[Wed Aug 24 17:22:20 2016] >Input file: TM2RDDATD.pdb >TM segments: A13-28_A337-354_A366-386_A394-409_A442-458_A467-485_A543-559_A873-889_A901-921_A925-941_A978-992_A1000-1018 MAIDEN score = -72.5787 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V990A-N1001A 10 A457A-R468A 10 V448A-C887A 1.71184358902525 F453A-S471A 1.32974884872791 V990A-T1005A 1.25855168021549 M552A-I910A 1.11876570368916 L989A-Q1000A 1.02985625487984 I19A-V374A 1.00183484148643 M20A-L377A 0.995757369245132 D408A-V482A 0.994919183538732 I983A-M1011A 0.98607136037101 I983A-M1008A 0.976988737848703 G444A-C887A 0.853180958259252 F352A-T369A 0.828527923435181 L344A-I402A 0.811590673944691 V372A-V406A 0.809024138569795 L907A-T1013A 0.805486253703361 P368A-P373A 0.80438158971356 V340A-F396A 0.797096416590731 V454A-I472A 0.78356153452871 D408A-L442A 0.769530270661827 F458A-Y467A 0.747369438741098 M20A-V374A 0.731287781182456 I910A-T1013A 0.719284449760934 K342A-A347A 0.71902679986361 F453A-V475A 0.706685688167004 V454A-S471A 0.697045913526045 V448A-V884A 0.684499521640955 M398A-A477A 0.683618305386523 V454A-R468A 0.683565424896384 V905A-I935A 0.672675092019251 L907A-L1017A 0.669204001309077 F453A-I472A 0.666931086522807 V375A-L480A 0.666401698338045 P455A-L876A 0.664788112663619 L555A-L913A 0.661324651653753 A401A-M478A 0.65603180865524 M902A-A939A 0.653100307944074 V341A-E346A 0.651883131732713 F453A-I474A 0.648838062260152 A22A-L377A 0.645574837673755 V340A-V399A 0.644294004139505 I19A-L377A 0.639371505649096 V354A-L980A 0.635403772779561 L442A-V482A 0.634990237493874 G403A-F982A 0.633826637087503 F927A-V1003A 0.627816530677655 A912A-M1008A 0.627435774143933 T933A-V1007A 0.6234506266897 T379A-T473A 0.616768484865441 I337A-M395A 0.610205448199094 L937A-M1011A 0.60255875718029 I935A-K940A 0.60213393627556 M456A-L876A 0.596985519248043 G908A-I935A 0.594672024715893 A26A-F380A 0.594288054792734 F396A-A401A 0.593532392896689 E339A-V399A 0.592399959974845 V452A-G936A 0.590468581831536 F885A-M902A 0.588309761183488 V909A-L931A 0.574195848351091 V452A-Y877A 0.56841001336493 L383A-S476A 0.563760916817258 V909A-I935A 0.556574386314381 M552A-L913A 0.556175638303428 L350A-A981A 0.555220732806953 G908A-V1012A 0.546082371310753 V452A-L932A 0.543663307700704 L914A-R919A 0.541443852243674 F352A-L366A 0.541363820500601 A916A-L921A 0.540966548219228 D407A-A981A 0.540773295588092 A457A-I472A 0.540542457789779 F556A-L913A 0.537255975348232 A446A-M478A 0.53189691186783 V884A-A889A 0.529214602910562 F453A-L932A 0.528219402497444 A16A-V484A 0.51973280569191 L405A-A477A 0.515811846279998 A457A-F470A 0.515295260916434 S880A-F885A 0.514203272069533 L931A-V1007A 0.5124997288809 V990A-A1002A 0.511805800396809 V372A-A409A 0.507523179751813 A912A-T1013A 0.504256822218637 L907A-S938A 0.49609499646385 I27A-F380A 0.489017648749206 L344A-V399A 0.483023205904332 I445A-L888A 0.479786829238887 V448A-L888A 0.474821045792914 S979A-V1012A 0.471641294453402 Y467A-V929A 0.471525785024129 T934A-A1014A 0.471192048496053 M456A-S471A 0.470319097559238 A446A-V482A 0.468986401612051 S979A-L984A 0.466216619991378 L921A-A1002A 0.463269232175499 V372A-L405A 0.462018415811841 S938A-A1018A 0.45631980603357 L376A-I402A 0.456260603271412 V909A-T934A 0.455403454069431 E346A-V351A 0.452195194765393 P988A-G1004A 0.44854503460629 M987A-T1005A 0.444888296715441 E339A-L344A 0.439646969670868 A401A-V406A 0.437663451378819 F556A-I910A 0.436790368111107 V909A-A1014A 0.436005572558354 L350A-L984A 0.434676642840022 T379A-A477A 0.430219889280407 L383A-T473A 0.427403431527128 G908A-T1015A 0.425087715169175 V406A-F982A 0.42481575031862 Y467A-V925A 0.424470546154991 I983A-V1012A 0.42016029620817 I935A-M1011A 0.416962930290835 V549A-L907A 0.415343312391195 A912A-T1005A 0.414736949732671 V351A-V406A 0.414703897544326 G551A-I910A 0.414449544008713 H338A-M398A 0.406432517843718 P455A-I879A 0.404640873306685 I910A-G1010A 0.403738499020293 L449A-V475A 0.403362536463221 A371A-V406A 0.3976330270994 L404A-F982A 0.397007575197646 V340A-M395A 0.396953682631272 A16A-V374A 0.390294023440587 I548A-I910A 0.389483011169996 G397A-I402A 0.388770980217227 S979A-M1011A 0.388269811448029 P988A-Q1000A 0.388219074800398 E346A-P373A 0.379212008878535 V341A-V399A 0.37708998575466 A446A-A485A 0.375898920364232 V1012A-L1017A 0.373728330748778 L555A-I910A 0.372629560512982 L914A-G1009A 0.372439445145164 M902A-I935A 0.370834831773566 L913A-G1009A 0.369789833998989 L555A-T917A 0.368605783981888 L400A-V1003A 0.367796081840363 A912A-L931A 0.364930021602239 L376A-A477A 0.36358969908175 A347A-L984A 0.358342415860872 Y877A-G936A 0.357110101451522 Y926A-V986A 0.356517780306494 L350A-G985A 0.35512577210975 M398A-I474A 0.354953204629251 L400A-V986A 0.354639743984122 V452A-V883A 0.353557594568752 V406A-A981A 0.353181524697366 L555A-L914A 0.351616484580718 A451A-K940A 0.350279882552375 L937A-A1014A 0.350080769994394 F458A-R468A 0.348624122041783 Y926A-Q1000A 0.346836000463928 M987A-M1008A 0.346277073562947 L404A-M478A 0.34365181295509 V345A-L350A 0.340920583866163 M447A-V484A 0.335144729664364 A347A-A401A 0.333979664523469 S979A-T1015A 0.333714046965973 T343A-G985A 0.332579906200628 A16A-G23A 0.330573059449714 V990A-V1003A 0.330209772071572 M552A-V1012A 0.329788513661763 H338A-T343A 0.328737272476353 V375A-D408A 0.327054209519601 M552A-P906A 0.326872463435544 D408A-V443A 0.325742765562761 V986A-T1005A 0.323671295525439 G908A-A1018A 0.322972797132895 F453A-F470A 0.322144945524137 M987A-G1004A 0.32078975245291 C887A-I935A 0.31698989212524 P988A-N1001A 0.316831989795249 G23A-A385A 0.316610172173061 L405A-S481A 0.316095501524327 G985A-G1006A 0.314949369268519 V443A-V482A 0.313993169794369 L449A-V454A 0.312091834240191 L376A-M398A 0.310462180612088 E346A-L984A 0.309879270430378 A873A-S880A 0.309297397142652 V454A-C887A 0.307745794461902 V901A-S938A 0.30744985940944 M20A-V375A 0.304716972397672 E346A-T369A 0.303999439096618 I19A-V375A 0.30344836951422 T379A-L480A 0.303373529225775 A26A-A384A 0.301682998031898 G908A-M1011A 0.301084843156104 L405A-M478A 0.300838601708259 L480A-A485A 0.300099170871463 G403A-S481A 0.29996504425107 I402A-A477A 0.299475475013644 V375A-A477A 0.298658827664537 L989A-T1005A 0.297938765420587 L989A-V1003A 0.297581599340432 M398A-Q469A 0.295627674894495 Y467A-V1003A 0.295557973461186 P455A-T473A 0.293837156280599 D407A-F982A 0.293362990928199 I17A-V374A 0.292322879817427 I348A-V372A 0.292319901544769 V372A-I402A 0.292286982541345 I983A-V1007A 0.291431681595292 A915A-G1006A 0.290158078170201 L559A-A916A 0.289974957064194 A912A-M1011A 0.289301239991331 V375A-L405A 0.289282585225536 G403A-G930A 0.28835126914348 L25A-A381A 0.288029382158598 L383A-G397A 0.287338938401411 A26A-L377A 0.286439649852421 L405A-G985A 0.285626235016613 V904A-V909A 0.281447443383677 V986A-G1004A 0.28096377314165 V399A-D407A 0.280188844142273 L344A-G397A 0.280097277433894 V374A-V484A 0.279725588915011 V990A-V1007A 0.278152056692787 A873A-Q928A 0.277860188380623 P906A-T933A 0.277729062626624 A916A-G1006A 0.277220286423076 A347A-A981A 0.276493896917702 V354A-M987A 0.27485480383438 Y877A-P906A 0.27481342032888 M395A-Q1000A 0.273867557725824 M398A-Q1000A 0.271314469118894 M20A-G378A 0.27128836270456 V549A-V909A 0.269898990716352 S880A-G936A 0.268320884399097 S450A-P455A 0.267976262074305 V382A-S476A 0.267843904676407 M395A-T473A 0.267247122425851 A446A-A479A 0.267227681348636 V448A-Y877A 0.266129963892388 K342A-S992A 0.266120175670624 G23A-F380A 0.265602118845928 M398A-R468A 0.263678789596059 L559A-L921A 0.26316661878663 D407A-M1008A 0.261701059435851 L449A-V884A 0.261378465062224 A915A-G930A 0.260567131165548 A912A-S938A 0.259997338309815 T934A-T978A 0.259430824013553 G551A-G908A 0.259322435658859 F927A-G1009A 0.258967924061196 V452A-V475A 0.258778579050518 G444A-L888A 0.257341073885026 M398A-V1007A 0.256854234892005 A347A-F982A 0.256388859105947 G911A-V1012A 0.256009317605771 L903A-S938A 0.255449124265969 P455A-S880A 0.255442894720452 V909A-T1013A 0.25523352517058 M398A-T473A 0.254672697967488 L989A-N1001A 0.254408686264929 K342A-P988A 0.254260342005503 F470A-G930A 0.253895407859725 F453A-R468A 0.253355038604145 S471A-Y926A 0.253226223419702 A553A-G911A 0.252148019082993 L931A-S938A 0.251857982923059 G911A-M1011A 0.251273825546624 S992A-Q1000A 0.250835912236171 A371A-G378A 0.250400955924171 L932A-S938A 0.250240927162264 Y877A-V909A 0.249929333916498 Q928A-G1010A 0.249550338766887 A409A-K940A 0.248223831832957 D407A-V986A 0.247752163769458 L350A-P988A 0.247214910868273 V1007A-V1012A 0.244341527000385 A451A-C887A 0.244284999738435 T933A-T978A 0.243457971990714 A451A-A878A 0.242761644711638 V549A-I910A 0.242348231202086 L350A-T978A 0.241830947491606 T369A-L376A 0.241820530750996 L405A-T933A 0.241811764224227 L376A-S476A 0.241334966536362 T933A-T1015A 0.241026619289686 G911A-A1014A 0.238970251629086 V986A-V1007A 0.238371635648549 A26A-L383A 0.23832615226273 V443A-V448A 0.235271783365542 A381A-A479A 0.235262811011259 V399A-V986A 0.234359377912732 A553A-I910A 0.233268814813933 I445A-A939A 0.233194939521608 Q928A-G1004A 0.232071276458635 L931A-T1013A 0.229520726502974 T379A-M398A 0.228872997675016 G444A-N941A 0.227905175574988 E339A-L989A 0.227827704061111 T369A-L405A 0.227480051489507 E339A-V345A 0.227088171058587 V374A-D408A 0.227056231181009 T473A-L480A 0.226877463784252 I19A-A381A 0.226784008568926 A409A-A981A 0.226397166292765 A915A-M1008A 0.22556824145031 F453A-C887A 0.224793012286776 I445A-V452A 0.22410622289321 Q469A-Q928A 0.223955170268995 I18A-V484A 0.223833479462024 N1001A-G1009A 0.222680038095126 L984A-T1005A 0.222536979115868 I935A-G1006A 0.221705043162195 V448A-V883A 0.221168693595381 L881A-L886A 0.220621124156008 I548A-L907A 0.220067183735147 V375A-I474A 0.220024224084602 L921A-N1001A 0.219878071795672 R919A-M1008A 0.219313001734845 F396A-A477A 0.21913454286933 G908A-S938A 0.219011840934742 G378A-L483A 0.218720627513864 A451A-V883A 0.216966843200538 M456A-I879A 0.216814067510997 S880A-S938A 0.216734995708975 A401A-S450A 0.215618180736797 T343A-V399A 0.215612537034092 I337A-K342A 0.215594451907521 M552A-V904A 0.214399272924758 P455A-T933A 0.214073959573479 V354A-G985A 0.213682378781928 V351A-M987A 0.213328507963324 V452A-G930A 0.213322371391869 P455A-Q928A 0.213134541902988 S979A-G1009A 0.212309935501468 V374A-I402A 0.21128919708821 G908A-T1005A 0.211261248782096 V399A-L404A 0.21113141069769 G911A-G1004A 0.210707285976865 S979A-P988A 0.210528505400423 V905A-L931A 0.210301992032115 V549A-G911A 0.209952402506814 R468A-T473A 0.209605656343406 L937A-T1013A 0.209286183853121 G911A-T933A 0.208913866360768 G444A-V883A 0.20881691287629 I402A-M478A 0.208401861554371 V904A-L1017A 0.208299466001031 A916A-A1002A 0.208279943607447 V354A-I983A 0.208032609919336 L913A-T934A 0.207113753384733 M395A-R468A 0.20694966567153 L400A-V1007A 0.205602251272901 A451A-F458A 0.205438281961758 V929A-V1003A 0.20529038648846 T394A-Q1000A 0.205272304607819 V452A-V884A 0.205202934940286 E339A-G985A 0.204638246393263 V375A-V406A 0.203994396179825 L449A-N941A 0.203314585110629 M20A-L483A 0.20304102706779 M395A-V475A 0.202947382202906 M1008A-L1017A 0.20236537511231 F352A-P368A 0.202308640382785 P368A-V406A 0.201752429416822 V399A-F470A 0.20170579588514 L931A-V1003A 0.201638857281507 G936A-T1015A 0.201605660913575 I17A-T379A 0.201604344654966 F352A-V372A 0.201590288452184 A401A-D408A 0.201481770906599 F453A-Y467A 0.201149564920248 V452A-F458A 0.200773721588239 T978A-I983A 0.200634145093981 M20A-L28A 0.199054166886142 M456A-I472A 0.198946917994945 A457A-S875A 0.198794289572874 G985A-Q1000A 0.198751079612374 V375A-L483A 0.198247964838101 G930A-V986A 0.19822586958199 I445A-T934A 0.197845477746769 V341A-I349A 0.1959308541159 V399A-L405A 0.195326767253596 V929A-M1008A 0.19516847086216 A457A-Q469A 0.194042977413506 I991A-T1005A 0.193623273372425 L344A-P988A 0.193418570847886 S450A-S938A 0.193351709381759 S481A-K940A 0.193012972854304 M478A-L932A 0.192696788776136 T343A-T369A 0.192648963239917 L913A-G1010A 0.192101520661826 P455A-L932A 0.191770401029334 A939A-T1013A 0.191528358555998 G920A-N1001A 0.191503120221362 F396A-V986A 0.191189362773617 S471A-G930A 0.190641117233903 M398A-V929A 0.190615043669988 G908A-L931A 0.189556739785229 T343A-I991A 0.189032594046684 A451A-A939A 0.188684290450873 D407A-V482A 0.188626717164588 T917A-T1013A 0.188322249220223 P874A-L881A 0.188232419326204 F982A-M1011A 0.188219661617274 M552A-L1017A 0.187740311499355 L903A-N941A 0.187578286215792 I983A-G1004A 0.187374101994347 T343A-I348A 0.187268991755905 I548A-P906A 0.186859046170095 S992A-V1003A 0.186597131753202 T369A-A981A 0.186308626924901 I18A-G23A 0.186178955716332 F918A-N1001A 0.186101418134249 S450A-K940A 0.185986820235503 T978A-T1013A 0.185066800544397 V986A-M1008A 0.185022052970285 V340A-G985A 0.184615365701733 V448A-M456A 0.184523695147254 I402A-A409A 0.18450747743792 V990A-M1011A 0.184504105542244 A916A-T1013A 0.184501738591281 L931A-G1010A 0.18403633246772 V443A-L483A 0.183490354377201 N941A-F982A 0.183348413746837 M456A-V884A 0.183342844066885 L559A-T917A 0.18239447701102 V549A-M902A 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