[Wed Aug 24 17:23:06 2016] >Input file: TM3T56ATD.pdb >TM segments: A12-26_A399-412_A449-463_A482-501_A538-551_A930-944_A980-995_A1016-1031 MAIDEN score = -28.2617 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- E412A-P983A 2.47111410939556 L540A-I1030A 1.22806473049416 L492A-I497A 1.22300544296062 L995A-I1017A 1.21619506164228 I457A-E939A 1.1495272089894 L933A-M1016A 1.13368577085026 I992A-I1017A 1.12397831990161 A493A-P498A 1.00009724947387 I456A-E939A 0.965965450362988 I457A-V936A 0.958803270162396 R13A-V496A 0.897673744925425 D405A-V990A 0.888917887410712 V943A-R980A 0.772059388054673 V943A-K984A 0.732157020173774 V409A-K984A 0.709958230537531 I992A-M1020A 0.709072529784734 L450A-V942A 0.707838068844984 L450A-E939A 0.699600053762655 R13A-I499A 0.692308262623269 I456A-G935A 0.680931811344523 A932A-M1016A 0.672683010429262 L454A-A490A 0.669500983415602 V400A-G994A 0.647476608339628 M403A-A485A 0.644768523125574 L455A-A487A 0.639975705027561 F461A-A932A 0.633484846961179 V404A-A489A 0.626393882428687 L995A-M1016A 0.62459044890032 F451A-A490A 0.622928651221624 I452A-E939A 0.616594363074423 R13A-V495A 0.608615852000913 L933A-M1020A 0.607917009120652 F461A-T483A 0.594030362670482 S453A-E939A 0.57028280426956 I991A-M1020A 0.559262751879251 L17A-V496A 0.559029390798512 I457A-A938A 0.558442330558861 F930A-M1016A 0.538697324569137 F461A-I931A 0.528215710100491 A402A-M486A 0.509667676423781 R980A-A985A 0.506258275113449 T458A-A487A 0.505246993014369 F461A-G935A 0.501558490647589 A402A-V990A 0.500716846704107 V409A-T987A 0.500376964597065 A402A-T987A 0.492714948864059 A406A-L450A 0.491911939252686 T539A-I1030A 0.479276011083147 I992A-I1021A 0.472115773373534 E939A-P1024A 0.46989472866587 I408A-M986A 0.458819753222486 I408A-P983A 0.457338475970324 A1023A-L1028A 0.457335401231395 I408A-T987A 0.457251723011069 M403A-A489A 0.448110779675974 S460A-A934A 0.435173130654042 I411A-M501A 0.435047585862113 L454A-M486A 0.42443085918417 A399A-M486A 0.420735170657955 I992A-M1016A 0.413458015459495 T458A-E939A 0.411074188999741 E412A-P498A 0.410536268037267 S460A-A932A 0.39753291802998 I456A-A938A 0.393988137040655 R980A-L1028A 0.391123232624615 A449A-V943A 0.390024084845671 I457A-G935A 0.389563463916085 L454A-A487A 0.383643314562234 M403A-M486A 0.382425365179817 A406A-A485A 0.37854080509198 A543A-A1023A 0.376360729231339 T458A-G935A 0.37468071418098 L491A-V496A 0.374013600424946 V409A-P983A 0.364576005474685 E939A-P983A 0.363811738560265 A406A-A490A 0.361753743193576 A406A-A493A 0.361654714351298 A20A-L492A 0.360963033261873 A985A-A1023A 0.357748389530424 A485A-A493A 0.354882699761858 V16A-V495A 0.348867755416515 A449A-A490A 0.344537828604343 A938A-A1023A 0.343383873414528 A543A-L1026A 0.337706544640855 A402A-I991A 0.337121011032467 A937A-K984A 0.336925287525946 V988A-M1020A 0.336497072217372 A399A-A487A 0.335023038887049 I411A-P498A 0.333552107866083 V16A-V496A 0.331080050152641 D405A-V943A 0.324882570428546 S24A-A485A 0.320118443787929 L450A-V943A 0.318075256508931 D405A-V936A 0.314375778846665 I457A-A932A 0.312556719826787 G941A-I1031A 0.310265874768808 S453A-A934A 0.309061765969389 G401A-T987A 0.307445923087345 V936A-M986A 0.305918709183702 G401A-G935A 0.301629744194568 L455A-E939A 0.300702248289654 I991A-M1016A 0.299528704573024 K482A-A487A 0.296975709137463 A399A-K482A 0.294841509269629 D405A-M944A 0.293893958912689 I457A-M486A 0.293262573983835 V988A-I1021A 0.29218990431434 L454A-A938A 0.289159369266241 E412A-K984A 0.283305490744876 A399A-A406A 0.282362228412937 G994A-G1018A 0.277563540995316 N12A-P498A 0.276800919848113 S24A-G488A 0.276081090004738 L17A-V495A 0.273585766307496 A399A-A489A 0.265367774502157 M410A-V988A 0.265120893682811 G401A-A489A 0.259491979207596 M403A-V495A 0.255260034634418 M944A-I1031A 0.254618003727524 A407A-I497A 0.253511817138277 M944A-L1028A 0.250144102356064 A402A-A993A 0.246880288042865 M410A-R982A 0.245908966205391 F930A-G1019A 0.245785150186055 V404A-Y484A 0.243656843784022 M410A-R980A 0.239468223704657 G401A-I991A 0.234256792475854 R13A-M501A 0.234189942542941 D405A-M501A 0.232918241197268 V990A-I1021A 0.232523947800296 T538A-L545A 0.225711885476681 E412A-R980A 0.22495964954986 P983A-L1028A 0.223787667628985 S546A-L551A 0.223624414494023 V988A-G1019A 0.216654446634652 G1019A-S1027A 0.216133275738692 A489A-I494A 0.214669143464085 V936A-M944A 0.214376189325638 V400A-M1016A 0.214225390596613 I408A-V988A 0.213427215876989 M944A-R982A 0.213211919421293 A985A-S1027A 0.210832365766764 S546A-P1024A 0.209600637645286 V404A-G994A 0.208928081411608 T987A-T1022A 0.208481528669696 S460A-L933A 0.206930135726542 V988A-P1024A 0.206305041969235 M410A-L454A 0.201987306883995 F451A-V943A 0.201535505841968 G401A-A485A 0.201114899337907 T538A-I1031A 0.200750448282241 E412A-R982A 0.199659072634316 G941A-P983A 0.19901290689311 V400A-I992A 0.198114610138026 M944A-L1025A 0.195504697026005 V990A-M1016A 0.193270681057227 A490A-E939A 0.192947409156474 A20A-A493A 0.191861037168847 F940A-A985A 0.1917603873527 A985A-T1022A 0.190275782660003 V943A-R982A 0.189220232125453 A402A-A932A 0.188837546139224 S453A-A489A 0.187049984344032 I457A-T483A 0.185951275691369 V981A-M986A 0.18393938455951 G941A-G1019A 0.18376350079809 M986A-L1025A 0.183360531009249 G941A-I1030A 0.182548184920298 M410A-L491A 0.182428702620733 R980A-V988A 0.181884282830487 L450A-K984A 0.180919999662215 A989A-T1022A 0.179184667649706 L21A-G488A 0.178278242760617 G401A-P983A 0.178246162206802 N12A-L492A 0.176502473518965 A449A-I456A 0.176356140826238 L541A-S1027A 0.176204978883217 E939A-T987A 0.174016751246588 M944A-K984A 0.173182519072014 L933A-G1019A 0.172163072675368 S460A-M1016A 0.171317684183102 L545A-V550A 0.170248787220248 A406A-A489A 0.16975168220285 I408A-K984A 0.169501116948196 T549A-T1022A 0.169416530128406 F451A-T458A 0.16730984633433 A937A-T987A 0.16649266705969 A932A-G941A 0.166021683173216 M403A-G935A 0.165672670986766 L17A-G488A 0.165530953003035 A402A-V943A 0.165138263334898 I408A-A985A 0.164412778640752 A932A-I1017A 0.163708434985104 S453A-L491A 0.16263458517721 A490A-G935A 0.162298704479795 V409A-A489A 0.161778850759969 A485A-G935A 0.161751038492636 A543A-G1019A 0.161636831452177 A449A-G935A 0.161636831452177 R980A-S1027A 0.160586484748426 S24A-M486A 0.160330019358391 V404A-V496A 0.158527200682438 V990A-I1017A 0.157991782112239 G401A-A407A 0.157759231466388 M410A-L450A 0.155600290617237 V400A-A490A 0.154631306813571 G994A-G1019A 0.152814085830293 D405A-M986A 0.152538555925191 V409A-R982A 0.151883751402384 Y484A-A489A 0.151663227769417 A402A-I992A 0.151162046852062 M403A-I411A 0.150848130781533 I991A-I1017A 0.150644658354084 I452A-A489A 0.150271133630772 G941A-K984A 0.149766604080404 A934A-I1021A 0.14961596769 I452A-A493A 0.149609138693827 A937A-I1030A 0.149465187967683 A407A-E412A 0.148995512547824 G935A-G1019A 0.147346353909804 D405A-A985A 0.146611199352186 R13A-A20A 0.14569352567833 G941A-M1020A 0.145255446540486 G401A-M1016A 0.145082093775986 A407A-M486A 0.144384673374299 L454A-G941A 0.144146013492064 A543A-I1031A 0.143982235928778 I452A-M944A 0.14385260559774 S453A-V943A 0.14345210174641 M403A-G994A 0.143403749358419 A407A-M986A 0.142523891322959 A449A-I457A 0.142470599776521 A937A-I1031A 0.142396433127504 E939A-I1031A 0.141746150051616 I457A-A489A 0.141719724461626 G19A-G488A 0.141257823063263 G401A-A934A 0.140211576255186 V404A-G488A 0.13910392924158 G488A-V496A 0.139044618343269 G401A-L454A 0.138496269139987 G401A-G1018A 0.138040989122983 A937A-M1016A 0.137966433662683 M410A-V942A 0.137791822722733 I457A-I931A 0.13746870669967 V400A-V409A 0.136442032485697 V409A-E939A 0.136193137645537 M410A-A490A 0.136016337867106 T1022A-S1027A 0.13571287522281 A20A-I497A 0.135463499581524 K984A-I1021A 0.134742653784323 I456A-Y484A 0.134412643468362 V936A-V990A 0.133946442687783 G941A-P1024A 0.13358083870001 M403A-A490A 0.132775860326261 A406A-A985A 0.132709372100411 V16A-S24A 0.132311464404591 A934A-S1027A 0.132175802323867 D405A-M410A 0.130042610955387 A406A-M986A 0.129555580000543 A993A-I1021A 0.129520083293063 N12A-L500A 0.129230474151623 V542A-S1027A 0.128871499277322 L23A-Y484A 0.128653149814264 I408A-I497A 0.128616944383471 V409A-V496A 0.128579061322667 T1022A-I1031A 0.127854153142638 G401A-A493A 0.12745209426998 A399A-V988A 0.126454157011719 L540A-L1025A 0.126249708519558 T1022A-F1029A 0.125488862738536 A934A-V942A 0.125448973183549 L15A-I494A 0.12518274909503 T483A-I931A 0.125104165593921 E939A-I991A 0.12434400912098 V942A-P1024A 0.124047917762026 L454A-E939A 0.123365338812768 I408A-I499A 0.123219145210794 L454A-L933A 0.120551413622957 L933A-G941A 0.120380170479283 E412A-M986A 0.119882391265267 I457A-A934A 0.119412639373611 R13A-L500A 0.119133122750611 V400A-A932A 0.118829921941675 K984A-I992A 0.117705480146457 L454A-A493A 0.117176619164695 S24A-A493A 0.116715893973168 L459A-V936A 0.116235240809751 S453A-A485A 0.116117709616538 V547A-A1023A 0.115910102625286 A932A-A1023A 0.115731721420296 L459A-G935A 0.115683445019955 T458A-K482A 0.115536964776358 S24A-L492A 0.115506030731506 L450A-A489A 0.115260167199061 A20A-I499A 0.115129971560584 A487A-V495A 0.114752918365037 L23A-A493A 0.114665874830247 V404A-A993A 0.114179852493302 L455A-T483A 0.114078975130361 T458A-M486A 0.114053410363129 M486A-I497A 0.114010098235183 K984A-T1022A 0.112845238918982 A402A-M986A 0.112028953076637 V942A-S1027A 0.111908705119377 V404A-P498A 0.111749738655764 D405A-I991A 0.110937910246055 I457A-G488A 0.110575100170429 A402A-S460A 0.110502237286112 G401A-K482A 0.110229980200853 A20A-A490A 0.109505923284655 A402A-G488A 0.109381988972117 G401A-I457A 0.109248221130487 S460A-V936A 0.108646015686233 A402A-P983A 0.108391382809371 A487A-G935A 0.107974335829367 E412A-I497A 0.107776305814995 G935A-F940A 0.107585211325182 V404A-V943A 0.106309658410008 A407A-S453A 0.106259318823855 I457A-M1016A 0.106082927391568 R13A-A493A 0.10562407589076 A932A-G1018A 0.105486696097917 L933A-L995A 0.104271225689478 V990A-T1022A 0.104018455612096 V409A-L454A 0.103995639905563 A402A-L995A 0.103565693800293 S24A-V496A 0.103061517161708 A544A-A1023A 0.102878866714209 A938A-V988A 0.102147124551561 A985A-M1020A 0.10190053594204 L455A-Y484A 0.101793522751536 K482A-G935A 0.101736586484232 S453A-A493A 0.101678876720292 A399A-T458A 0.101135686976612 V16A-G488A 0.101125997019386 G401A-A985A 0.101089026290425 G935A-I991A 0.101008028397459 T458A-G488A 0.100961508246542 G401A-M1020A 0.100783887098026 V404A-K482A 0.100662450866139 K482A-I931A 0.100332042084746 A937A-T1022A 0.10024577494704 G19A-I497A 0.0995775039462843 G935A-G1018A 0.0987053926781609 A985A-L995A 0.0984112729983959 K482A-V936A 0.0978836184770073 L541A-L1028A 0.0978199564869633 T987A-P1024A 0.0978021195361816 L21A-L491A 0.0977756850505429 D405A-V942A 0.0976323142422437 I457A-A937A 0.0975788454040476 L933A-L1025A 0.0975346220225877 V936A-S1027A 0.097393900052257 D405A-S453A 0.0973791239410233 G935A-I1017A 0.0973544537789576 M986A-M1020A 0.0971103512806339 L491A-P498A 0.0969858446929055 A407A-I499A 0.0969633604120621 V400A-T483A 0.0967772993278737 M403A-M986A 0.0967092900706601 L540A-L1028A 0.0965765288260236 L933A-V988A 0.0964762817205904 V542A-F1029A 0.096001375782369 A934A-G1018A 0.0959975177517824 A989A-G1018A 0.0957658444330054 S460A-A487A 0.0956258463541824 S453A-A932A 0.0950889606191749 G401A-K984A 0.0948852297838865 A402A-L933A 0.0947770192980393 A490A-I497A 0.0945699535399225 I452A-V942A 0.0944424981244687 A490A-L500A 0.0943175758541273 A993A-I1017A 0.0936627661694676 L450A-P498A 0.0934729942064667 L17A-A407A 0.0933027825616506 D405A-V981A 0.092948670215601 V981A-L1028A 0.092692444369554 L455A-L933A 0.0923590231322025 A407A-V495A 0.0922942422274031 A406A-F940A 0.0922640075976027 M410A-I452A 0.0920793131371731 S453A-V942A 0.091921332517594 V936A-L995A 0.0916712013180416 A402A-T483A 0.0916343489649027 A402A-P1024A 0.0914388548323251 I457A-A487A 0.0912913106033417 D405A-K482A 0.0911375354801668 T458A-V942A 0.0908531544792335 V404A-V495A 0.090773779895617 L455A-A489A 0.0906098774634168 A938A-S1027A 0.0905605035412078 L454A-T483A 0.0905015782570153 M18A-L492A 0.0902978718159525 G401A-E939A 0.0897873737638433 L455A-A932A 0.0896522950408478 E412A-T987A 0.0894620579070953 M403A-T458A 0.0891928484294364 A490A-V942A 0.0890163262870258 G1018A-P1024A 0.0889819696672243 K482A-L933A 0.0889609535432423 L23A-V496A 0.0888839718727552 A399A-L454A 0.0882453586193712 G401A-I1021A 0.0881827138055604 L455A-A934A 0.0880559869719095 V404A-A989A 0.0880350790249702 V988A-S1027A 0.0878531300136487 A932A-L995A 0.0875734742190897 E939A-T1022A 0.0873837636021877 V936A-A985A 0.0871239724569017 F22A-L491A 0.08706796590362 I452A-L492A 0.0870097380570225 V981A-L1025A 0.0869518603071473 T458A-A490A 0.0866335905073594 L21A-A489A 0.0862542413460139 A406A-I452A 0.0862346596047305 A20A-L500A 0.0862322793443067 L17A-L492A 0.0861230112133091 I411A-L492A 0.0860479245896428 P463A-A934A 0.0860308617875507 V400A-Y484A 0.0856226019650412 A934A-E939A 0.0855959086303471 A937A-V988A 0.0854510003996563 T539A-S1027A 0.0854045346008583 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