[Thu Aug 25 00:16:22 2016] >Input file: TM3HZQCGG.pdb >TM segments: A4-36 MAIDEN score = -2.8998 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- BBeads pair Empirical energy ----------- ---------------- D16A-V21A 0.686280250793073 V21A-A26A 0.631085092368665 K29A-L34A 0.469019392420171 L17A-V22A 0.345901301025698 E7A-G12A 0.344624823485781 I19A-G24A 0.302063478754619 L15A-A20A 0.281067570032129 F27A-C32A 0.265542770986388 M23A-N28A 0.25416887093159 A20A-A25A 0.234357757611803 A26A-S33A 0.222533723780411 K29A-E36A 0.215844575164971 V14A-I19A 0.183754845371054 A25A-S33A 0.178746155813836 V14A-M23A 0.133129967868491 E7A-N13A 0.127348415420119 M23A-C32A 0.12155617480137 A25A-L34A 0.115708886758243 N13A-A20A 0.107464774797634 L15A-A25A 0.0989347099206137 G24A-S33A 0.0808339653267474 E4A-A9A 0.073266442577681 A25A-C32A 0.0682906843507083 K11A-I19A 0.0640335099360292 L17A-M23A 0.0625058643748329 A9A-L15A 0.0575410073375455 V22A-I30A 0.0556330247302261 D16A-G24A 0.0546380869671284 A20A-N28A 0.0522493942774317 G12A-V21A 0.0522321880129211 L17A-A26A 0.0501723570262125 G12A-I19A 0.0496149329834341 L17A-F27A 0.0492670645933728 F5A-K11A 0.0463475166389418 V21A-K29A 0.0463218041340152 N28A-V35A 0.0457627223116575 V14A-G24A 0.0391354423627557 N13A-V21A 0.0362763187304274 E4A-K11A 0.0332843153394746 A26A-L34A 0.0326179003606597 E4A-L10A 0.0275726142445907 A18A-M23A 0.0268800410225563 G12A-A20A 0.0216714318131861 L15A-M23A 0.021142082578292 L10A-A18A 0.0211286230931798 I19A-F27A 0.0167518673841382 V22A-K29A 0.0166091790691798 A18A-A26A 0.0118101021929087 F8A-V14A 0.00565282263073241 K29A-V35A 0.00525674227700534 K6A-V14A 0.00331626279766706 V22A-F27A 0.00249937986331261 V21A-F27A 8.22149176276099e-05 F27A-V35A -0.00331382355676801 L17A-A25A -0.00415148899359696 V14A-A20A -0.00555596549355153 K6A-G12A -0.00596770102548416 D16A-A25A -0.00811768133655377 M23A-K29A -0.01074848027802 A26A-C32A -0.0117022655458836 F8A-L15A -0.0165115323236371 A26A-V35A -0.0168364431684829 F27A-L34A -0.017567634717369 M23A-I31A -0.024346152826519 A9A-V14A -0.0249651884283241 F8A-N13A -0.0251466411487975 V22A-I31A -0.0274555479386809 L15A-G24A -0.0283878195656528 F27A-S33A -0.0387717891393295 G24A-C32A -0.0392654469257918 G12A-L17A -0.0395033171632369 I19A-N28A -0.0431057196556046 E4A-G12A -0.045505900332742 N28A-E36A -0.0505229948538723 L10A-D16A -0.0671382910772014 F5A-L10A -0.0797347418706811 L10A-L17A -0.0972616740269689 N28A-S33A -0.101120279211387 V14A-V22A -0.10441525081468 I31A-E36A -0.104677525078347 I30A-E36A -0.105691781349365 N13A-V22A -0.108416440996242 D16A-V22A -0.112535617507972 A18A-F27A -0.113770610060263 I19A-K29A -0.114588896578037 F5A-G12A -0.117979796608187 A20A-F27A -0.120500435706093 A20A-K29A -0.123778462406935 V21A-I30A -0.131835021798045 L17A-G24A -0.132641408134373 G24A-K29A -0.135096982858457 V21A-N28A -0.141191123981843 A18A-A25A -0.14745848622343 G24A-I30A -0.156046160494625 D16A-A26A -0.158413900653723 K11A-A20A -0.162803310831817 K11A-D16A -0.173643222627924 K11A-L17A -0.181296426053539 A20A-A26A -0.186345950097769 K6A-K11A -0.186661357361374 E7A-V14A -0.18749646594282 L10A-L15A -0.188427690883691 I30A-V35A -0.196754247176866 L15A-V22A -0.201691657589283 I19A-A25A -0.203841815827689 F27A-E36A -0.207523682224511 L15A-V21A -0.209094969744353 N13A-A18A -0.219658342142869 D16A-M23A -0.220395996006883 K11A-A18A -0.23205373838736 A18A-G24A -0.247041965342488 N28A-L34A -0.248468827536723 I19A-A26A -0.255739709175215 G12A-A18A -0.258862692253432 G24A-I31A -0.269527707276695 M23A-I30A -0.281174027328763 V14A-V21A -0.294984169547747 N13A-I19A -0.308764474850233 A26A-I31A -0.325099106338346 V22A-N28A -0.331746732586725 A25A-I31A -0.333786977028473 A25A-I30A -0.374677548008362