[Wed Aug 24 17:47:58 2016] >Input file: TM3TT3CGD.pdb >TM segments: A13-26_A30-45_A88-118_A154-166_A192-206_A230-246_A276-291_A308-342_A373-386_A388-408_A444-458_A473-487 MAIDEN score = -61.1582 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- BBeads pair Empirical energy ----------- ---------------- K111A-L116A 10 E277A-I282A 1.24653574744468 F112A-F332A 1.03772200453709 Y100A-F162A 1.00920192545728 V94A-D394A 0.989963903503544 W89A-F484A 0.929525907818443 P118A-A319A 0.925025716952354 F242A-V402A 0.913005216141475 F112A-V117A 0.912227776443446 R20A-A309A 0.900151169307943 V23A-F310A 0.888212101048917 A109A-W334A 0.884527512100009 E102A-L338A 0.863867220708865 W104A-A158A 0.863074512024359 L43A-T446A 0.851384466201322 W89A-A397A 0.848118335377795 F33A-V233A 0.814911209564031 W234A-L453A 0.80806103590503 F33A-W234A 0.807720168055466 Q240A-L245A 0.806545760650142 V200A-I287A 0.805480036897086 W89A-L483A 0.800453169540063 Y97A-V383A 0.794650968990517 H381A-L386A 0.772566062988855 F395A-I400A 0.754520940607545 L19A-F310A 0.733790533902779 I96A-V376A 0.733104147659549 F112A-F329A 0.732076865815114 F321A-T328A 0.729751341117332 V93A-D394A 0.718461041129641 E392A-V473A 0.711450751408532 V238A-T399A 0.708335315012744 L19A-L312A 0.704854120424616 V200A-L283A 0.704539697303879 V44A-T446A 0.704074719522804 F108A-F335A 0.703904313694116 L106A-F335A 0.695732966391655 V383A-K388A 0.695637465713868 V383A-L390A 0.693139847418898 A25A-F33A 0.682491701771255 L199A-I287A 0.681174801210885 A109A-L333A 0.675970269623775 A309A-L390A 0.66784986768308 G107A-V161A 0.666647115133774 F33A-A237A 0.665040525096731 G239A-I400A 0.664812417348532 I110A-F332A 0.663202466832209 F321A-G327A 0.64589014833198 V203A-I287A 0.638851726542365 Y97A-L390A 0.636883941931842 E392A-A397A 0.628839936997133 G239A-V403A 0.624126821025906 F21A-G285A 0.623876688907223 F18A-G313A 0.62320411259162 F242A-G398A 0.623034792157602 F21A-G284A 0.622660967017785 L192A-W334A 0.620882791087364 F321A-G326A 0.618725515200438 A109A-F336A 0.616722341194666 K111A-V117A 0.615352789455654 I90A-W396A 0.606446038514516 F321A-G331A 0.604071261563831 G45A-F242A 0.6004451118923 S103A-F162A 0.598115016976756 G45A-I241A 0.594297917445795 I96A-F377A 0.579073763468094 P22A-G285A 0.575097561182226 T105A-F339A 0.571333693101135 G16A-F243A 0.567499329409459 W104A-A109A 0.566611922574412 V197A-R202A 0.561663309970188 F108A-F332A 0.55665782369957 S288A-L312A 0.555669742174151 I241A-S246A 0.548513655221427 F18A-G285A 0.538672178851876 T105A-F336A 0.532397837103893 P231A-L453A 0.529468651717898 V203A-A291A 0.524103049748758 P22A-L312A 0.522005289763547 W104A-V161A 0.520458169398107 V23A-A309A 0.519180779291099 V94A-A397A 0.517141912517983 V452A-W457A 0.511954580505626 A95A-V376A 0.510519616114924 F321A-L330A 0.501823338056708 V23A-G308A 0.501473690221699 M34A-I39A 0.500796652246793 N17A-A279A 0.500791098246379 F329A-W334A 0.500453590898509 S322A-G327A 0.480398927047405 I110A-L116A 0.478653890260195 A309A-D394A 0.477449786437272 S288A-L317A 0.471016819437917 W334A-F339A 0.457650523437772 L43A-I445A 0.457611993174667 P22A-I289A 0.455903905212018 V99A-F162A 0.454004523607626 S103A-A158A 0.45172421730459 I320A-G327A 0.451698079225724 I39A-V44A 0.451144290600494 L407A-P447A 0.447799231003192 F395A-G401A 0.447680433363889 L106A-K111A 0.447180776750359 L317A-S322A 0.446993381497452 Q240A-T399A 0.441615801298576 I90A-G398A 0.440242356629692 F336A-A341A 0.439354002815598 W89A-V94A 0.431478594678107 V203A-S286A 0.425252150390403 L199A-S286A 0.424219850222443 L106A-F336A 0.423160494269113 R202A-I320A 0.422501331817982 L113A-F332A 0.422117202064295 S288A-G313A 0.421125185456541 F21A-A26A 0.419629149728246 V99A-T165A 0.418321160262219 V238A-V402A 0.413118667662784 L113A-F329A 0.410026332323701 A32A-V233A 0.408810365056235 Y100A-A380A 0.408097906151266 I235A-I400A 0.406774286526522 L106A-F339A 0.400093021113292 W104A-M166A 0.399351344235737 P91A-A397A 0.397690516006265 S389A-T476A 0.396894733189258 Y98A-S103A 0.396808076635355 S103A-T165A 0.394608910141821 F243A-G398A 0.394483911153588 W396A-V402A 0.394105128194607 V13A-A279A 0.391295276360679 K388A-M393A 0.390200046232974 K388A-V473A 0.389494175235683 Y37A-I241A 0.38855176788075 A40A-A237A 0.387805286560521 E102A-F339A 0.386263866040324 K111A-F332A 0.384042781903283 F108A-G331A 0.382523919577467 I90A-A397A 0.380136880561842 Y37A-W234A 0.376732476057807 L453A-A458A 0.375934921416654 A95A-A374A 0.375753473624358 L156A-V161A 0.375218815923318 V13A-N276A 0.373416609694804 P22A-N311A 0.373096860203179 A236A-A397A 0.370995376238004 M393A-I480A 0.370515037857611 I90A-M393A 0.369819547680202 L88A-V93A 0.369117848848325 E280A-G285A 0.369071200477119 L192A-V197A 0.367289770031419 L92A-V376A 0.366496861047737 G14A-T244A 0.364980182245047 L15A-A341A 0.364419513407572 A196A-L283A 0.35981604301361 N17A-L283A 0.359373464854525 I90A-G401A 0.351561400260421 N17A-V281A 0.34877436021604 Y37A-Q240A 0.348229614104864 D394A-T399A 0.347539572310417 L19A-N311A 0.34640212643948 G45A-E277A 0.344703638681725 A278A-L283A 0.339658706618733 V402A-L407A 0.337406525858841 E102A-F157A 0.336991518472243 F21A-Q240A 0.334130703466842 A397A-V402A 0.328821276060253 K111A-P318A 0.328518996678762 F33A-D230A 0.327511542723315 R20A-L312A 0.327263355821183 P231A-V456A 0.326566394219608 T316A-T324A 0.326181964723532 I481A-F486A 0.325562383214638 V23A-N311A 0.325120505727642 F404A-L450A 0.325114170477713 F18A-E102A 0.324533596515967 F18A-E280A 0.323318897754231 F332A-L337A 0.320063202345784 A196A-S288A 0.319181346830572 S103A-A341A 0.319155803093231 A278A-S286A 0.317259964837393 Q24A-A237A 0.315298874183577 G232A-W457A 0.31338199648634 A109A-G327A 0.311419691395587 G14A-A278A 0.311210885182079 G14A-A196A 0.309865489178921 L192A-L337A 0.308916148236519 R20A-Y97A 0.30768014110272 M34A-A237A 0.30685159765937 F41A-I241A 0.305421789682415 L19A-A309A 0.305140793201227 Y97A-A380A 0.30324051751321 M393A-G398A 0.302376136665369 A109A-G331A 0.300739813842982 E102A-G342A 0.300359102698962 Y97A-G308A 0.30029494459372 S379A-K388A 0.299107203429984 I90A-A95A 0.298712851507972 P22A-T244A 0.29610777205675 A325A-L330A 0.295697117405536 P36A-V238A 0.295566818096461 V233A-V238A 0.294365078610722 G115A-T328A 0.293068759348843 P231A-A236A 0.291867946459659 S246A-G406A 0.291467074699332 G115A-L330A 0.289768071793419 G107A-L333A 0.289397779105431 G31A-G232A 0.289322524463007 Y97A-V161A 0.289164321116088 V383A-D394A 0.288914455462824 P154A-M384A 0.288140423476648 A291A-L317A 0.287988874985653 F112A-G331A 0.287686245730479 V403A-L450A 0.287583593462656 P22A-S288A 0.286675879183484 L407A-L450A 0.285508175443141 M34A-Q240A 0.28477003581701 L450A-V455A 0.283092028648996 Y97A-D394A 0.282428712602532 L245A-N276A 0.280678221785761 Y97A-D391A 0.279391121233473 L192A-G331A 0.279320149656489 G232A-G398A 0.279006884599782 L206A-A291A 0.278363766635093 V99A-D394A 0.277019089928725 Q24A-A236A 0.276533039151357 G284A-L312A 0.276480862903449 A25A-G308A 0.276465762693063 N17A-P22A 0.274365308801555 K111A-P118A 0.27425004269185 P118A-S322A 0.272948761551338 G308A-D394A 0.270837897767873 P22A-Y37A 0.269491991653399 Y98A-D391A 0.268372535166525 V197A-L283A 0.267852111706194 N311A-E392A 0.267612405223759 L245A-E277A 0.265813381561848 Y159A-I164A 0.265801121598714 T399A-W457A 0.265407496050655 T316A-W334A 0.264531926067272 M384A-D394A 0.26401046342257 V23A-L312A 0.26383943661975 N17A-G342A 0.263105905834955 R477A-G482A 0.263012161462469 R20A-A237A 0.261946679431482 E392A-G401A 0.261585319540058 Q240A-E280A 0.261497107934282 G313A-W334A 0.260403786878144 R20A-M393A 0.258537339946526 F108A-L113A 0.25548935468816 L106A-V161A 0.255127810676114 P36A-T446A 0.254599296167511 L113A-T328A 0.253882950527891 W474A-Y479A 0.253873553793245 G14A-F193A 0.253106334906207 G31A-W234A 0.251898950496249 P154A-H381A 0.250277569271843 S389A-Y479A 0.249571120275489 M393A-I400A 0.248538329900612 Q24A-T244A 0.247865661253381 Y98A-S379A 0.24629709377998 G406A-F449A 0.246275716666911 N17A-Q240A 0.24620192845777 I35A-A40A 0.245004973292183 G313A-P318A 0.243850114790616 S288A-N311A 0.243615352802637 Q323A-G331A 0.242655691860453 D394A-V403A 0.242364259648933 F243A-E280A 0.242167091760545 S246A-N276A 0.241541660749488 F108A-G313A 0.23975370569539 G398A-G406A 0.23949292325625 L199A-T324A 0.239210460984578 P36A-W234A 0.238502959047058 V94A-M393A 0.238065920802974 G16A-Y97A 0.23778444413383 S389A-A397A 0.236495203011089 L15A-T105A 0.236244703292759 F198A-G284A 0.235965496643939 L245A-G398A 0.235872566582088 V94A-V99A 0.235034323070202 P22A-L283A 0.234451479170167 G30A-G232A 0.234443085984259 A109A-F314A 0.233552238557372 L199A-F204A 0.232473144345553 Q240A-E277A 0.231897342916172 V93A-I481A 0.231852654902902 L283A-P290A 0.231461495708241 S103A-P154A 0.230583729962097 L195A-G284A 0.230581919632599 Y100A-A309A 0.229433274909436 L19A-T244A 0.227114221164495 I38A-V281A 0.225882378317371 T399A-L454A 0.223828607018273 Q24A-F243A 0.222497548447288 P318A-W334A 0.222135844999219 G16A-A25A 0.22149583765677 I110A-G115A 0.221267034069729 L19A-T105A 0.221234789812022 F108A-Y159A 0.220969743615887 G398A-F405A 0.220727860298805 N17A-S288A 0.220429854384236 Y97A-E102A 0.220206340624877 A309A-G398A 0.219923351358216 V94A-V376A 0.21857884785531 V238A-V403A 0.218362304811577 K111A-W334A 0.217784973574395 T476A-I481A 0.216650545173469 G232A-V455A 0.216256546729412 G16A-Q240A 0.21548255760305 I375A-A380A 0.2152140728932 L15A-G342A 0.214817933488947 V99A-M393A 0.214378682643998 V13A-E280A 0.213786031752978 E102A-V161A 0.213725965191629 G107A-S155A 0.213087653364157 P447A-V452A 0.21271667785779 A25A-A309A 0.21178517429421 G45A-V402A 0.211488851661063 W89A-I400A 0.211325829749256 V93A-D391A 0.211155937062519 L206A-P290A 0.210358837073857 V94A-S389A 0.209510514521504 V99A-F340A 0.208987872096113 V114A-G327A 0.208501880808376 I96A-V383A 0.208163167164233 D394A-I400A 0.207927460513266 Y37A-F449A 0.206980925094729 V197A-G285A 0.206569457583712 F18A-Y98A 0.205831818901993 M384A-V473A 0.205329896409684 T105A-T328A 0.204997476973 I96A-A380A 0.204353956980312 W234A-G239A 0.202563092408287 M34A-L43A 0.202344234773563 I96A-I375A 0.202170393463395 Q240A-G398A 0.201541716189102 G14A-A341A 0.201532301351492 V238A-F395A 0.201470282523139 H381A-Y479A 0.201104826084329 F404A-V452A 0.200751477031041 Y37A-L42A 0.200300757224706 Q24A-G313A 0.199488207910145 S286A-P318A 0.19857067115573 F395A-V403A 0.198440988616846 A26A-A236A 0.198130461291356 V93A-F377A 0.198079626231123 F162A-V376A 0.197680987470015 V23A-M34A 0.197514920655916 Y100A-N311A 0.197369384331132 V93A-F484A 0.197122657946754 G326A-W334A 0.196315918871802 P22A-G398A 0.19629711426682 T408A-I445A 0.19628701522666 I160A-T165A 0.195652170768852 T244A-G342A 0.195380234111968 V203A-S322A 0.195244769994879 P231A-Q240A 0.194823842487527 F193A-F198A 0.194636249186783 V93A-H381A 0.194596550395493 D394A-T476A 0.194469304828296 T105A-N311A 0.194299745600066 G107A-T328A 0.194027736760273 V99A-G342A 0.193287251094613 G232A-F395A 0.192906858539041 A40A-E277A 0.192746346173019 G16A-I241A 0.192347895442833 V13A-F243A 0.191416981253769 T165A-A341A 0.191031170004013 L88A-M393A 0.190352777862838 V117A-I315A 0.18925846109617 A109A-F332A 0.18906972082715 L382A-K388A 0.188847669619678 L382A-S389A 0.188336425189449 F108A-N311A 0.187892087825713 G16A-T399A 0.187186416901969 A309A-T399A 0.187105241069419 P290A-L312A 0.186404290629007 P22A-P36A 0.186364924845056 A95A-G398A 0.185713772396287 N17A-G239A 0.185631978208097 V94A-L390A 0.185187309064886 A40A-I445A 0.184866873581078 P36A-V233A 0.184808079499585 G308A-D391A 0.184773751818228 A25A-E280A 0.184749552196779 P91A-G239A 0.18461241718384 Q24A-E280A 0.184605623942523 V117A-F329A 0.184119705519993 Y98A-E392A 0.183369735745569 R20A-Q240A 0.183289714600909 V23A-F33A 0.183096230809018 Y100A-S155A 0.182903483923158 Y100A-F314A 0.182273220091709 T105A-F310A 0.181851809845677 V376A-Y479A 0.181779152975562 P91A-L483A 0.181752427842196 L19A-S288A 0.181729861118232 F41A-T244A 0.181605413467928 G406A-Y444A 0.18113928796951 V281A-S286A 0.180823843044494 Y97A-W104A 0.180304350688071 Y444A-F449A 0.180021751885056 T165A-A374A 0.179935090276331 F162A-F377A 0.179609367536652 V93A-A397A 0.17958397653253 G239A-L407A 0.179446910905847 G308A-L386A 0.179338152083535 G16A-N311A 0.179191068046018 G285A-L317A 0.179161644819909 Q323A-F329A 0.179073474829903 T244A-A397A 0.179073053785015 E102A-A380A 0.178981682313917 G239A-L454A 0.178515035089306 N276A-G285A 0.178454080468053 A40A-T399A 0.178184092312923 I96A-M393A 0.177233045847585 Y98A-F395A 0.17688036302079 Y100A-F335A 0.176643275254291 M34A-S286A 0.176116243594159 P91A-T244A 0.175775178975039 T105A-T316A 0.175180396379031 I235A-L453A 0.175105193071718 T105A-L338A 0.17475490079678 Y37A-E280A 0.174197673403393 G45A-N276A 0.173658109832877 L390A-F395A 0.173570136832327 F385A-V473A 0.173099837420551 F314A-G331A 0.17298286088117 V203A-P290A 0.172959721184924 P118A-L330A 0.172940235066267 A291A-F314A 0.172340358817197 P154A-L386A 0.172251495261474 L15A-S288A 0.172077832766631 A32A-I38A 0.171198943524021 P22A-F310A 0.171023420481542 V13A-S246A 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