[Wed Aug 24 17:19:44 2016] >Input file: TM3FB8ATD.pdb >TM segments: C90-111 MAIDEN score = -7.7420 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V106C-A111C 0.594292746249614 T101C-T107C 0.374421160018346 F103C-A111C 0.210583374833106 V94C-S102C 0.113266772911631 A92C-S102C 0.107963745278763 I100C-L110C 0.0938017842234385 V95C-G104C 0.0877693629702869 G99C-T107C 0.0872265030767858 I100C-A108C 0.0872069040539802 G104C-A111C 0.0730409310769051 G99C-A108C 0.0729193791185176 S102C-A109C 0.0675300537429528 I100C-L105C 0.0669918801950133 S102C-L110C 0.0629635329964076 M96C-G104C 0.0279523245660949 T101C-A111C 0.0248627192278672 V94C-T101C 0.0244716525103961 V97C-V106C 0.01108507911621 T101C-L110C 0.00736602260667807 A92C-I100C 0.00305494329261832 A98C-T107C 0.00294807671007469 A98C-V106C -0.0104707301626497 I100C-A109C -0.0128781865316174 V95C-F103C -0.0166858642700642 V95C-I100C -0.0233055264833339 V91C-G99C -0.0276642148262933 V97C-S102C -0.0291147429539063 V97C-L105C -0.0293124312567841 M96C-T101C -0.0370035018341714 F103C-A108C -0.042801477642179 A92C-T101C -0.0436122519903157 C90C-A98C -0.0496844249840672 G99C-G104C -0.0516701402879067 T101C-V106C -0.0620007331667596 S102C-T107C -0.0675497293863851 V94C-G99C -0.0681153245718216 V91C-I100C -0.0706007150747059 V93C-T101C -0.0740475991615073 A92C-G99C -0.0802550377866633 T101C-A109C -0.0866280292096098 M96C-L105C -0.0965963145626033 C90C-M96C -0.106208530934124 V93C-S102C -0.109278165635493 C90C-V97C -0.112385372270422 V97C-G104C -0.113159122675148 S102C-A111C -0.125001696004135 S102C-A108C -0.125372099385415 G99C-V106C -0.126118251675676 T101C-A108C -0.133790693149735 F103C-L110C -0.1342020811342 V94C-F103C -0.140759841684894 A98C-L105C -0.150266153631466 V93C-I100C -0.162892971861861 V91C-A98C -0.171016786237031 I100C-V106C -0.177236035460171 M96C-S102C -0.191851157691965 V93C-G99C -0.195442300028828 V95C-T101C -0.201869301441246 C90C-G99C -0.205056048870794 I100C-T107C -0.206795383277071 L105C-A111C -0.207983787382116 A92C-A98C -0.20903821974979 A98C-G104C -0.243117188006476 F103C-A109C -0.27967879930158 M96C-F103C -0.283446737601165 G99C-L105C -0.298385829688149 C90C-V95C -0.310335407373632 G104C-L110C -0.319081212099972 V91C-V97C -0.319780436638781 V95C-S102C -0.333488481306216 L105C-L110C -0.340217589585458 V91C-M96C -0.345055075659355 V97C-F103C -0.366976811511731 G104C-A109C -0.397419832876692 A92C-V97C -0.438890422942222 V93C-A98C -0.445775345305318 A98C-F103C -0.466059395783271 V94C-I100C -0.470293458886208