[Thu Aug 25 00:05:48 2016] >Input file: TM2VDFCGG.pdb >TM segments: A45-58_A73-86 MAIDEN score = 46.5362 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- BBeads pair Empirical energy ----------- ---------------- G51A-R83A 10 S53A-E81A 10 K55A-V79A 10 G49A-D85A 9.85962063812798 I57A-P76A 1.26955980029796 I57A-L75A 1.2229113447275 K54A-V79A 1.06547793573253 E47A-L86A 0.957531386681001 F50A-I84A 0.68936058690649 E47A-D85A 0.676332450475344 I57A-K74A 0.502297442226454 R52A-I84A 0.475378540508601 I58A-L75A 0.467668822291152 N56A-K74A 0.433127469426148 K55A-N82A 0.426697734536102 R52A-P80A 0.411999013093483 I58A-P76A 0.362206877254652 K54A-P76A 0.355568269069594 K55A-P76A 0.317766810248092 G51A-E81A 0.282797325589372 G49A-R83A 0.260811297820734 K54A-P80A 0.252979496123723 F50A-R83A 0.243009615230435 N56A-L75A 0.242659608303226 G49A-L86A 0.217627058886704 K55A-G78A 0.204706516525073 A48A-I84A 0.197679369169359 N56A-P80A 0.192623140215396 I57A-T77A 0.189702015861537 G51A-G78A 0.18376350079809 N56A-G78A 0.162026407257032 G51A-I84A 0.152784585447479 I58A-K74A 0.143106485096935 N56A-E81A 0.142012654786282 S53A-V79A 0.140136671986314 L46A-I84A 0.135740698773664 S53A-T77A 0.130980184364696 G49A-I84A 0.12833938258025 N56A-N82A 0.125425071766347 N56A-V79A 0.111420381182636 G49A-E81A 0.111014699256065 F50A-N82A 0.105024277752602 I57A-V73A 0.094923986945556 I57A-P80A 0.0741483228177351 K55A-K74A 0.0667193037744216 L46A-L86A 0.0640812766115957 F50A-P80A 0.0624697585733057 K54A-E81A 0.0524745927010861 G51A-P80A 0.0504552671918816 R52A-R83A 0.0401055325351942 A48A-L86A 0.0356973952247897 R52A-T77A 0.0282600335481271 G49A-N82A 0.019889519584551 G51A-V79A 0.0180149752003871 A48A-D85A 0.0174268708460419 I58A-P80A 0.0168577231083935 I58A-G78A 0.00571167984894183 K54A-L75A 0.00351070456246827 K54A-T77A -0.00175593912681249 K54A-R83A -0.00660840823047781 R52A-D85A -0.0101902083270788 G51A-L86A -0.0150715326296358 R52A-G78A -0.0157749919382075 A48A-N82A -0.0162916395304202 L75A-P80A -0.0262970973166521 N56A-V73A -0.026559021876011 K55A-T77A -0.0283302211127595 S53A-I84A -0.041550981850464 S53A-N82A -0.0491055478363203 G51A-D85A -0.0563809591522215 K55A-P80A -0.0625658580684909 I57A-E81A -0.066403283534596 R45A-D85A -0.070639351892017 S53A-R83A -0.071195938869332 K54A-N82A -0.0954333179650271 S53A-P76A -0.0963109884359419 K55A-R83A -0.100989593457868 E47A-R83A -0.110224429390209 F50A-L86A -0.124502443265571 N56A-T77A -0.139362740559511 P76A-E81A -0.148358039187901 K55A-E81A -0.148637773940671 K55A-L75A -0.149347396217625 I58A-V73A -0.156963602563811 F50A-D85A -0.157869105428017 R52A-V79A -0.161834479280681 K74A-V79A -0.17741687409993 E47A-I84A -0.196666797035997 I57A-G78A -0.20371396782337 I58A-V79A -0.219599327278166 S53A-G78A -0.238100536072309 A48A-R83A -0.240749063354629 I58A-T77A -0.249972409553479 L46A-D85A -0.278695818936523 R45A-L86A -0.28285183434754 K54A-G78A -0.302206337121218 R52A-N82A -0.324895687412473 S53A-P80A -0.358152774978699 R52A-E81A -0.368642594883198 I57A-V79A -0.435301073067981 F50A-E81A -0.448536244783802 N56A-P76A -0.469168929219032 G51A-N82A -0.715147387442644