[Wed Aug 24 17:56:38 2016] >Input file: TM2YDVCGD.pdb >TM segments: A2-22_A41-66_A77-106_A112-135_A178-204_A221-242_A256-278 MAIDEN score = -81.1834 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- BBeads pair Empirical energy ----------- ---------------- C235A-L266A 10 I19A-I51A 1.48450653947918 E11A-I58A 1.11415005853967 C235A-S267A 1.01829654726709 F180A-H240A 0.987711964413058 V84A-F131A 0.968949654648835 A46A-P275A 0.938216917856751 V84A-S130A 0.933108674233849 D50A-V272A 0.919857803064311 M2A-T66A 0.913830412047385 Y101A-I106A 0.901942382897469 I14A-H268A 0.900474668720955 D50A-L85A 0.895801404826866 W236A-A263A 0.876184228717067 V53A-I58A 0.826742955021753 F181A-V186A 0.779384501462194 S92A-I123A 0.761900543518415 F60A-V82A 0.746078115871876 I14A-T269A 0.741220333839675 N22A-I51A 0.728293134616888 L94A-D99A 0.720782559226862 V53A-L85A 0.717204313011716 F180A-L185A 0.695156183094789 A47A-P275A 0.690851793700373 F199A-A222A 0.680565091924638 A57A-F81A 0.673845234574323 L52A-L85A 0.673466699515462 A57A-L85A 0.66794538295735 M191A-L225A 0.652495483951595 R100A-V194A 0.645668074024115 S224A-I277A 0.645051152538044 A47A-N274A 0.637276652463715 D50A-V55A 0.635226475855159 I14A-S271A 0.635084527863974 N179A-V184A 0.634860823145141 V82A-A87A 0.633375976435616 V6A-E11A 0.631664526855431 A61A-V82A 0.627836510209051 V43A-A48A 0.624294640345995 I51A-S271A 0.623957725977949 F42A-A95A 0.612773624763434 F60A-A79A 0.609140830376946 G21A-F276A 0.608182895777966 C80A-L135A 0.600265442022853 V184A-W236A 0.598668968513155 V44A-A49A 0.5912267487916 V82A-G134A 0.586342591530236 L83A-S130A 0.581061001886179 L17A-V272A 0.581027037818406 F42A-A119A 0.576070712868802 F178A-C183A 0.566532264125585 F42A-S92A 0.564635596181978 L85A-S130A 0.55595576695533 K120A-I125A 0.55535466273466 V84A-I133A 0.55405074735585 S88A-S130A 0.546617458677971 F60A-I78A 0.545139660389489 Y101A-V194A 0.531297239111016 F42A-L93A 0.530072076202269 L231A-N270A 0.528247919453402 S45A-S92A 0.517925670579659 I19A-G54A 0.51682947288306 Y195A-A226A 0.515641811579089 A15A-V55A 0.512867094033042 F232A-L237A 0.512323329503543 V273A-Y278A 0.506321212934479 G3A-S65A 0.502747955240286 A97A-V194A 0.502550846372768 L239A-M260A 0.500009943291403 C183A-C235A 0.499728209568456 L231A-W236A 0.498955933766112 S45A-I123A 0.498562992289055 A15A-V53A 0.498324714642041 L94A-P187A 0.495254836784733 Y7A-Y261A 0.492365542747137 L239A-I264A 0.479613602710413 L192A-R197A 0.479501581920285 L83A-I133A 0.47911249666449 L17A-S271A 0.477618919376944 A87A-W127A 0.472186322002275 L234A-L266A 0.46910580642157 Y41A-A119A 0.465732062292549 S88A-W127A 0.463423580304167 A49A-T86A 0.461112093678695 I133A-N179A 0.460506812290428 F42A-D99A 0.455256502205882 V53A-S271A 0.45360034396548 S130A-L135A 0.449031770739749 I228A-N274A 0.448497901851728 I198A-A221A 0.448431717795287 I198A-R204A 0.443855995723634 V43A-S92A 0.441491400865964 I125A-S130A 0.433095860748435 V114A-A119A 0.430056140235999 Y261A-L266A 0.422318538585286 L113A-R118A 0.421247317468867 L234A-S267A 0.419619714410556 F81A-G134A 0.417437505911961 W127A-A132A 0.415506783457571 F232A-N270A 0.414672199959159 V10A-V265A 0.408952447114751 L56A-V82A 0.405573793209109 K223A-I228A 0.405477317448217 V194A-L225A 0.405069724807322 I227A-F232A 0.399522856519231 A46A-N274A 0.398998947609994 I51A-L56A 0.393676606463803 E11A-C235A 0.393298265235795 W258A-A263A 0.393055042762201 A87A-L129A 0.391840961729137 L94A-M191A 0.391827351843052 A18A-V53A 0.390323060350492 A18A-I51A 0.385536866215128 A182A-P187A 0.385380137892974 I198A-A222A 0.384202710114098 I90A-C183A 0.383973859591428 V84A-W127A 0.383560808623668 S45A-S89A 0.382760457361915 A233A-A263A 0.378507659508564 I8A-I62A 0.378487631942347 F42A-I96A 0.377885667174291 V84A-L129A 0.375900443428544 N270A-P275A 0.374771731000428 N22A-P275A 0.374770985036716 N22A-A48A 0.37391546154608 A95A-A124A 0.372816492576056 L192A-V229A 0.369604076651173 A46A-F91A 0.365679321475479 V229A-L234A 0.364147230346995 A97A-A226A 0.364044267599496 A46A-L93A 0.36323897792123 A15A-A61A 0.362224355616487 S88A-L93A 0.361857081994766 V53A-H268A 0.361483975920692 C235A-T269A 0.359130567533262 A49A-L85A 0.359112498421984 S4A-S65A 0.3574693135476 W236A-V265A 0.357196424498241 Y7A-L12A 0.35680062838266 A97A-M191A 0.355142460651708 P187A-W236A 0.347027270542328 A201A-K223A 0.344185908646322 A46A-K120A 0.343856556956451 V43A-L93A 0.34100284597627 C235A-V265A 0.334739652259262 D50A-V84A 0.332674714784942 G21A-A49A 0.32214886339164 A46A-S88A 0.3214786171603 Y41A-A46A 0.321271036404788 C126A-C183A 0.320575199981725 A18A-A57A 0.320167334758752 A87A-S267A 0.319379139558597 S88A-A182A 0.319015439104405 I14A-G54A 0.31805624123024 S65A-A79A 0.315554553085101 A87A-C126A 0.31197547168802 G54A-P59A 0.306701401431562 C80A-V128A 0.306625252334006 V43A-C126A 0.305295132872944 L188A-V229A 0.304220470777371 A61A-S267A 0.303938925534775 A57A-A87A 0.303321616272359 I242A-M260A 0.3031905971771 M260A-H268A 0.302068736024138 A103A-G112A 0.300836796929863 V16A-G54A 0.300402359093595 I104A-I198A 0.29794934256658 W236A-L266A 0.296914652135619 L237A-A263A 0.296549381005161 A97A-L190A 0.296257934544859 L231A-V273A 0.295140434140091 P238A-T269A 0.2943727216404 I14A-V272A 0.294111428018772 S88A-P187A 0.293533649162872 T86A-P187A 0.293457790791878 G112A-A119A 0.291638002716051 R100A-Y278A 0.283669126240768 Y195A-L225A 0.283541121427758 C235A-A263A 0.280962940590298 D99A-I104A 0.277667667954258 C80A-F178A 0.277405849174654 L94A-G193A 0.274804791143636 T86A-C235A 0.272855192168372 I98A-A103A 0.27186368447117 P187A-L192A 0.271455709345847 C80A-N179A 0.270862878801888 A46A-I90A 0.270664703801796 V84A-V128A 0.270395523820597 G134A-C183A 0.269388847012974 S92A-G121A 0.267160445904604 C235A-H268A 0.267105059317602 S4A-A61A 0.266503023653147 V184A-L189A 0.266198407794136 Y195A-L200A 0.262904124967814 I228A-A233A 0.262772078916243 S130A-N179A 0.261884125033204 L231A-S267A 0.260649148916116 L189A-V194A 0.257952837423584 M2A-S65A 0.257510348554563 G21A-V272A 0.256476761825502 V53A-T86A 0.255927243229314 Y41A-K120A 0.255664457504964 C183A-V229A 0.255354274538989 I96A-M191A 0.254840380038504 S92A-C126A 0.252146463296695 Y195A-A221A 0.251261171550965 A103A-R197A 0.250877746756624 C235A-I264A 0.244301605107189 L196A-A201A 0.243766525449801 F81A-C126A 0.24335852413187 I96A-Y101A 0.240791236988399 S88A-C126A 0.240123280887349 Y101A-A222A 0.23689775231565 Y101A-A201A 0.236739309495392 S45A-N274A 0.235392394735551 Y195A-K223A 0.23452964830989 D99A-Y195A 0.234379683917919 F81A-A132A 0.23427755874411 L234A-N270A 0.234113108624783 L225A-P275A 0.23298424012834 G54A-N274A 0.231748904929517 A46A-Y278A 0.230531756774907 I90A-P187A 0.230082718462386 N22A-F276A 0.228810761425159 A13A-S271A 0.228798588800762 I90A-V229A 0.228029142001088 H240A-Y261A 0.227769112249242 P238A-L257A 0.22724062079351 L12A-T269A 0.225247426363895 A87A-F181A 0.225140506041724 V43A-I90A 0.224350406427459 R100A-I198A 0.223568352064033 I62A-V265A 0.222248453186958 L196A-A222A 0.222158008937405 E11A-V16A 0.222154648215039 A47A-F91A 0.21938972102669 S267A-N274A 0.218643289580394 L190A-Y195A 0.218385218413353 G3A-W258A 0.213893601459621 S89A-A97A 0.213425402498399 V82A-S267A 0.212571400059107 A15A-S267A 0.211304661472576 C235A-I242A 0.211082403732479 A226A-L231A 0.208799074751734 L52A-V82A 0.207841558641386 L56A-F81A 0.20713492935697 P59A-S271A 0.206765412259337 S88A-G134A 0.206444906695044 T9A-H268A 0.206334815755151 A63A-F77A 0.205570193626373 L17A-V273A 0.205018796159701 A61A-F77A 0.204523178372389 L189A-V229A 0.204252883545041 L266A-S271A 0.203577416066112 D99A-A221A 0.203362897976863 L234A-M260A 0.202767372408567 L17A-N22A 0.202512235996337 L56A-A61A 0.201616115363499 A15A-I58A 0.201379654508347 L231A-P275A 0.20121609823526 A97A-R197A 0.200259913260878 A57A-L83A 0.200005376418098 T86A-W236A 0.19977993432506 V55A-F81A 0.199521659984962 G21A-V43A 0.199326844573843 L94A-P275A 0.198532853790352 G21A-I51A 0.198254792447326 V43A-P275A 0.196480134536426 T86A-I125A 0.196168927813641 N270A-Y278A 0.195492548768003 Y7A-A263A 0.195485520833108 Y195A-A222A 0.194868365843082 F232A-V272A 0.193621120396694 L93A-N274A 0.192943722272719 V186A-L192A 0.192206127691363 T9A-G54A 0.192139578098772 H240A-L259A 0.192013871893597 L12A-I58A 0.192009994898871 L85A-C183A 0.191691868709132 A13A-S267A 0.190323408385226 M191A-V229A 0.189936971331115 A95A-R118A 0.189764299259831 H240A-S267A 0.189682788626668 V43A-D99A 0.189180427549359 T9A-A63A 0.188536347819231 G21A-N270A 0.187435698651493 A47A-T269A 0.187048096535918 A46A-T269A 0.186860848170965 P238A-W258A 0.186152517346819 A57A-S271A 0.185984899884311 A18A-T86A 0.185410642933878 D50A-V82A 0.185081835121933 Y41A-R100A 0.184629145778556 F91A-N179A 0.184620177615061 A48A-F91A 0.184544263483153 C183A-L190A 0.184103240930994 A222A-Y278A 0.182608656741491 T269A-F276A 0.182377208401456 F91A-C183A 0.181980371492081 L93A-C183A 0.181921758658918 Y101A-S224A 0.181547930161841 G54A-C80A 0.181098492856614 S45A-S130A 0.18090631233665 C235A-N270A 0.180445405944006 E11A-V265A 0.179904830006093 V44A-S88A 0.177655131684112 S92A-Y278A 0.17763306000002 N179A-L188A 0.177623873904519 L85A-N179A 0.176997116862685 Y7A-S267A 0.17643995424693 I133A-F178A 0.17622938785223 V16A-V55A 0.176156619336195 L12A-S267A 0.175522698840443 G230A-Y278A 0.175047172301633 A87A-S271A 0.174650837828029 S92A-S224A 0.17455602122203 R100A-A221A 0.174553653426099 S45A-A87A 0.174501674768424 I96A-A221A 0.174052926922407 S88A-H268A 0.173313712633321 S88A-A132A 0.173312583525972 L259A-V265A 0.173296195952629 I104A-A202A 0.173042361451207 N22A-V44A 0.172728527833264 R203A-A222A 0.171596464157243 A79A-S130A 0.171431571316607 A79A-I133A 0.171082086328408 L188A-V194A 0.170948179232424 L56A-C80A 0.170270647317618 D99A-K120A 0.170121622239638 A15A-D50A 0.169972731601807 F42A-F91A 0.169482488807311 V10A-M260A 0.168986574612797 L237A-I242A 0.16846568454026 V44A-V273A 0.168431667610449 P59A-T86A 0.168071718428331 V82A-V265A 0.167296878480376 L52A-A57A 0.167255254359168 A46A-V84A 0.167234620362164 A15A-I51A 0.167055367595765 R105A-I198A 0.166322439816735 L52A-N274A 0.166134817371358 A95A-I102A 0.165420340579698 P59A-H268A 0.165151308523843 Y41A-S89A 0.165098479730833 F181A-F232A 0.164702206794358 S89A-A124A 0.164646033270465 F180A-V186A 0.163863938498033 A48A-V273A 0.163220711445766 V44A-V272A 0.16283000270637 L185A-G230A 0.162480306539523 A221A-I228A 0.16219071403009 A61A-G134A 0.162052383357842 P187A-S224A 0.161694761256921 P187A-S267A 0.161694761256921 G230A-A263A 0.161636831452177 L83A-F131A 0.161635067486262 A18A-V44A 0.161407817149928 S89A-M191A 0.160732849421708 S5A-L262A 0.160402752505274 G21A-A47A 0.160291341341783 G54A-L83A 0.159279774256065 T9A-T269A 0.159098208006968 S89A-L188A 0.159020164335351 F77A-S130A 0.157967566588252 Y7A-H268A 0.157870950574199 L83A-W236A 0.155068462669618 V55A-A63A 0.154964043882884 R100A-R118A 0.154913946076562 E11A-A61A 0.154711561316685 G54A-N270A 0.154461991841289 S88A-P275A 0.154353681365692 S5A-W258A 0.154135468476638 C80A-W127A 0.153732682514909 H240A-V265A 0.152906530519747 I90A-C235A 0.152571641739476 V53A-A79A 0.152554080411253 F91A-H268A 0.152522354474141 G21A-G54A 0.152455879588159 I58A-A63A 0.152328402055051 Y41A-Y278A 0.151004808696233 V16A-V265A 0.150772957164421 A46A-I125A 0.150060246945823 C183A-G230A 0.149925316108213 I90A-I133A 0.149291587284228 G54A-A79A 0.148440519513768 L231A-P238A 0.147718793961184 F42A-G121A 0.147319965238589 G3A-I8A 0.146837094692289 I102A-V114A 0.14620805879475 D99A-I106A 0.145923586547367 E11A-I64A 0.14590924982059 V55A-V265A 0.145771459064343 V43A-S88A 0.145499486779631 I8A-I58A 0.145024659016054 I98A-A222A 0.144976991253752 A95A-V186A 0.144936079903939 Y7A-P256A 0.144732950518037 I96A-N274A 0.143990799540656 I8A-A263A 0.14371991574511 L94A-Y278A 0.143590120679604 S92A-C183A 0.143031872016442 I14A-I264A 0.142908769296388 C183A-L234A 0.142895166648359 A18A-I58A 0.142605332156661 R197A-A226A 0.142361135451624 Y41A-I125A 0.141806192974866 G134A-A182A 0.141674327473774 A57A-F77A 0.141657788120281 I90A-L234A 0.141591061713815 I102A-G112A 0.141543334792484 S88A-V128A 0.141532844871593 V84A-V184A 0.141374891208382 L20A-N270A 0.141236057256157 S5A-T66A 0.140462635210102 S89A-T269A 0.140311728829017 A47A-G54A 0.139952000612042 L192A-L225A 0.139568555701443 I241A-Y261A 0.139282941658975 S88A-L129A 0.138941407043484 I14A-I19A 0.138387448848952 S88A-V184A 0.138133436460885 V84A-A124A 0.138012747902184 I125A-A182A 0.137877242561604 T66A-I78A 0.137807989038754 A13A-I62A 0.137586999535131 I104A-L225A 0.137385517909317 V229A-S267A 0.137191938206439 V6A-A61A 0.136772658557908 N22A-V272A 0.13659438246336 I96A-T115A 0.136330288226169 L17A-P275A 0.136289335886489 S88A-K120A 0.136143989444808 I58A-C80A 0.135734922117444 V44A-A124A 0.135503982687902 M191A-Y278A 0.135445175262024 I90A-I123A 0.135350416712105 L189A-L237A 0.135212107285521 R105A-G193A 0.1352005191292 F42A-A47A 0.135174566513676 L85A-I264A 0.134419381267449 A97A-R105A 0.133854473643831 I8A-L259A 0.133634912827046 F42A-A124A 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