[Thu Aug 25 00:41:07 2016] >Input file: TM2X27CGG.pdb >TM segments: X16-31_X37-45 MAIDEN score = 12.2897 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- BBeads pair Empirical energy ----------- ---------------- V19X-D45X 10 D22X-V42X 0.956077325887682 D27X-A40X 0.644699370441426 V19X-D43X 0.598250058643977 D20X-V42X 0.570689619125437 D23X-A40X 0.428137376361033 S24X-T41X 0.397405295539779 S25X-T38X 0.394979631784929 D23X-T41X 0.381612510067342 S24X-V42X 0.323977726865856 K29X-K39X 0.308424751827431 P21X-S44X 0.281959043557217 V19X-S44X 0.256541651592144 I28X-G37X 0.218791111812056 D22X-A40X 0.192941335761332 D27X-T41X 0.192564772737344 D23X-D45X 0.191509800786926 F16X-D45X 0.179353288632742 D20X-T41X 0.171807456333479 F16X-S44X 0.157381774844473 D22X-K39X 0.153797147611876 D27X-G37X 0.15312598842755 L30X-K39X 0.149381757601431 D23X-T38X 0.143762132155474 K29X-G37X 0.138033524052284 A17X-D45X 0.133570002493268 D20X-D45X 0.124909491328858 D20X-D43X 0.122138578210456 L30X-T38X 0.110145131645897 I28X-K39X 0.109790404466839 T18X-S44X 0.101182349365458 S24X-S44X 0.0965757824954361 L30X-G37X 0.0762712994955219 S26X-V42X 0.0754569338267865 I28X-T41X 0.0651471882170416 P21X-T41X 0.0634272273437015 D23X-S44X 0.0487969801692316 P21X-V42X 0.0438426272484209 K29X-T41X 0.0396081005763436 S25X-D43X 0.0395430662324106 S24X-G37X 0.0357237219720385 D31X-T38X 0.019576646309015 P21X-A40X 0.0156119144218483 S26X-D31X 0.0133900426335236 T18X-V42X 0.012535093702756 I28X-T38X 0.00432920915854496 S25X-L30X -0.000902652450001977 V19X-V42X -0.00246939555695924 S24X-D43X -0.0039360188845543 V19X-T41X -0.0088093678251947 S26X-A40X -0.0106131621228984 S25X-T41X -0.0146119384493657 P21X-D45X -0.0178606445984677 D27X-K39X -0.0206937928942181 D23X-G37X -0.0259373832163636 A17X-D43X -0.0291652817154611 D22X-S44X -0.0310627832918228 S25X-A40X -0.0389600091268854 S24X-K29X -0.0451688385873603 T18X-D23X -0.0525817539642084 S24X-A40X -0.0652189492853883 V19X-S24X -0.0741867382759107 S24X-K39X -0.0745616513533465 D23X-D43X -0.084347292478208 P21X-K39X -0.0947802823538186 S25X-G37X -0.0966201292024149 D22X-D45X -0.096960443496108 S26X-K39X -0.110467710054062 D22X-T41X -0.117792526473518 P21X-D43X -0.137199782840221 K29X-T38X -0.142581414171406 L30X-A40X -0.163155566276026 D22X-D43X -0.163228195148413 D20X-A40X -0.164879345510491 D23X-K39X -0.176970420905775 D20X-S44X -0.187635355613997 S25X-K39X -0.191010328300087 A17X-S44X -0.196328701242107 S24X-T38X -0.214034203705281 T18X-D43X -0.221724582899375 S26X-T38X -0.224470766006034 S26X-T41X -0.239626626274907 S26X-G37X -0.242422258298965 S25X-V42X -0.263032153140693 D27X-V42X -0.278614524639334 K29X-A40X -0.297869348672341 I28X-A40X -0.427270476803491 D27X-T38X -0.46025031821824 T18X-D45X -0.487271795040608 D23X-V42X -0.649804129782342