[Wed Aug 24 17:40:54 2016] >Input file: TM3PJSATD.pdb >TM segments: K26-47_K86-110_M25-47_M87-110_L26-47_L87-110_N26-48_N86-110 MAIDEN score = -59.2653 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V39L-V95L 1.24414932339483 A47N-R89N 1.08350012034465 A47M-R89M 0.997245761338878 A47K-W87K 0.881059472950504 V39M-V95M 0.828768670080998 V39N-V95N 0.811925302050591 A47N-W87N 0.80736345841346 A47L-W87L 0.780201975703489 A47M-W87M 0.775282287766006 W26L-A109L 0.684063214744806 G43N-V48N 0.677754784785431 L36M-A98M 0.672135650867686 G43L-V94L 0.65885154006751 A29N-L105N 0.658341217774994 W26N-A31N 0.651658212951921 W26K-A31K 0.650606507273931 W26L-A31L 0.649961283420787 W26M-A31M 0.649366938022691 L46N-V91N 0.645050984397065 A42N-V91N 0.637520603388457 L46M-V91M 0.631212409000259 V39K-V95K 0.627797354720879 F103K-I100L 0.612583867635585 I100N-F103M 0.606829067002777 A42K-V95K 0.590804286636305 L40L-V95L 0.572836562031673 L46L-V91L 0.565566513345561 L36M-S102M 0.561496828369717 A29N-V106N 0.549147873914478 V48N-G88N 0.543298748103123 A32L-L105L 0.537016579709918 L36N-S102N 0.529399627370873 L40K-V95K 0.528973183146849 A42L-V91L 0.511670980675747 V39M-A98M 0.510497518811679 G43M-V91M 0.483296107052445 L46K-V91K 0.460142360336664 L40N-V95N 0.455126395112302 W26K-A109K 0.449123021814112 A29L-V106L 0.448050018182433 A42L-V95L 0.447262156824961 A32K-L105K 0.442876552482725 A47K-R89K 0.440049439777475 A32L-S102L 0.439678265953704 A29M-V106M 0.40730955425635 L36N-A98N 0.40493782185515 A42K-V91K 0.398529855495843 T33N-S102N 0.394725740639148 R27M-A32M 0.389394079288034 V39M-V94M 0.389306666538158 A29M-L105M 0.380576551731502 Q25M-G30M 0.378927203635245 A32K-A109K 0.37788308072161 T33M-S102M 0.37757913345095 A42N-A98N 0.375877163530388 A32K-A108K 0.369163189389554 A28N-A108N 0.364279946159975 L36L-T101L 0.358557409958608 R27N-A32N 0.356282559459206 A42M-A98M 0.355803296182487 T101N-T107M 0.354802150015924 V39K-V94K 0.34782742771261 T33L-L105L 0.344574531681981 L36K-G99K 0.342631628392764 A31K-A109K 0.338798803630867 G43M-A92M 0.337698562437169 V93N-M96M 0.336433635386711 M96N-V93K 0.336433635386711 V93M-M96L 0.336433635386711 I100M-F103L 0.336375041905394 G104M-T107L 0.330316964258808 A32N-G104N 0.327777167827071 A92K-G99K 0.326164493432681 A28K-G104K 0.323761759910456 A42M-G88M 0.32370510703712 A47M-A92M 0.323530704998332 A92N-G99N 0.32289201705538 A32M-S102M 0.322309335265748 V97N-M96M 0.321821928607205 A32M-G104M 0.318792418135785 T33K-T101K 0.316476321254271 A32M-A109M 0.313801307136224 G99K-G99L 0.313689661417671 F103N-I100K 0.312333675077883 A42K-A98K 0.312023792811631 A31L-A109L 0.311881525828247 A28L-G104L 0.308071697233819 A92M-G99M 0.304238558357484 R89L-V94L 0.301764698293386 V37K-M96L 0.299285053850554 A28K-L105K 0.298927265418801 G30L-G104L 0.297146754409107 A28L-L105L 0.293314841315978 A31N-S102N 0.291277951946416 L36K-T101K 0.286226745925132 G104M-A109L 0.285686897285141 T107K-T107L 0.283120132001281 R27L-A32L 0.28303868147874 V34K-V39K 0.282474661107988 L46N-G88N 0.282087329174753 V34M-V39M 0.281417203672273 V34L-V39L 0.280459905799582 V34N-V39N 0.279012310221068 T33N-T107N 0.278897885496535 A29K-A108K 0.275767455476361 W26K-T107K 0.275487568446828 G30K-G104K 0.274643843207251 L40N-Y45N 0.274259184353602 A29M-A109M 0.269922209654298 G30N-S102N 0.268580673111056 Y45L-V93L 0.268038069326892 L35M-G99M 0.26767775402333 A42N-G88N 0.264380736757487 A29N-A109N 0.262625781122739 G43L-W87L 0.260505468471355 G30M-S102M 0.260028216828317 G30K-A108K 0.257520666591538 V39K-V91K 0.256764806821526 Y45N-R89N 0.255896598564017 L40M-V95M 0.254739986396131 A32M-G99M 0.253998417331404 L36L-G99L 0.25378394269313 T107N-T101K 0.252063936390201 G43K-W87K 0.251802879608187 W26L-T107L 0.250081933145228 A109N-G104K 0.249306453356536 M96N-V97K 0.248288461880181 G104K-F103L 0.248277107997888 L46K-G88K 0.24702825587349 L46M-G88M 0.246823087121179 T33K-T101L 0.246736458995067 G43N-A92N 0.241082751950903 G104M-L105L 0.241042409532807 F103N-G99K 0.238919318638271 T101M-L110L 0.237953992915149 V39N-A98N 0.237648854496847 A92L-G99L 0.236616788188129 A32L-A108L 0.236108530818669 A47L-L90L 0.234971056106874 V39L-I100L 0.232895375234109 R27K-A32K 0.231645352937996 F103N-G104M 0.228417802095236 A42L-A47L 0.227551434002093 I38M-V94M 0.225672603666197 V39N-V97N 0.224317036801637 G104N-L105M 0.224223976569432 Y45M-V94M 0.222561972903319 A28M-S102M 0.222349125007589 G88N-V95N 0.220568488423666 T107K-T101L 0.217444281964937 Q25M-T107M 0.216792530825511 I38K-G99K 0.21611711967559 I38L-G99L 0.21602446931828 V97M-G104M 0.215593863045187 G88L-V95L 0.214506667264251 V97K-G104K 0.213835216402094 Y45K-R89K 0.213823005383517 V97N-G104N 0.213671672508077 V37N-M96N 0.213037640200282 G88K-V95K 0.212081804193969 L36L-V97L 0.211161811355406 L36L-S102L 0.210890459723967 A32M-L105M 0.210143262892394 G99K-T107K 0.210104214393856 G43K-V94K 0.209429146729539 G43K-V97K 0.208474154875045 L90N-V95N 0.208429787018212 L40L-A98L 0.208347514600594 L41K-V95K 0.207894611220172 V97M-S102L 0.206951127503346 L36M-V95M 0.206501500949176 V39N-V94N 0.206087642517656 G99L-T107L 0.205922023287282 G30K-T101K 0.205724354346716 G99M-T107M 0.205398790340045 L90L-V95L 0.20537032726162 V93N-I100N 0.204208467869147 L36N-V95N 0.20381976172643 A29M-G104M 0.202836362341987 V37M-M96M 0.202761248794404 L86N-V91N 0.202437407307976 I100N-T101K 0.202219917432779 L40M-Y45M 0.201413881612018 R89K-V94K 0.201394310834298 S102K-S102L 0.200428137345671 G88M-V95M 0.200292516517661 L46L-W87L 0.200167379954859 A42N-A47N 0.199945505854401 R89M-V94M 0.199867914754652 T101N-I100M 0.199717379464641 L40L-Y45L 0.199645491670178 L90K-V95K 0.199588932656596 L41M-M96M 0.199419460587552 Y45M-R89M 0.198304004844603 T101K-T101L 0.195903975038237 L36K-S102K 0.194252810955683 A32K-S102K 0.194056332795776 G43K-A92K 0.193458383168678 A31N-T101N 0.190986182903174 T101K-A109K 0.190939245854691 A28N-T101N 0.189878965319439 T107N-T107L 0.189351870345854 A42M-A47M 0.188926717890041 G104N-L110M 0.188835988054041 T107N-G104M 0.18878416104663 A28M-T101M 0.188462768098686 T101M-A109L 0.188117475241825 T107M-A108L 0.187120726291943 G99N-T107M 0.186955966324214 G30M-A109M 0.186182754340633 A31N-I38N 0.185749762435346 G99K-T101L 0.18178700102094 M96L-G104L 0.181718563593151 L41N-M96N 0.181144546790872 G99M-F103L 0.181101466308006 V106K-F103L 0.180896712895652 R89N-M96N 0.180688828329531 A47N-A92N 0.179071311868464 A32M-T107M 0.178899133893355 L90M-V95M 0.178495787380219 L35N-G43N 0.177867985915782 L35M-G43M 0.177798700404965 R89M-M96M 0.176790934462376 A108K-A108L 0.176415820522662 G43N-W87N 0.175930172096329 L40K-Y45K 0.175614539995729 T107N-A98K 0.175338892613951 R89L-M96L 0.174949205817451 R89N-V94N 0.174905908813334 S44L-V94L 0.174350011838383 R89K-M96K 0.173947778671856 S44K-L90K 0.173868376875307 T107M-G104K 0.173371973882156 T101N-T101M 0.173325276979421 T101N-T101K 0.172917006866126 R27M-A109M 0.172694424957911 S102N-L110N 0.172009731258163 L35K-M96K 0.171846151593566 V34N-V106N 0.171436881672499 V37N-V97N 0.168946829547785 G99N-T107N 0.168160998275983 L35L-A98L 0.167898845353207 A108N-V106M 0.166463263399355 A31M-I38M 0.164757742504423 A42L-R89L 0.164377881978963 W26N-L110N 0.164035481192953 A31M-G99M 0.163565373116315 A98N-G104M 0.16331825462739 G30N-A98N 0.16309135133011 T107K-A109L 0.163080027194956 L41K-G99K 0.162696995855074 L36M-T101M 0.162395334328973 A108M-G104K 0.162388366107788 T107K-L105L 0.162369877263679 S102K-L110K 0.161935761118081 M96M-G104M 0.161532022183507 G104K-L105L 0.160710226678782 F103K-A98L 0.159888306730048 L46L-G88L 0.159297648054095 G99L-A108L 0.159130402896148 M96K-G104K 0.159128333000799 A29N-F103N 0.15838518563244 G99N-A108N 0.158355732996751 R27L-A108L 0.156566530575272 A32N-F103N 0.156285556363686 V37M-V94M 0.156087267083407 T107N-G104K 0.156021527406473 S102K-F103L 0.15525719033303 V37K-V97L 0.155057949821735 V39K-I100K 0.153411111544809 V93L-I100L 0.153324545261873 S102M-L110M 0.15294834496415 G30L-T107L 0.152172823664596 A32L-G99L 0.151771992051429 A31K-I38K 0.151345875237203 V93K-I100K 0.150872595240942 A108N-I100K 0.150305051442464 I100N-A109M 0.149758696306271 A42M-R89M 0.148857545317486 A31L-I38L 0.148701424040106 S44K-R89K 0.148497666192539 L105N-G104K 0.148220236619364 L36M-G104M 0.148110577768213 V95K-I100K 0.148037704057906 L86K-V91K 0.148000850218867 V95M-I100M 0.147683577835528 Q25M-A109M 0.147636312823274 G99N-M96K 0.147473899073809 V95L-I100L 0.147107393962051 L46M-W87M 0.146881946236473 G30L-A108L 0.146698794377642 G99M-V106M 0.146647940765171 G43N-V97N 0.146408305503847 I38M-T101M 0.146203388883883 G30L-T101L 0.146137299808184 S44L-V91L 0.14595824870184 A42K-A47K 0.145304495847522 V95N-I100N 0.144646411977908 V39N-V48N 0.14461957844609 V93N-V34M 0.144271785113159 L35K-G43K 0.143976282101597 T107K-A98L 0.143893352486261 A42N-V97N 0.143381194623622 A32L-T101L 0.143030787602486 G43L-G99L 0.143016491611375 L36N-G104N 0.142874848769022 T101N-T33M 0.142712522167396 V37L-V93L 0.142441285470899 V37N-V91N 0.141778973988608 T107M-T107K 0.141442778497398 V37N-V106N 0.141249732791097 S102K-T101L 0.140987268459892 A31M-T101M 0.140756378733644 M96N-G104N 0.140656714745189 Y45K-M96K 0.14056576958017 M96M-G99L 0.140396113395403 R27K-A108K 0.14039231695297 A29N-G104N 0.140296857427377 T107N-S102K 0.140067825261147 V34K-V97K 0.140035125850873 T33M-T107M 0.139990425873261 V106K-S102L 0.139698615159102 A42K-R89K 0.139428385404234 A29K-I100K 0.139133677220543 T101M-T101L 0.138973779903651 G99L-V106L 0.13751344391088 L110N-S102K 0.137316876818645 V97L-G104L 0.137257778722649 V94M-S102M 0.137064829503929 Y45K-V93K 0.136277784930702 V97N-V34M 0.13611598498133 S44K-V94K 0.135803944199376 L41L-G99L 0.135746504010704 V95K-V93L 0.135666748692644 V94K-S102K 0.135130490355474 Y45N-L90N 0.134852994742473 S44L-V95L 0.134708272072944 V94N-S102N 0.13384686822644 G30K-T107K 0.133673215200394 V97K-V106K 0.133242009612863 A47K-A92K 0.132965548201458 V94L-S102L 0.132660459212441 T33M-G104M 0.13256297319439 L35L-M96L 0.132153085295103 A29L-A108L 0.131361360207717 A98N-F103M 0.130920377685013 L46M-V94M 0.12976579295956 Y45L-M96L 0.129620537728753 L90L-V97L 0.129406335282292 L35K-V95K 0.12933951159184 V97L-V106L 0.12917786623273 S44N-V94N 0.128622396515277 L40L-V93L 0.128074542642241 T107K-S102L 0.127281123012777 S44N-V93N 0.12644853258382 V34L-L105L 0.126114197709322 L40K-V93L 0.125735352713494 A98N-T107M 0.124871801112675 A42N-R89N 0.12418527571229 A32N-G99N 0.124158354091664 G30K-I38K 0.124134538362528 F103M-G104L 0.123897234474903 G30M-I38M 0.123642891964947 I100K-G99L 0.123476227334235 G30N-I38N 0.123130864265404 V97N-S102N 0.123042280129455 S44M-V93M 0.122861848227874 S44N-R89N 0.122535424383543 Q25M-S102M 0.121657900675029 L36K-S44K 0.121156032443931 G99M-G104L 0.120843302956259 G88N-M96N 0.120789165631501 L40L-L90L 0.120741230279483 A98M-V106L 0.120705997800881 T33N-A108N 0.120613053904433 I38N-T101N 0.120387400238026 G88K-M96K 0.120377135545313 S102K-G104L 0.12030396667671 S102N-T107M 0.120298668201583 A42K-L90K 0.120126916515459 L90N-L40M 0.119995579881929 S102N-V106M 0.11983280261298 V97L-S102L 0.119157872577363 A109K-S102L 0.118963610480876 G88M-M96M 0.118958527256981 V34N-A42N 0.118947895494867 V34M-A42M 0.117606188010851 T101M-I100L 0.117606147244527 G88L-M96L 0.117594880143297 G99M-G99L 0.117175345214735 G99N-G99M 0.117173660323084 L35N-I100N 0.117132515673763 V97N-V106N 0.116783877052779 A29L-V37L 0.116535143651844 T101N-I100K 0.116387448015522 V39N-G99N 0.116057733031206 A31L-G104L 0.115950513839592 G30N-A108N 0.115923604118544 V34L-V95L 0.115799722157581 V94L-G99L 0.115531452792765 M96N-G99M 0.11552800875894 L41L-A98L 0.115444498696716 Y45N-M96N 0.115419668222486 F103N-S102M 0.115322967466311 L105N-V106M 0.115269325595855 A29K-V37K 0.115175656061083 G30L-I38L 0.115103022219161 L36L-A109L 0.115097169637355 V106K-I100L 0.114983529401396 A47M-V91M 0.114800122238428 L40L-V94L 0.114402358113612 I38N-A92N 0.114358792311292 A32K-V97K 0.114244092297807 A29N-V37N 0.114241842293167 V34L-A42L 0.114231385523613 Y45K-L90K 0.114107567818162 G104K-V97L 0.113690799552766 Y45N-V94N 0.113271285597909 A29M-V37M 0.112760763867763 S102N-A109M 0.112604269421701 V97N-G104M 0.11235204892646 V34K-T101K 0.112034137615291 G99N-I100M 0.112001341417995 L90M-V97M 0.111779676959573 A31N-V39N 0.111619324941599 V94M-G99M 0.11151101210357 R27N-A109N 0.111387033701365 G43N-V94N 0.11119153909827 V106N-T107M 0.111042576410617 V34N-G99N 0.11078368163556 V97N-T33M 0.110705471963063 A32L-A109L 0.1106502377203 V34K-A42K 0.110539722450494 G43L-V97L 0.110119907168867 T33L-G43L 0.110103611488082 L35L-V95L 0.109845200743723 T33K-V97L 0.109810251778922 L46K-L86K 0.109671488393867 A31K-A108K 0.109097879730775 L90N-V97N 0.108959349558995 A28L-V37L 0.108947780012056 L36M-G99M 0.108928693981221 A32M-L110M 0.108751530700312 G43K-V93K 0.108083416132521 A32K-L110K 0.10782452211677 A108M-G104L 0.106786861215262 A42K-G99K 0.106759240180439 A42L-G99L 0.106602240435219 A28N-G104N 0.106424248699697 L105M-V106L 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