-M54A 0.156996457825467 Y302B-H337B 0.156845290410829 I201B-L206B 0.156491310037804 M54A-S91A 0.155498063510751 F200B-F289B 0.154336012508904 L93A-V98A 0.154029873165138 I267B-I272B 0.153720931801415 G294B-Y302B 0.153601822667433 V16A-H51A 0.152978777607355 F18A-A52A 0.152588464451364 L266B-G301B 0.152036769619751 H51A-V98A 0.151734452496303 M10A-I19A 0.151611692374367 I269B-I338B 0.151466696226621 N64A-L110A 0.150846634118628 G294B-L345B 0.150838772128307 A195B-F200B 0.150797441052431 G294B-L341B 0.150796751170197 I90A-A346B 0.150193576824078 V295B-M347B 0.150161478115407 W328B-I338B 0.150123860579213 I90A-A342B 0.150100423005795 H60A-G112A 0.150029578215807 L248B-G294B 0.150015115478592 I12A-M21A 0.149553116772104 V191B-I267B 0.14912089652295 F238B-S293B 0.149096212067909 M21A-G108A 0.148512547492315 W8A-L53A 0.148476472528626 L235B-W250B 0.14789898080799 T270B-H337B 0.146735611267194 L266B-G294B 0.146474132448374 I269B-G294B 0.146114495646953 G294B-A339B 0.145604981863833 T270B-A346B 0.145481529500395 F245B-A331B 0.145422630869581 W8A-W68A 0.145243965986482 I12A-I61A 0.144747272132855 H51A-H60A 0.144343578258091 L58A-G108A 0.143695462301378 T232B-G294B 0.143383560064873 L235B-G278B 0.143364929950367 Y230B-L292B 0.1428203122356 V197B-M241B 0.142530112697708 Y297B-L321B 0.142488776681832 M59A-G109A 0.142411396190729 V197B-F238B 0.142288928993202 G301B-L345B 0.142200087855378 A195B-H237B 0.142154943269339 I85A-L271B 0.141743219609844 F18A-H55A 0.14159142787023 V191B-V295B 0.141182257726419 I272B-Y302B 0.140915798810002 T7A-L65A 0.140843939522482 L276B-G290B 0.14069341919694 I267B-L276B 0.140510948465799 C14A-S111A 0.140452465625133 M236B-H242B 0.140346951022331 M54A-G109A 0.140120186303575 G301B-A342B 0.140011993444903 S277B-H337B 0.139856795950684 L247B-W328B 0.139752720179419 H233B-T270B 0.139612364049928 M236B-G294B 0.139032135429213 A195B-H233B 0.138167508229502 Y48A-I87A 0.138152513012591 I194B-T232B 0.137667902429339 A20A-T50A 0.137496582583466 G291B-G332B 0.137474659600007 H51A-T88A 0.137212065981605 C196B-S293B 0.13708688017282 A92A-T270B 0.136539886623612 I87A-I272B 0.136537287176542 V198B-S239B 0.13573085376776 W249B-L266B 0.135628051686798 L276B-L345B 0.135546850483757 V199B-G290B 0.135485268868891 V16A-S57A 0.135349482298509 V6A-V114A 0.134893204998907 M192B-G291B 0.134721944946767 S91A-V343B 0.134689162618818 I267B-Y297B 0.134516773547669 V191B-V268B 0.133484557862962 V98A-S111A 0.13346142886525 V9A-V113A 0.133307965023951 H242B-V295B 0.133306226124659 A234B-A298B 0.132837623819452 I194B-I243B 0.132752440859959 I61A-L110A 0.132278198179574 I243B-L292B 0.132121993368491 Y230B-I267B 0.131848224682898 I272B-V296B 0.131492556192304 L244B-W250B 0.131377581204139 Y302B-A339B 0.131334066773502 Y302B-L345B 0.13129467629574 A298B-N334B 0.131238039114249 L66A-G112A 0.131199320413906 Y97A-A348B 0.131060808519848 S91A-Y115A 0.130761978958837 M59A-W67A 0.130723409430088 A52A-A116A 0.130585696697376 A325B-N334B 0.130239057073251 G301B-H337B 0.129900267361784 I12A-V17A 0.129859403542761 W68A-Y115A 0.129661305122919 C14A-W67A 0.12951375195785 L66A-V113A 0.129474708034675 L305B-V343B 0.129272590436107 H60A-V113A 0.129268342017757 N64A-A116A 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