[Wed Aug 24 17:46:01 2016] >Input file: TM3TT1CGD.pdb >TM segments: A16-28_A36-54_A87-122_A157-170_A192-207_A234-252_A274-289_A326-351_A372-385_A393-412_A441-456_A477-490 MAIDEN score = -77.1560 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- BBeads pair Empirical energy ----------- ---------------- K117A-L122A 10 E278A-I283A 1.29657789395362 P97A-I350A 1.14691702432975 W95A-F485A 1.13026222939806 F396A-I401A 1.04129511976455 V100A-D395A 0.985353210893963 V105A-F163A 0.984762850834551 V201A-I288A 0.979941391208284 V91A-F485A 0.978137065955183 E108A-L339A 0.967057906687815 Y106A-F163A 0.961583470017384 W95A-A398A 0.884343382723739 L49A-I446A 0.856838430604143 W110A-A159A 0.842895011965135 Y43A-V239A 0.840661374651266 L196A-W335A 0.837385970517859 Y103A-V384A 0.833521229644774 L98A-I350A 0.81009595039921 Y441A-I446A 0.796237501064174 I96A-F250A 0.790388601254683 Q241A-L246A 0.771420898287211 L408A-P448A 0.753268576741351 F47A-I52A 0.748703850359707 V404A-L451A 0.743418528465723 F114A-F336A 0.736487070272044 V91A-L488A 0.734590327767083 V99A-D395A 0.73205383372078 F118A-F330A 0.731972800917621 N170A-I348A 0.721976363631503 V19A-T245A 0.715094994244271 L196A-L334A 0.714229708600188 F250A-V403A 0.712793423160678 V204A-I288A 0.704518359566688 F24A-G285A 0.687439999254594 L193A-L338A 0.686010718774224 G113A-V162A 0.682905164073224 V19A-G343A 0.680230786156512 L21A-L339A 0.671185767236117 L248A-V403A 0.665506852393779 F47A-I242A 0.664759431478843 F39A-V234A 0.66032276861468 N23A-V282A 0.65688136592882 A115A-F337A 0.655155388736154 V19A-T345A 0.653473025090914 T111A-F337A 0.649367001749754 N17A-A342A 0.646174193104349 I102A-F378A 0.630980878131365 F396A-G402A 0.625922458104358 I102A-A381A 0.625911578930609 G249A-F405A 0.625750807071271 F27A-G285A 0.6216000797987 F24A-G286A 0.618230793033948 G51A-I242A 0.617650597532547 G51A-F243A 0.617352036185165 L411A-R444A 0.611920883842362 A101A-M351A 0.611526672046685 W110A-A115A 0.610508780102131 A18A-F244A 0.609899046974346 G16A-S346A 0.606976057337141 S109A-F163A 0.603707749753329 V105A-T166A 0.585165568185906 E108A-F340A 0.580763498076289 F118A-F333A 0.579070652132735 Y43A-I242A 0.576331696587628 P97A-F250A 0.572224789038026 E393A-A398A 0.569616516656101 L98A-M351A 0.569159915057723 F27A-G286A 0.567568430804558 L112A-F336A 0.564109899071253 T111A-F340A 0.56385540744623 F27A-E281A 0.558240212529551 A115A-W335A 0.557691076250886 W110A-V162A 0.553180097269423 L112A-K117A 0.552955201202202 F114A-F333A 0.55033409878633 W95A-F250A 0.541255111309376 F243A-L248A 0.540051324664926 L49A-V442A 0.535650923021114 F39A-A238A 0.534356900532555 I165A-N170A 0.533021445773142 F405A-L451A 0.529837544931302 L200A-I288A 0.528558660200273 M167A-A374A 0.526458348587141 L94A-F250A 0.523903043781938 L193A-F341A 0.521758907187852 V19A-A280A 0.516825707689464 F24A-S289A 0.516529406712154 P28A-G286A 0.515365776896466 N23A-L284A 0.515349353075004 F24A-L284A 0.506338517237162 F24A-E281A 0.500534016881281 D395A-I401A 0.494717045035539 L112A-F337A 0.490790332810739 V198A-R203A 0.490572087111447 N17A-L246A 0.483838178364299 L119A-F330A 0.48373189211047 L48A-P53A 0.482428155303791 F337A-A342A 0.478758471219429 E108A-L344A 0.477703079519499 L408A-L451A 0.476772837107394 M40A-I45A 0.472701866660859 F92A-F250A 0.470412076516229 V282A-S287A 0.469371404592925 V204A-S287A 0.465372625467218 I242A-S247A 0.464805648873391 L200A-S287A 0.463506767185055 L119A-F333A 0.463334781417726 I236A-L454A 0.458778610494426 V99A-A398A 0.457824162472482 G20A-T245A 0.446428967827876 M351A-T373A 0.446189713602695 V105A-S347A 0.444765261169974 V100A-A398A 0.435046166879425 I96A-G402A 0.434738354779092 F104A-S347A 0.427462524542508 L112A-F340A 0.427239694204207 V100A-G399A 0.422292605303138 V50A-V239A 0.419597034693544 F24A-I288A 0.418424889754691 K117A-F333A 0.418203747143174 V19A-S346A 0.413979022734738 I412A-M443A 0.411549753603937 W95A-V100A 0.408460178198586 G251A-I350A 0.405994739377784 V19A-L246A 0.405856224875618 L25A-S289A 0.404965421728074 I102A-V377A 0.400384489690576 I102A-S380A 0.399953267729659 L98A-V377A 0.399543339169661 R478A-G483A 0.397195714446285 I96A-A398A 0.394892460921024 W95A-L484A 0.392935441329504 I96A-G399A 0.392038656400582 A101A-V377A 0.388223348269038 W110A-F336A 0.38593981259312 V404A-L455A 0.382114295609426 V99A-W397A 0.381844540524676 W110A-M385A 0.381048066658859 S109A-T166A 0.380924786302835 E108A-G343A 0.378383071784096 A342A-A349A 0.377092438609728 L196A-L338A 0.376075296616757 A252A-I350A 0.373359281836936 E410A-T447A 0.371832969492976 V404A-L454A 0.370269525659499 A18A-L246A 0.369369543905181 V91A-T489A 0.36932271284977 A197A-A342A 0.366961871939379 I116A-F333A 0.363044511982813 A279A-L284A 0.358634757627779 L411A-P448A 0.357393638450038 L200A-F205A 0.356562654381982 P28A-Q241A 0.356436525602564 P97A-A398A 0.356365547113606 L21A-A342A 0.35627296622043 L411A-M443A 0.356117112599752 A101A-S347A 0.354034185615366 A115A-L334A 0.348140104223459 S247A-A252A 0.347096396389838 Y43A-Q241A 0.347041581713642 Y106A-A381A 0.346975337670013 P28A-P42A 0.345660405623329 A115A-F336A 0.345108092842654 L49A-M443A 0.344941612244548 I102A-F379A 0.344368999969678 G20A-E108A 0.341926725516448 F243A-E278A 0.338517145040902 F194A-E278A 0.338334628476857 W372A-V377A 0.335791098429143 W397A-V403A 0.333098236902581 Y103A-V162A 0.331023426271179 P53A-E410A 0.329884862074638 F114A-L119A 0.329605702567587 F92A-F406A 0.328492553195692 T245A-T345A 0.328428630495403 G36A-A237A 0.327497140644724 L157A-V162A 0.324911210733358 M394A-G399A 0.324834717196029 S109A-A159A 0.323408198067221 A197A-S289A 0.322570984174807 Y103A-D395A 0.320005907748425 I482A-F487A 0.318190083003154 P53A-S247A 0.317129685547703 L119A-T329A 0.314567714817559 G240A-G407A 0.312352417615184 G22A-T245A 0.311045377977684 G20A-G286A 0.310755483339938 I102A-M394A 0.308370884349053 S347A-A374A 0.307597138510429 A101A-A375A 0.307276696913804 L246A-A274A 0.30643663491666 F250A-I350A 0.304654611667319 P42A-V239A 0.303683729376122 I102A-V384A 0.302644549231334 V50A-I242A 0.302272985680537 G20A-L339A 0.301815409926883 G240A-G402A 0.3004786061883 I45A-V50A 0.299412114794916 L21A-E281A 0.297568658769003 P28A-Y43A 0.29687491444502 E281A-G286A 0.29634460780289 G22A-S247A 0.295748544395637 I96A-A101A 0.295374978477842 N23A-P28A 0.294976972083621 I88A-T489A 0.294685135780283 G20A-S347A 0.293313086740158 F250A-F406A 0.293201381949191 V100A-I350A 0.292134714734941 P53A-T409A 0.292096018085816 S247A-G402A 0.29050126942937 A18A-T245A 0.288757020746401 I401A-F406A 0.288194445196988 T111A-L339A 0.286905617120718 L200A-G328A 0.28621229815342 L196A-V201A 0.284197027939854 F333A-L338A 0.28213877291431 L193A-G343A 0.281686571749619 V198A-L284A 0.280416839809385 Y160A-V377A 0.280358659254514 F118A-G332A 0.280012822933649 G249A-A349A 0.279554285635943 W95A-T373A 0.278198237912769 A197A-L338A 0.277801171527072 V404A-M443A 0.277702787295771 G20A-A197A 0.277416204536841 L122A-G332A 0.27682403490037 A197A-L284A 0.274920150028261 G407A-L455A 0.27398974849922 L248A-V404A 0.273864041125052 V100A-V105A 0.272943950174991 L112A-V162A 0.270727103744859 G251A-S346A 0.26765058126924 G407A-Y445A 0.267001240443184 E108A-F168A 0.266256614166547 N17A-P97A 0.266133688495308 I41A-A46A 0.264967913013495 G16A-N23A 0.264815199537601 V105A-V377A 0.264194631121525 S109A-I165A 0.263659038311747 L248A-G407A 0.261709139852408 L451A-V456A 0.261147176688079 G249A-W397A 0.260622536390184 N23A-G343A 0.259594276535553 G16A-L339A 0.257958958096536 R26A-A238A 0.257656256438576 I376A-A381A 0.255775431367772 Q241A-E278A 0.255688782611011 V201A-L284A 0.255580298696942 G407A-L454A 0.255273661558726 G90A-F405A 0.255081687822187 N170A-L344A 0.25507937365799 A326A-G332A 0.254521849641761 S109A-L339A 0.253679678350543 Y103A-A381A 0.252919736043195 M443A-P448A 0.252706314343012 K117A-W335A 0.251651511432036 L25A-G285A 0.250794195438883 P42A-W235A 0.250671073466639 G327A-L334A 0.250151579774674 S109A-F340A 0.249648689739454 P97A-W397A 0.246918980824547 G402A-L451A 0.246743775268315 A18A-S346A 0.246628905080247 T111A-T345A 0.244630760739235 N277A-G286A 0.244528950167787 G22A-A279A 0.243524528967025 P97A-L248A 0.242123865446058 L54A-G251A 0.241812071417978 L193A-T345A 0.241637785021396 G51A-L451A 0.241039763912416 W335A-F340A 0.241034528994893 S109A-A342A 0.241022165921359 I116A-G121A 0.240468612057607 L21A-T345A 0.239940189755692 T477A-I482A 0.238490735896659 G36A-A238A 0.238252750077015 F243A-G402A 0.238223269795538 P53A-L246A 0.238180578044366 W110A-M167A 0.238038995251291 F24A-Q241A 0.236246381199339 Y441A-A449A 0.235676891210307 V50A-F243A 0.234895965300502 L119A-G327A 0.234834772321109 V105A-D395A 0.234675640027071 Y441A-F450A 0.233676166888557 I96A-G249A 0.233566378394566 F104A-A349A 0.233512105339796 Q241A-E281A 0.23346422167698 L193A-A342A 0.233459898685567 E108A-F158A 0.233363996454494 F243A-A274A 0.23252919129821 L25A-T245A 0.232371898095471 P42A-V234A 0.231611319035669 L25A-E281A 0.23072553630527 I242A-V404A 0.230317600927717 G93A-E410A 0.23031490831289 E108A-V162A 0.229540386357708 V91A-I482A 0.22861382882547 A398A-R478A 0.228504203635512 E108A-H382A 0.227411598241664 P53A-L248A 0.227366336815804 F163A-F168A 0.224933804884267 Y103A-E108A 0.22365520315782 L408A-A452A 0.223312885327839 F104A-E393A 0.222661976712138 V100A-V377A 0.222402136307055 T166A-T373A 0.222326455705905 R26A-N277A 0.221124268059797 V234A-V239A 0.220488781938592 G16A-A342A 0.220101684609762 G285A-W335A 0.218879252491618 P53A-M443A 0.218773021772066 G407A-A449A 0.218345692505157 G51A-L246A 0.218032269191095 F163A-A374A 0.217837281654663 Y103A-A398A 0.217771857943625 P28A-T245A 0.216523156672492 L94A-G251A 0.216152632933419 L284A-S289A 0.215467455743537 M385A-D395A 0.213534289543107 A38A-A237A 0.212355166304013 G251A-I348A 0.211897523495564 V204A-G328A 0.211299642596282 V50A-S247A 0.210954008902688 F104A-G399A 0.210560861960637 I45A-G240A 0.209983436350444 N23A-G240A 0.209087209009042 F406A-L411A 0.208765578547586 G249A-L411A 0.208450296147316 F405A-V456A 0.208213763848587 V282A-S289A 0.208038190765516 L21A-R26A 0.207811229942839 V99A-L484A 0.20779778745575 T245A-G285A 0.206657230493692 P97A-T345A 0.206283632282954 L49A-V239A 0.205596631614717 V99A-F379A 0.205434464275998 V19A-N277A 0.205187138394486 I96A-T373A 0.204658566216646 Y43A-L48A 0.204374804159375 V91A-L486A 0.204035755111775 T245A-G343A 0.203338142552852 F24A-A279A 0.202361137444571 G51A-N277A 0.202145583578466 V100A-Y480A 0.201992012269453 I169A-G343A 0.201736427121098 T111A-T329A 0.201639930038006 W235A-G240A 0.201548499197862 L164A-M385A 0.201328188210081 G36A-V282A 0.200324387220586 R26A-Q241A 0.199930776256798 I96A-M394A 0.199484501489907 V91A-G249A 0.199425084447961 V19A-G285A 0.199410130454059 G249A-P448A 0.198614410976028 V99A-R478A 0.198256248523188 N17A-L193A 0.197704525788045 V403A-L408A 0.197692287672128 G113A-W335A 0.197370179955775 V99A-G483A 0.197215286650223 E281A-A342A 0.19702501782057 F114A-Y160A 0.196297143868213 I116A-L122A 0.196124312143006 G93A-V100A 0.195513654156155 G240A-T447A 0.195244695914141 V105A-M167A 0.194489572498739 P97A-G483A 0.194135297433813 P97A-S380A 0.193627084704593 D395A-T400A 0.193418395291181 I401A-L455A 0.193223163019335 P28A-E278A 0.192964581166182 L89A-E410A 0.192806053972562 G22A-S289A 0.192283333295422 E108A-A381A 0.191925804314825 F244A-E281A 0.190995728669177 T111A-I116A 0.190965435970806 I88A-G93A 0.189877024535205 I44A-G51A 0.189601250894536 N23A-Q241A 0.188740783390966 A237A-T400A 0.188687872630816 I44A-T447A 0.188228720003072 G249A-I401A 0.188207104460222 V99A-M394A 0.187625020140336 G240A-L455A 0.187168748364572 V204A-G286A 0.187146560623182 G402A-L454A 0.186450821853368 G20A-F337A 0.186157199231169 Y43A-F450A 0.185930707562624 I45A-V234A 0.185911965240642 Y106A-N170A 0.185807191813617 A46A-Q241A 0.1844937002746 I350A-V377A 0.184165620743627 P97A-L484A 0.183974209370567 V50A-T447A 0.183540991998946 T111A-F336A 0.182292275904762 G93A-L484A 0.18228236004944 F104A-T111A 0.181860362123894 T111A-L344A 0.181859228273522 E393A-G402A 0.181333430605257 N17A-F104A 0.180348644174797 V100A-M394A 0.179255721103161 T409A-I446A 0.179118653938181 G93A-L486A 0.179054499942674 G22A-L276A 0.178638025351483 G20A-A279A 0.178163741012132 F92A-G399A 0.177810915041123 G251A-L408A 0.177687205745285 L21A-S347A 0.177663595579405 N17A-I348A 0.177519899419467 L49A-G407A 0.177335569084028 G240A-P448A 0.17699926832661 N17A-G249A 0.176401272579413 Y106A-M394A 0.17616567284509 G93A-L408A 0.176035397375944 G113A-L334A 0.175756161428062 L206A-S289A 0.175368838323584 F24A-T245A 0.175142461044201 T166A-A375A 0.1747354374057 F194A-F199A 0.174106155296515 N23A-F336A 0.174073802653775 G22A-L338A 0.173858955222341 I236A-T447A 0.173309518543864 F104A-T345A 0.172967781184163 E108A-T345A 0.172735192574716 F168A-A375A 0.172122471199324 F199A-G285A 0.172067664676794 T192A-W335A 0.171998360970669 A280A-G285A 0.171060659409148 G240A-V453A 0.170549457091422 I102A-A398A 0.170485240657937 R26A-A280A 0.170393703792736 V99A-G402A 0.170256297563245 L94A-M394A 0.169598894815064 V120A-G332A 0.168848048639547 I41A-A237A 0.168203461459056 G249A-V403A 0.168035907456285 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