[Thu Aug 25 00:20:46 2016] >Input file: TM3JTYATG.pdb >TM segments: A38-44_A68-73_A88-93_A120-125_A267-319 MAIDEN score = 17.4049 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L41A-L71A 8.00407321818523 T42A-I70A 1.8314115487396 A73A-V88A 1.5668534293546 T276A-L297A 1.51074443863158 L41A-I70A 1.22692199693121 D72A-L89A 1.19116597163378 I70A-L91A 1.15145008340533 Q295A-L314A 1.08512204195254 F281A-V292A 0.887377747189648 W277A-L297A 0.831310224496415 K284A-F290A 0.815618050904423 L43A-I70A 0.811082048115715 L91A-L123A 0.800006730963159 L43A-F69A 0.79457525271541 L71A-L91A 0.791459213328096 V88A-V125A 0.788689004766692 E273A-D300A 0.764520491293814 F69A-L91A 0.75282892702563 L280A-V292A 0.70814045632014 L41A-F69A 0.696818056749959 L71A-L89A 0.688406173389245 L89A-L123A 0.682520146852454 A39A-L71A 0.677218761547264 L280A-L294A 0.652881405138801 L280A-Y291A 0.647038303471949 L89A-V125A 0.608262254668999 F69A-S93A 0.604823422344723 I70A-Y92A 0.569909266053229 W277A-L294A 0.565821225656453 N40A-I70A 0.524760882117204 L89A-R122A 0.516788334338645 L294A-A315A 0.496253123405278 S93A-G121A 0.478191548866635 S68A-L91A 0.456656376927745 I70A-L89A 0.455989499567435 A283A-N288A 0.450285547491575 S278A-L294A 0.43613844572919 N274A-M304A 0.392344399312607 L297A-A302A 0.380408687487533 L297A-W303A 0.364477203928032 W277A-M304A 0.357284958551982 T276A-W303A 0.350085493040063 F69A-G90A 0.349791300929986 Y92A-F120A 0.34728244987128 A73A-L89A 0.342526935178336 S93A-F120A 0.338807423027933 D72A-L91A 0.329942118074487 R305A-G311A 0.322681420321807 M272A-V306A 0.315433681830461 S282A-F290A 0.312725564980791 T276A-Q295A 0.305624845321173 G279A-G312A 0.30382263194175 G293A-G312A 0.295612105113688 L71A-V88A 0.291478720036397 M272A-R305A 0.288199612162178 R44A-I70A 0.287582731020757 S278A-G312A 0.284189637676269 L71A-G121A 0.276126110487095 D72A-Y92A 0.264387557195906 S278A-G311A 0.261487789198195 W277A-Q295A 0.261238275788681 V88A-L123A 0.256134982124254 W277A-G299A 0.241901283336014 T42A-L89A 0.241852744033482 R44A-F69A 0.241782036059167 L294A-N316A 0.238488363842505 T42A-S68A 0.237269899650319 Q295A-G311A 0.236765184640053 L280A-A315A 0.231460969984141 F281A-G293A 0.222988320437078 G293A-S318A 0.219013790377959 W277A-T313A 0.21590108171727 L280A-N316A 0.212965477202199 A283A-G293A 0.21045462257757 W303A-T313A 0.209789807563727 T276A-N316A 0.195129695177876 M304A-D317A 0.193112305897071 N40A-L71A 0.186458278795477 T42A-L71A 0.183998103080707 L280A-G312A 0.183267832023599 M304A-G312A 0.1786932892201 Y291A-S318A 0.177974596896499 S278A-Y291A 0.177847558139239 G270A-M304A 0.177802793251047 T42A-D72A 0.177429410362358 T276A-D300A 0.172086688154669 S282A-Y291A 0.171698394501811 A283A-F290A 0.17111460397027 Q38A-D72A 0.169179372710722 K284A-Y291A 0.167624816272858 N274A-R305A 0.16663905568427 D72A-G90A 0.166368066671756 M272A-D300A 0.165758299274064 W303A-T309A 0.16402170858902 N274A-K296A 0.163150571827357 T309A-D317A 0.162357029488636 S282A-T289A 0.161534793026995 A269A-V306A 0.160623283031672 W303A-D317A 0.1595033914882 S68A-R122A 0.158983684930456 F281A-F290A 0.157422537952641 G90A-R122A 0.156703998940033 L280A-S318A 0.148883554236493 L91A-G121A 0.14510753524062 S310A-N316A 0.143347383342685 Q295A-A302A 0.139522382800257 G90A-F120A 0.136200043612877 K296A-D317A 0.134055760320822 L294A-S318A 0.134026051733397 L91A-G124A 0.133139458416335 L280A-K296A 0.131668320465023 W277A-G293A 0.130083800488437 A269A-R305A 0.129689314158324 L280A-Q295A 0.129370429249352 W303A-S310A 0.126979479134809 T42A-S93A 0.126806118126791 Y291A-G312A 0.125009158969402 T276A-G311A 0.121575136000758 F281A-Q295A 0.121115655004427 Y291A-L314A 0.118477314648731 E273A-A302A 0.117355099175331 Y92A-L123A 0.116756675419042 G293A-T313A 0.11663336721607 G270A-D300A 0.116612226101198 A73A-L91A 0.112933109799226 E273A-W303A 0.112416271169872 Q295A-S318A 0.11235707641679 R275A-Q295A 0.112039075144226 L71A-S93A 0.111709839734245 N274A-L297A 0.109966772848571 A302A-N307A 0.109599363884416 A73A-L123A 0.109413092568189 A283A-L294A 0.10768260383764 G293A-N316A 0.10658607953216 K296A-T313A 0.104616687457143 K296A-S301A 0.103615638762111 S282A-N288A 0.102837872384869 T276A-R305A 0.0999540103927783 S282A-A315A 0.0992579910293809 L91A-V125A 0.0974229345331077 L71A-V125A 0.0972904922605844 G279A-L314A 0.0972308654845984 A283A-Y291A 0.09702990064469 G270A-A302A 0.0953913767385652 T42A-A73A 0.0944023404280276 A269A-M304A 0.0925341921462772 Y291A-T313A 0.0922813854921021 A39A-A73A 0.0921554901486026 L41A-S93A 0.0901132667550559 T298A-M304A 0.090031624755088 Y92A-G121A 0.0893392323049023 L41A-L123A 0.0877422084880628 M272A-S301A 0.0867858493662137 G279A-L294A 0.0855653351003909 V88A-G121A 0.0836328348393438 W277A-A302A 0.0821091466215687 S282A-L294A 0.0819243456351932 T309A-S318A 0.0817999669721941 W277A-D317A 0.0815671624677536 E273A-M304A 0.0804977833946277 S282A-V292A 0.0793344869017584 A269A-A302A 0.0783203212477477 L41A-V88A 0.0779588619103215 M272A-L297A 0.0751368862052768 A302A-L314A 0.0749522874305795 V306A-G312A 0.0747418283339192 Q295A-G312A 0.0746327943278393 R44A-G90A 0.0740195235705965 S282A-D317A 0.0704177058124067 S310A-S318A 0.0686514358623979 W303A-N316A 0.0680933531199619 M304A-T313A 0.067766351014328 R305A-A315A 0.0642401276645001 G279A-T298A 0.0622285669349054 A302A-G311A 0.0599600856301272 G279A-L297A 0.0588708830138887 D271A-G299A 0.0575364967619234 L43A-G90A 0.0573672321306985 A302A-S310A 0.0570144207212273 S278A-M304A 0.0570004480586896 F290A-A315A 0.0565617636407376 N40A-S68A 0.0549087368956378 G279A-S318A 0.0546886734178393 S278A-L314A 0.0539845992039787 F281A-D317A 0.0529944048923077 F281A-N316A 0.0526651581188781 V292A-L314A 0.0507820572220563 T276A-D317A 0.0483575989166942 L71A-Y92A 0.0477863412211503 D271A-A302A 0.0468307745751932 S282A-G287A 0.0461287499062928 L43A-F120A 0.0461280744077461 A267A-S301A 0.0448109871199751 S278A-S318A 0.0435216168116264 G308A-Y319A 0.04317086294121 S282A-N316A 0.0421617323072359 S93A-L123A 0.0412990190370028 L297A-G311A 0.0401342783644012 G293A-G311A 0.0389450961990705 A283A-A315A 0.0377861402835151 F69A-V88A 0.0369888609318276 L280A-G311A 0.0367361348335642 R275A-W303A 0.0365773708174396 R305A-S310A 0.0355181303136702 G279A-W303A 0.0341025778480699 G312A-S318A 0.0339468425122171 A39A-L91A 0.0329615381187538 M304A-L314A 0.0316055714294956 G279A-D317A 0.0308364096785714 K284A-V292A 0.0299934160309665 A302A-T313A 0.0289540393567882 A283A-T289A 0.0285667428815053 Q38A-I70A 0.0283493297236062 L280A-L297A 0.0283293968398608 V292A-S318A 0.0278514554418279 G293A-L314A 0.0273748372619069 L294A-W303A 0.026753413557605 S278A-T298A 0.026689201306267 G293A-Y319A 0.0258114234638374 E273A-K296A 0.0251311316876062 T42A-F69A 0.0250549101380227 Q295A-S301A 0.0247054520970666 M304A-A315A 0.0242455275174569 N40A-G124A 0.0237028057249504 S282A-Q295A 0.0235581993766724 R275A-S301A 0.0229902204716415 A267A-M304A 0.0213665161899674 Q295A-W303A 0.020094248791138 G279A-G311A 0.0199917681831145 S310A-A315A 0.019121961622973 F69A-G124A 0.0189627320874601 T276A-L294A 0.0186424866682753 Q38A-A73A 0.0174780169294166 S68A-L89A 0.016635937140677 D72A-S93A 0.0156776600456763 S278A-G293A 0.0146473085536556 T276A-K296A 0.0134753662780184 N274A-W303A 0.0123235697308814 A269A-N307A 0.0112329347883371 G279A-V292A 0.0108454793861235 A267A-E273A 0.0106924600852816 F281A-G312A 0.00999908764674196 G270A-G299A 0.00983585335241161 R305A-G312A 0.00975855016491156 S68A-F120A 0.00886039858070031 T42A-L123A 0.00552633098984323 L294A-G311A 0.00537725893021079 F69A-Y92A 0.0040731677978556 L91A-R122A 0.00158591199627622 T276A-M304A 0.00102101898548312 G90A-G124A 0.000487448091630815 Q38A-V125A 0.000392391785634327 L41A-D72A 9.03424672511477e-05 D72A-G124A -0.000539234420408263 Q295A-N316A -0.00176206381334154 E273A-L297A -0.00225311053943766 F69A-R122A -0.00229453192131324 F281A-K296A -0.00266590447317583 R305A-L314A -0.00315790715698849 V306A-T313A -0.00413398333300252 A269A-N274A -0.00457112999325032 G270A-W303A -0.00513079999577082 R275A-G299A -0.00705872910175898 S278A-N316A -0.00792839107879661 R44A-L71A -0.00880315417944555 T298A-L314A -0.00883055221481044 T42A-G121A -0.0112925904451506 N40A-Y92A -0.0115307709588919 T313A-Y319A -0.0120751575537867 S93A-G124A -0.0126529640852504 W303A-L314A -0.0140168642237004 Y285A-V292A -0.0144351028667338 G279A-T313A -0.014798094557666 L71A-G90A -0.0162710275985845 M272A-T298A -0.0173310555890258 F281A-N288A -0.0175429907841433 R275A-T313A -0.0185554476061629 F69A-G121A -0.0192597267350347 G279A-F290A -0.0201161212987162 R275A-A302A -0.0214206359934049 A39A-V125A -0.0217150762265037 G299A-M304A -0.0246747563251404 S278A-A302A -0.0260639533288058 G279A-Y291A -0.0262963241271672 D72A-R122A -0.0282054429523355 S278A-D317A -0.028256723920464 T42A-V88A -0.0316379589876536 N40A-L91A -0.0320566638100974 I70A-V125A -0.0321559208378488 I70A-G124A -0.0322343547991579 S278A-G299A -0.0346028830113001 T276A-T313A -0.0351454934906954 A302A-N316A -0.0354354730297417 T42A-G90A -0.0366359818472137 W303A-G312A -0.0366826542871528 R44A-L91A -0.0379938441298719 A269A-S301A -0.0381835959712813 L280A-G293A -0.0387517763584446 L43A-D72A -0.0387548087667983 G308A-S318A -0.0388365113788203 L297A-N316A -0.0391269550153729 L71A-L123A -0.0397410462127796 A39A-G124A -0.0401810025308089 T309A-Y319A -0.0404314691732612 A302A-T309A -0.0407791250774904 L297A-L314A -0.0415837064750026 G308A-D317A -0.0419326215119495 L89A-G124A -0.0424130045662658 G90A-L123A -0.0424756303479618 N274A-Q295A -0.0431613595226061 K296A-A315A -0.0441475682583148 G308A-T313A -0.0466371547487658 L41A-G121A -0.0472862828985674 W277A-N316A -0.0474818289709793 S278A-Q295A -0.0491137355125728 T276A-G312A -0.0501259566649861 R268A-E273A -0.050773112112489 L43A-L71A -0.0535924554051945 F281A-T313A -0.05393458022185 D271A-T298A -0.0541887107083365 K296A-G311A -0.0566278330413912 S278A-W303A -0.0567349342739298 S310A-D317A -0.0580497789983671 Y291A-D317A -0.0583973527011006 S310A-Y319A -0.0590560459573924 S278A-V292A -0.0591053477776278 W303A-A315A -0.0597160994937525 Y92A-V125A -0.0605055449242333 R275A-R305A -0.0606524391198371 I70A-F120A -0.0610719334653589 N274A-D300A -0.0627463722987951 V292A-N316A -0.0649778054585136 G311A-D317A -0.066215176118914 R305A-T313A -0.0669886362611027 N40A-F69A -0.0670115339064083 M272A-M304A -0.0674569760205408 L297A-M304A -0.0681977938791132 L43A-L89A -0.0693131247582155 K296A-N316A -0.0698824748335642 E273A-S301A -0.0701627495792522 M304A-S310A -0.0702369614587521 L41A-L91A -0.0709766244255512 F69A-F120A -0.071179460038131 L294A-L314A -0.0722100356581716 T276A-G293A -0.0727656486146217 A267A-N274A -0.0733897331235517 L280A-T289A -0.076049773572084 Q295A-M304A -0.0768992340865009 A269A-D300A -0.0786670660551272 L294A-T313A -0.0787393450942266 N40A-G90A -0.0788861946520227 Y92A-G124A -0.080280329370638 L294A-G312A -0.0803055616810413 F281A-Y291A -0.0817094583872557 L41A-R122A -0.0834860147493179 S68A-L123A -0.0850311842503788 Q295A-D317A -0.0866604270691422 T276A-L314A -0.0867125203605887 Q38A-G90A -0.0869160103543622 L297A-D317A -0.0871434161642597 L297A-T313A -0.0873041470416069 L314A-Y319A -0.0883377167429922 L297A-R305A -0.0900317367474619 R268A-S301A -0.0903073947705069 N40A-L123A -0.0904701510919752 R44A-Y92A -0.0905228840224199 S93A-R122A -0.0911275483131069 A73A-G124A -0.092073726150705 A39A-G90A -0.092263317652618 V88A-R122A -0.094188937568366 S278A-R305A -0.0943669317208591 L297A-A315A -0.0960746529645204 L43A-G121A -0.0962404866937083 N40A-V125A -0.0971886698223964 G312A-D317A -0.0974194462878581 S301A-V306A -0.0976275053218723 L41A-G124A -0.0984172677332698 F69A-L123A -0.0985399339277395 A39A-F69A -0.0991340957614557 D271A-W303A -0.100211536906795 M272A-G299A -0.100769445999041 N274A-V306A -0.103589914085434 W277A-A315A -0.103873218603312 L71A-F120A -0.104871930221072 R44A-S93A -0.105853999541079 D271A-S301A -0.10691186076193 A73A-Y92A -0.107510982369694 R44A-G121A -0.108498299499248 V306A-L314A -0.110435311342989 G286A-Y291A -0.112221105753092 V292A-D317A -0.112425466867974 R275A-A315A -0.113625063809986 V292A-A315A -0.114236285599331 R44A-D72A -0.114983145690425 W277A-S301A -0.115392019211086 L43A-A73A -0.115611660036094 R305A-D317A -0.116079956187379 W277A-R305A -0.119168046239365 S68A-G121A -0.119961021121111 L89A-F120A -0.122051864994407 N307A-T313A -0.122299914848205 S68A-G90A -0.122426486235464 G90A-G121A -0.122517054904517 A302A-D317A -0.125854495688312 W277A-W303A -0.126332594481506 R275A-K296A -0.127138099464434 R275A-L314A -0.127644059377013 T309A-L314A -0.128318982499138 K296A-M304A -0.129149321923124 T276A-A315A -0.12945199383163 F281A-L314A -0.130246246169843 W277A-G311A -0.131536151618218 F290A-N316A -0.132173207992756 A269A-W303A -0.132781264445648 Q295A-T313A -0.133476901441484 T42A-Y92A -0.134732103845059 D72A-G121A -0.13641927577486 W277A-T298A -0.136582814915487 R275A-D300A -0.13958829048142 R44A-F120A -0.139811321537798 N274A-T298A -0.141052736577668 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