[Wed Aug 24 18:50:42 2016] >Input file: TM3LNMCGD.pdb >TM segments: A72-89_A204-225_A297-322 MAIDEN score = -2.0171 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- BBeads pair Empirical energy ----------- ---------------- I215A-Y220A 0.79186872495353 L211A-V216A 0.759706443939425 K219A-I224A 0.718213094617322 K307A-I312A 0.655825759338228 K219A-P225A 0.631594230748079 L308A-V313A 0.491861701972859 S311A-I316A 0.386272234381156 I316A-G321A 0.359028228261334 L211A-S217A 0.292022035608662 G214A-K219A 0.289483522837881 G72A-L78A 0.289278904686193 I312A-D317A 0.286882437240259 T81A-T207A 0.281974022340266 K307A-H314A 0.239066549522483 G214A-N298A 0.231719373397391 V304A-I312A 0.228562534383462 P210A-V216A 0.22078121730448 S217A-P225A 0.213974167706091 N298A-Q303A 0.206458255404927 E297A-Q303A 0.193285821667353 R75A-I80A 0.179319940261541 P210A-G300A 0.16993156609626 K307A-E315A 0.158201115725855 S217A-G223A 0.15585008011407 I215A-D221A 0.152397778976306 P306A-S311A 0.146363197952709 W208A-G214A 0.146312465125571 T82A-T207A 0.145610454242084 G214A-G223A 0.142131446793002 E315A-L320A 0.139364095454683 G214A-P225A 0.134020183862306 A212A-Y220A 0.129574534747205 E315A-N322A 0.128309264484495 I215A-S222A 0.126339647956861 T207A-G214A 0.12621630946017 A212A-G223A 0.125677193281022 V304A-S310A 0.124215834884388 S309A-D317A 0.122508804650032 V313A-G321A 0.121624576777979 L305A-S310A 0.115895466775942 A301A-L308A 0.108109551305212 S310A-E315A 0.10716962930378 S309A-S318A 0.101082167226338 V216A-L320A 0.10005236372568 V216A-S222A 0.0998494494996796 G214A-D221A 0.0943070823628092 V79A-M206A 0.0937199479897464 G300A-K307A 0.087108047491021 S76A-T81A 0.0858001393579907 G214A-I224A 0.0830982270494811 T82A-M206A 0.0806924596310816 N298A-L305A 0.0789698163544603 S217A-G300A 0.0777722338651667 G218A-P225A 0.0759160421048122 Q303A-S309A 0.0745227229029881 T207A-C213A 0.0690534597534338 A212A-I224A 0.0664924637768474 A212A-L320A 0.0647088377662017 L305A-S311A 0.0623021678102273 R75A-T81A 0.0585961359615297 I215A-P225A 0.0581378217867838 K83A-G88A 0.0572118554773375 S209A-S217A 0.0560067292070721 V313A-S318A 0.0521639626611066 I302A-K307A 0.0507763696443391 G72A-V79A 0.0499092840891073 S217A-I224A 0.0492835273018675 S217A-N298A 0.049236024107957 G300A-L308A 0.0487792763761834 V313A-N322A 0.0472958893027413 L305A-I316A 0.0460801573116409 H314A-N322A 0.0449598418194492 T81A-M206A 0.0440904099145327 G214A-S222A 0.0430680661014267 I80A-T207A 0.0416950529191893 S209A-A301A 0.0395197915169216 K83A-T207A 0.0393219775004672 T82A-G87A 0.0387645732345359 P210A-A301A 0.0362458464052819 P210A-I299A 0.036065390262759 L305A-V313A 0.0358838769429362 V216A-I319A 0.0343419406647927 L211A-A301A 0.0332573549203194 T82A-A205A 0.0318922392973242 S209A-N298A 0.0309399697658128 R74A-T81A 0.0308111363641149 S217A-A301A 0.029316838053588 I316A-N322A 0.0270365733761779 C213A-G223A 0.0251916253333277 L211A-I299A 0.02484325732161 G300A-P306A 0.0229027295442403 C213A-G218A 0.0228845853105302 L211A-G300A 0.0204031039253025 W208A-S217A 0.0190515505734155 A212A-P225A 0.0173394258219064 V216A-I316A 0.0169949816613997 V216A-G223A 0.0149619723169527 S217A-S222A 0.014723861489701 E297A-V304A 0.0143916405273703 I215A-I224A 0.0129753914260089 G214A-E297A 0.0112767131149201 L211A-L320A 0.00462467889887463 W73A-V79A 0.00329647013480461 V304A-S311A 0.00251204168148078 M206A-A212A 0.00160971990036707 G300A-L305A -0.00596637101490671 S209A-G218A -0.00781319130428715 K83A-W208A -0.00927783976249641 V216A-A301A -0.0122503240271046 C213A-I224A -0.0127833622937463 A301A-S309A -0.0182879015759436 G214A-Y220A -0.0196012153187461 V79A-T207A -0.0228357809352779 A205A-P210A -0.0243612909652979 L211A-E297A -0.0264829656846972 L308A-D317A -0.0285890798874511 K307A-I316A -0.0292121149225832 I84A-K89A -0.0302311317853627 T207A-N298A -0.0303482921804115 S309A-I319A -0.0313308706123552 L305A-H314A -0.031424238548543 R74A-I80A -0.0319490635483274 S310A-D317A -0.0348161950036417 S310A-I316A -0.0357601205074936 V304A-I316A -0.035984725935764 I80A-M206A -0.0370163135721695 L211A-N298A -0.0372159237853269 T207A-A301A -0.0384538608649105 G218A-E297A -0.0407547184872383 T81A-A205A -0.0412185967211264 T82A-W208A -0.0418986525267029 I215A-L320A -0.0429263012111791 S311A-G321A -0.0433131617678579 I312A-G321A -0.0437142118856055 T81A-W86A -0.0459634909085014 N298A-V304A -0.0477079127727462 K307A-V313A -0.0484592470748657 S217A-E297A -0.0489492979029866 A212A-N298A -0.0499618511276003 D317A-N322A -0.0526120667146303 S217A-I299A -0.0539274173869932 T81A-W208A -0.0572677268541332 S310A-S318A -0.0602273867580869 Y220A-P225A -0.061610918759457 G218A-N298A -0.062527341395235 P210A-G218A -0.0655881937364573 P306A-V313A -0.0667958919616884 S311A-I319A -0.0672332012734382 S311A-D317A -0.0745103108741743 V216A-N298A -0.0751272652074654 V216A-P225A -0.075277799170693 S209A-I299A -0.0760054048208612 H314A-L320A -0.0762227209729551 I312A-I319A -0.0772225301347245 L308A-I316A -0.0772933718897184 S310A-I319A -0.0801806354202517 V216A-E297A -0.0835735929888246 I299A-L305A -0.0849465284368192 P210A-I302A -0.0857121445809095 W208A-V216A -0.089980251310801 V313A-I319A -0.0902834299275561 S309A-E315A -0.0908140942592492 M206A-L211A -0.0911049772434198 V304A-V313A -0.0936138154587445 Q303A-I312A -0.0974478046339278 P306A-I312A -0.0975747700892029 I302A-S309A -0.0995330613472998 A212A-G218A -0.101284495187834 T207A-A212A -0.101530029390068 L211A-Y220A -0.101705419409119 P210A-I215A -0.104680459883536 I312A-N322A -0.107853998333765 V216A-I224A -0.110923029149213 L305A-I312A -0.11393005595869 I299A-K307A -0.114588896578037 W208A-I215A -0.120541310518522 I299A-P306A -0.121380638429699 I312A-L320A -0.124874854627082 A212A-D221A -0.127967902742128 I215A-N298A -0.128006225017546 A301A-P306A -0.128199576474768 S311A-L320A -0.131319355126416 P210A-S217A -0.131811028797879 L308A-E315A -0.132467287848036 W73A-I80A -0.134174456396354 E315A-G321A -0.13649694664294 K83A-M206A -0.148326461221434 L211A-D221A -0.148637247452771 S311A-S318A -0.152595279705031 G72A-S77A -0.152845172548489 C213A-P225A -0.153002795920011 P210A-E297A -0.161968379145977 L308A-H314A -0.162815533517123 E297A-L305A -0.165615347958888 S309A-H314A -0.165737261280956 R74A-V79A -0.172007539323456 L211A-K219A -0.174493425994103 S209A-V216A -0.174499380714765 I302A-L308A -0.180220791757809 E297A-I302A -0.197128059597826 P210A-K219A -0.198987281263111 I312A-S318A -0.209045367783562 V313A-L320A -0.213032983545669 G218A-G223A -0.213562358125268 S309A-I316A -0.219062422035623 H314A-G321A -0.22491691039404 H314A-I319A -0.229740831711696 S209A-I215A -0.240230667959139 S209A-G214A -0.24063487681715 A212A-K219A -0.24207409462888 L211A-G218A -0.247464133199918 W208A-N298A -0.249078141745285 W73A-L78A -0.250743976887251 C213A-K219A -0.264964235525728 V216A-D221A -0.26627413837194 P306A-H314A -0.270726588463954 I215A-G223A -0.272175282489293 C213A-N298A -0.277976732685238 C213A-Y220A -0.281354764257713 A301A-K307A -0.286694872964989 P210A-N298A -0.289332912916345 G218A-I224A -0.297929734675454 C213A-D221A -0.311270702128113 I299A-V304A -0.319011129414893 V304A-S309A -0.348911374345975 A212A-S217A -0.412790408747835 Q303A-L308A -0.475559878532422 W208A-C213A -0.487926387880418