[Wed Aug 24 17:25:44 2016] >Input file: TM3T9NATD.pdb >TM segments: A16-48_C16-48_B16-51_E16-48_D16-48_G16-48_F16-48 MAIDEN score = -109.0203 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- K19C-K26C 0.470414373863143 K19E-K26E 0.467883011663053 K19D-K26D 0.461088107343959 K19F-K26F 0.457884779284407 K19G-K26G 0.456652278027957 K19A-K26A 0.452727327049169 K19B-K26B 0.450590460051294 I42B-K47B 0.426873595212607 I42E-K47E 0.41886934650493 I42F-K47F 0.417944897797511 I42C-K47C 0.417688392404605 I42G-K47G 0.414808567167423 I42D-K47D 0.411116257351391 I42A-K47A 0.381998339864709 L41E-Y46E 0.381108949299754 L41B-Y46B 0.372991685330875 L41G-Y46G 0.367152468078516 L41C-Y46C 0.367102999769404 L41D-Y46D 0.363204770026916 L41A-Y46A 0.360357457874742 L41F-Y46F 0.358473609185169 Y46B-K51B 0.344133354339664 D23C-L28C 0.336508302556578 L21F-K26F 0.335322367172863 L21D-K26D 0.327652355576846 L21B-K26B 0.327357490428321 D23A-L28A 0.325696019264946 L21A-K26A 0.325665438447535 L21G-K26G 0.321262953565514 K16A-L21A 0.317567954714604 K16C-L21C 0.31648947626961 L21E-K26E 0.313162976303596 D23G-L28G 0.311855244620355 K16B-L21B 0.311631167123603 D23F-L28F 0.307991547630957 D23D-L28D 0.305694201945036 K16D-L21D 0.303831045097551 K16E-L21E 0.302953600804572 D23E-L28E 0.298989166894249 R44B-K51B 0.296766982566574 D23B-L28B 0.296169283999858 K16G-L21G 0.294909643742789 L21C-K26C 0.294725689794757 K16F-L21F 0.287865227342738 A17F-K26C 0.287036999985092 A17A-K26D 0.277262418412973 A17C-K26G 0.256796628151153 R44B-Y49B 0.222129040982681 A17G-K26B 0.201510642514368 D23A-K26D 0.194310782155603 K26F-A17E 0.192978779370907 L22F-K16E 0.184439436247702 L22E-K16D 0.183747279100487 D23G-K26B 0.183686454845338 K16G-L22B 0.180415166040878 L22A-K16B 0.178182219771386 F20G-K26B 0.176251430675603 K26F-D23E 0.175408706951626 F20F-K26C 0.174869350333408 K26F-F20E 0.174852438857613 F20C-K26G 0.174380756227284 F20A-K26D 0.173547466177097 K16A-L22D 0.173344164275361 K16C-L22G 0.172366003862982 L28D-K36D 0.171311167501782 L28F-K36F 0.171138116599516 L28C-K36C 0.169953527039992 K26G-A31G 0.169125101086628 L28E-K36E 0.168704153628924 L28A-K36A 0.168702951027183 L28G-K36G 0.16796537828214 L28B-K36B 0.16790550582176 K16F-L22C 0.167650922228079 D23A-K16B 0.166440067476991 K36A-R44A 0.164727520663234 K26E-F20D 0.163599372235692 K26A-F20B 0.158614149132371 K26B-A31B 0.156666854212123 K26E-D23D 0.156587904524458 D23F-K16E 0.155939402794913 K26A-D23B 0.155265040901816 D23E-K16D 0.1542923894293 K36C-R44C 0.153346874751895 K36G-R44G 0.151735283211442 A17F-K19C 0.147861242018802 K26B-G34B 0.146704197992232 K36D-R44D 0.146418085973345 K26G-G34G 0.144978508763422 K36B-R44B 0.144369766958758 K26A-A17B 0.14394671977845 K36F-L41F 0.141213466355563 K26D-G34D 0.140923263361004 K26C-G34C 0.140599534348122 K26F-G34F 0.14050351073712 K16G-D23B 0.139776756462962 K26E-G34E 0.139595076480096 K36D-L41D 0.138548546203381 K36C-L41C 0.138080317857906 K26D-A31D 0.137861577688103 K16C-D23G 0.136959537175403 K36A-L41A 0.136913677864663 K36B-L41B 0.136664415954884 K36G-L41G 0.136300636965347 K26A-G34A 0.136157768568007 K36E-R44E 0.135251660373469 K16A-D23D 0.134359095820772 K36E-L41E 0.134096810923375 K26E-A17D 0.131814025353444 K16F-D23C 0.130126108202135 A17G-K19B 0.128889947377578 K26A-A31A 0.12840003927303 K36F-R44F 0.126203421053169 Y43B-Y49B 0.121557629320088 A38C-Y46C 0.11767653877828 A38G-Y46G 0.116369680192052 A38E-Y46E 0.114355066170323 A17C-L25G 0.114328893516408 A38B-Y46B 0.114029771161243 A38D-Y46D 0.11386689954505 K26C-A31C 0.113448551768993 A38A-Y46A 0.112115942202114 A38F-Y46F 0.111643431414524 A17A-L25D 0.110590213571741 I42B-S50B 0.110468614156557 A17F-L25C 0.108881597918193 K26F-A31F 0.102948070221728 L21C-I30G 0.0938017842234385 L21F-I30C 0.0938017842234385 L21A-I30D 0.0938017842234385 K26E-A31E 0.09295704757427 I30F-L21E 0.0912223804112933 K19A-I27A 0.0886929138139148 V18A-A17B 0.0874828614098648 K16F-F20C 0.0864796140261124 K16G-F20B 0.0864796140261124 L21G-I30B 0.0857169517911111 K19B-I27B 0.0854636550528038 I30E-V24D 0.0853568267414868 I30A-L21B 0.0850498767169382 K19C-I27C 0.0817522248298062 K19G-I27G 0.080204140332726 I30E-L21D 0.0793358884627042 K19F-I27F 0.0783617049771923 K19D-I27D 0.0779617196961868 K19E-I27E 0.0776921890544617 A17A-K19D 0.0768208081789972 I30A-V24B 0.07401887677121 A17G-L25B 0.0716881877198574 K16A-F20D 0.0691901905493157 K19F-V24F 0.068858762988468 A38C-Y43C 0.0637072406706096 V24G-I30B 0.0630927371603809 A17C-K19G 0.0600105986028332 L22A-F32A 0.0589273217580271 V18E-A17D 0.0586747208272129 L22B-F32B 0.0585480065954682 K16C-F20G 0.0580598262504095 V18F-A17E 0.0576417806005365 G34A-I42A 0.0572768743384316 L22D-F32D 0.0568548567578739 K19G-V24G 0.0568331120624572 G34C-I42C 0.0564245946698178 L22G-F32G 0.0563387992247151 L22C-F32C 0.056040293225295 L22E-F32E 0.0552185333587376 K19C-V24C 0.054225635202374 K19E-V24E 0.0534209094353129 D23G-F32G 0.053379981022935 G34E-I42E 0.0531477198823795 D23C-F32C 0.0531185039997801 G34D-I42D 0.0530288140599413 D23B-F32B 0.0525419574262518 G34G-I42G 0.0519469938338197 D23A-F32A 0.0516751510973577 L22A-A17B 0.0515372227231539 K19A-L25A 0.0510284949494619 K16G-V24G 0.050542505020456 K19D-V24D 0.0504154847215394 L25B-G34B 0.0500038951795716 K16F-V24F 0.0499981080771346 G34F-I42F 0.0481033354976503 L22F-F32F 0.047928938106768 K16C-V24C 0.0473650618195904 K16D-V24D 0.0473122186534831 K16E-V24E 0.0467424393682438 D23E-F32E 0.0467029077102556 K19G-L25G 0.0464638648761917 L22E-A17D 0.046137085977378 D23F-F32F 0.0461324988194174 L25A-F20B 0.0461280744077461 K16B-V24B 0.0459823793473944 L25F-A17E 0.0458741769301856 L25F-G34F 0.0453749637914995 L25G-G34G 0.0448867187553093 K16A-V24A 0.0445519639148093 L25D-G34D 0.0442199975306732 G34B-I42B 0.0440456523819313 D23D-F32D 0.0434431085899463 A38E-Y43E 0.0429593561760573 L21F-I30F 0.0428199797519522 I29B-G34B 0.0415747956827559 K19B-L25B 0.0411981705011644 L25E-G34E 0.0404212053132675 L25C-G34C 0.0396269568305676 F20E-K16D 0.0386258463796381 L22F-A17E 0.0383615568042659 L25A-G34A 0.037104254681531 A31E-D39E 0.0368760523526941 I30F-V24E 0.036759369879853 K19A-V24A 0.0365677112025171 K19E-A17D 0.036465849132993 A31C-D39C 0.0355305023729313 V18C-K26C 0.0347326588859344 V18G-K26G 0.0336562379164259 V18E-K26E 0.033627191722112 V18F-K26F 0.0336063340582186 V18D-K26D 0.0332067404027685 V18A-K26A 0.033194499858416 V18B-K26B 0.0331471273508143 I29G-G34G 0.0325044782412505 K19C-L25C 0.0321061191461958 K19B-V24B 0.0306854290649383 A31A-D39A 0.0298659529968006 F20D-L28D 0.0292994392576895 F20E-L28E 0.0292578439188804 F20G-L28G 0.0290000248437636 L21E-I30E 0.0287379116252247 K19F-L25F 0.0286836747708756 L21D-I30D 0.0282309866360446 K36A-Y46A 0.0281490646755778 K19E-L25E 0.0280403422775954 L21A-I30A 0.0278948214800092 F20B-L28B 0.0278011037170212 F20F-L28F 0.0276130305305931 A31F-D39F 0.0272245663461099 K19D-L25D 0.026853797752314 L21G-I30G 0.0268086607592863 F20F-L22C 0.0255356871665557 K36C-Y46C 0.0254688088578758 K36B-Y46B 0.0254393206670391 F40C-L48C 0.0252314970673748 A38G-Y43G 0.0250730543424567 F40E-L48E 0.0250456698641992 F37A-K47A 0.0249125749289174 F40G-L48G 0.0243538943249453 F40A-L48A 0.0242102665257988 F40D-L48D 0.0236442237606902 G34A-D39A 0.0230973715702332 L21B-I30B 0.0227581795433025 F40B-L48B 0.0225329138069714 K36D-Y46D 0.0224577384557607 F20A-L28A 0.0223958245797389 K36G-Y46G 0.022382485983325 F20C-L28C 0.0223121991842909 A17F-D23C 0.021093870222765 A31D-D39D 0.0208799217338642 L41E-K47E 0.0207760883850545 F20C-L22G 0.0206282049040776 F40F-L48F 0.0205699751600579 G34E-D39E 0.0205398529679535 K19F-A17E 0.0189736639075813 L41D-K47D 0.0182127129869345 L41B-K47B 0.0181370338299462 G34C-D39C 0.0180887966361918 A31B-D39B 0.0171396460446163 L41C-K47C 0.0171291832378184 L41G-K47G 0.0165819201398199 L21C-I30C 0.0164904529427119 V24A-I30D 0.0162710659938765 A17A-D23D 0.0159655464964867 V24C-I30G 0.0157360099674553 V24F-I30C 0.0156717821609424 K36F-Y46F 0.0153524609452136 K36E-Y46E 0.0153336778415323 A17A-V18D 0.0149522119969738 A38D-Y43D 0.0148104698421214 F20A-L22D 0.0146639860858775 A31G-D39G 0.0132075035482337 A17G-L22B 0.012964193955276 K26A-V24B 0.0129220956889862 F37B-K47B 0.0128786843074913 D23D-I30D 0.0125771823503964 A38C-K47C 0.012544789706757 L41F-K47F 0.0124485860619963 A17G-D23B 0.0110610111162377 A17C-V18G 0.0103377403577927 A17C-D23G 0.0101348626760001 K26E-V24D 0.0093529461747357 D23A-I30A 0.00889206045686253 G34D-D39D 0.00828711194731913 F37E-K47E 0.00719992390861179 D23E-I30E 0.00718502881373162 D23G-I30G 0.00709789576484088 I30F-A38F 0.0068668623767949 D23B-I30B 0.00640865094865495 I30A-A38A 0.00611617440868462 D23F-I30F 0.00605960041776576 I30B-A38B 0.00590965560626033 I30E-A38E 0.00571835161325618 I30G-A38G 0.00523239995801639 I30D-A38D 0.00491390916978718 G34F-D39F 0.0043316423559312 A17G-V18B 0.00402021126563845 D23C-I30C 0.00400180609724465 I29F-G34F 0.0036667301307407 F20G-L22B 0.00343155122897132 A38G-K47G 0.00318172116409343 I30C-A38C 0.00226282121331778 D23G-A31G 0.000363164812847039 V18G-I27G -5.67569966136716e-05 K19A-A17B -0.000145540079890871 F20F-K16E -0.000720381377593782 A17C-L22G -0.00149119781917673 A38B-Y43B -0.00171198474161294 V18C-I27C -0.00228991721294669 A38E-K47E -0.00322294281053015 F37F-K47F -0.00323949789760114 D23B-A31B -0.00353139772524358 F37D-K47D -0.004268831636697 A38B-K47B -0.00436500474635881 D23F-A17E -0.00439394323462672 A17A-L22D -0.00455114117856859 F32G-D39G -0.00565783955562527 F32B-D39B -0.00595763712716924 V18F-I27F -0.00654578324880362 G34G-D39G -0.00669127342995601 I29D-G34D -0.00689923576537055 L41A-K47A -0.00784475388753592 V18E-I27E -0.00786696554246191 A17G-V24G -0.00835524842641799 F37C-K47C -0.00840202116812527 I29E-G34E -0.00894081408837621 F37G-K47G -0.00909093838969177 D23E-A17D -0.00910217456837437 A17F-V24F -0.0103024855874869 A38D-K47D -0.0107661551940144 D23F-A31F -0.0133642095753728 D23A-A17B -0.0134071608508499 A38F-Y43F -0.0134807372984689 D23D-A31D -0.0138498388259296 D23A-A31A -0.0140520731890952 V18D-I27D -0.01485929150323 G34B-D39B -0.0152160572165818 K16A-L22A -0.015973420032747 V18B-I27B -0.016270800772114 D23C-A31C -0.0165004403481577 A38F-K47F -0.0180089260684246 A17F-V18C -0.0182298429424961 F32A-D39A -0.0187264080054295 K16F-L22F -0.0201813858477982 F20A-I27D -0.0202460798751192 K16B-L22B -0.0202696649874534 D23E-A31E -0.0205533225107639 D39A-K47A -0.0214114442369207 K26F-V24E -0.0216214351512898 F37C-Y46C -0.0226446633014845 L22F-F20E -0.0232039921810481 F37A-Y46A -0.023968265372039 F32F-D39F -0.0243945915804957 I27F-K36F -0.0246145543497733 K16G-L22G -0.0247413061920323 I27E-K36E -0.0248089558871429 F37G-Y46G -0.0248641379876835 F37D-Y46D -0.0255416499409229 F37F-Y46F -0.0260659378097978 A17B-V24B -0.0262281350527545 K16C-L22C -0.026411741377518 I27C-K36C -0.0267902822014681 D39D-K47D -0.0271153419425558 V18A-I27A -0.0275461329770845 I27D-K36D -0.0279229587078924 I27B-K36B -0.0284037969773712 A17C-V24C -0.0288439642322267 F32D-D39D -0.0291945927458679 D39C-K47C -0.0294157609951742 D39F-K47F -0.0294501412306163 A17E-V24E -0.0296131767516208 F37E-Y46E -0.0296426384941748 F20C-I27G -0.0296838756040243 A38A-Y43A -0.0297247410750181 D39E-K47E -0.0297698275807767 I27G-K36G -0.0299449795735862 I27A-K36A -0.0300569768808554 F37B-Y46B -0.0309294509415703 L25E-A17D -0.0311300393590379 D39B-K47B -0.0317729575058756 F32C-D39C -0.0328282174748429 K16E-L22E -0.0329699022758376 A17D-V24D -0.033669715558398 F32E-D39E -0.0337012557749325 F20A-K26A -0.0338913486634009 A17F-L22C -0.0347577131832724 I30A-D39A -0.0347722453402232 I30C-D39C -0.0347928949683995 V24E-F32E -0.0348988669020138 F20F-I27C -0.0352157211061908 I30E-D39E -0.0353494050619663 G34E-Y43E -0.0355539343147959 I30D-D39D -0.0355948203788744 D39G-K47G -0.0356600667310349 I30B-D39B -0.0358459254090278 I30G-D39G -0.0359548350955284 I30F-D39F -0.0359606658211785 F20B-K26B -0.0360287420516059 I29C-G34C -0.0361824864149636 F40B-S50B -0.0363951693144595 A38A-K47A -0.0370758541087355 K16D-L22D 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