[Thu Aug 25 00:27:58 2016] >Input file: TM3V5UATG.pdb >TM segments: A7-24_A42-59_A73-93_A105-120_A123-139_A169-183_A206-222_A229-250_A260-275_A280-295 MAIDEN score = -101.9125 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- W125A-S249A 6.83166254496496 I55A-A244A 1.92213700993864 F9A-F182A 1.6022408406222 W125A-L250A 1.40561432637502 C78A-N237A 1.3324563768216 S20A-V216A 1.19405132210318 I79A-L264A 1.12929920671567 I91A-W283A 1.12493774799537 C80A-Y292A 1.0695701662394 L84A-L289A 1.04253881885115 I91A-R282A 1.0128998647246 I82A-V233A 0.969329609250354 F23A-V216A 0.965130371907098 V85A-L214A 0.94538744368699 F9A-V183A 0.904815341859752 F274A-I280A 0.898455489092109 W22A-I170A 0.894945342747969 E54A-A206A 0.89173875929417 D21A-A220A 0.887142176227517 W125A-A246A 0.881131506231245 Y108A-I234A 0.875593319437721 I75A-Q260A 0.848809858115798 Y108A-I238A 0.840183426852361 A179A-P212A 0.816815039145196 P53A-P212A 0.797933822243188 W22A-L172A 0.781970731723892 L16A-V175A 0.767858791953667 I113A-V265A 0.760489641793424 I82A-S268A 0.750423569880744 F23A-L172A 0.733994299414396 A47A-E213A 0.729822251393198 I79A-Y292A 0.72610089046937 F9A-L181A 0.720206152195054 D127A-A246A 0.714143825514349 I280A-G285A 0.70791752766372 L86A-V233A 0.703107941688867 L13A-F182A 0.69606853651625 I75A-M261A 0.679005827303373 I82A-F288A 0.672677017168239 F23A-I169A 0.667825920841517 F274A-Q284A 0.666247131054897 L109A-L269A 0.657515606856019 E213A-V233A 0.650905940124564 I118A-F123A 0.649177510496508 L176A-P212A 0.64440636945309 E54A-D240A 0.634771715138868 L15A-V175A 0.633307149187159 L109A-Y272A 0.62683048291544 S89A-S217A 0.621445587386016 F135A-G243A 0.61279989683475 C78A-D240A 0.600151888309735 P53A-L176A 0.600088020540021 I82A-M267A 0.594590377405638 F135A-A239A 0.594531526344664 Y8A-F182A 0.585503469735523 L131A-I241A 0.581617633722021 S124A-L250A 0.581214982398386 F23A-I170A 0.578784065707085 S20A-L172A 0.570942446977847 I55A-V247A 0.567932061190864 Y17A-V175A 0.566481219344053 W22A-G171A 0.558804311061558 F123A-S249A 0.550994323114291 F123A-G128A 0.52145637551545 I75A-N237A 0.520204364282633 S51A-S210A 0.520128091320847 G12A-V177A 0.518555441836547 L86A-F288A 0.510960130329866 L56A-A244A 0.510282755862328 L11A-F182A 0.497905518877952 L16A-P212A 0.488863908151269 L11A-L181A 0.486035519282416 I55A-L245A 0.478057477669646 N81A-L214A 0.476494112849201 V112A-S268A 0.475782783841417 A47A-V233A 0.470098548645501 L86A-S217A 0.469637311654507 F135A-I238A 0.464595905821914 I92A-R282A 0.45045466948288 S93A-G281A 0.44662953264333 I133A-G242A 0.441189906890229 A43A-S236A 0.436717256809843 A179A-T209A 0.432978884263497 V24A-A219A 0.431991697407989 I126A-S249A 0.430796570136811 L84A-Y292A 0.42885928340365 L84A-F288A 0.422913439114112 Y108A-S268A 0.419910009062486 A115A-L131A 0.417182816337195 V112A-L264A 0.414400487550179 N73A-A206A 0.413010762496068 L10A-F182A 0.409198617409237 V129A-L250A 0.408433601502685 D240A-A246A 0.404534776393174 L88A-L289A 0.403211449059542 S77A-S210A 0.403143476527349 I105A-Y272A 0.402252510175576 A275A-I280A 0.395613855763294 A116A-V265A 0.394807182412416 L15A-S20A 0.394673653434907 I75A-L264A 0.39466554849413 A43A-V233A 0.390402975670891 I48A-A239A 0.386566376118852 T57A-A244A 0.384417247642039 I105A-I234A 0.382641912873029 A47A-A239A 0.382132805073364 I92A-A221A 0.380837095684584 A90A-I280A 0.380199467708175 S89A-V229A 0.380122047887271 A206A-A244A 0.379537808460119 V175A-V216A 0.378623889705773 I75A-I241A 0.376511812077195 L106A-Y272A 0.374122807020543 A59A-A244A 0.374116687848495 V175A-L211A 0.371474032273833 F111A-I238A 0.369222518789911 I241A-A246A 0.368953509213844 M46A-N232A 0.367152870839322 L218A-V229A 0.366801360008908 V263A-A295A 0.36596755639032 T50A-S236A 0.365442155273338 G76A-Q260A 0.365422477201855 L11A-G178A 0.365354271482592 I91A-I286A 0.365220164466507 L13A-A179A 0.360842090774429 L134A-G242A 0.359964230524515 L16A-A179A 0.359014784076522 A74A-A206A 0.358605925626163 V265A-Y292A 0.356279625014057 G49A-L172A 0.355781011678983 L16A-V177A 0.355761432739451 W22A-V175A 0.354892609025536 A262A-A295A 0.354836807551907 A74A-I241A 0.349393882907191 G83A-F288A 0.347840611183539 W22A-V216A 0.346126688279969 S20A-G174A 0.345114496076518 G19A-I173A 0.344006503926599 S51A-T209A 0.342852615774769 V24A-G171A 0.342014884060433 G83A-M267A 0.337023807859741 T50A-C78A 0.336164916375151 V45A-Y138A 0.335791087194389 T50A-L172A 0.335357243358841 E54A-G242A 0.335261285552602 G128A-L245A 0.33426803013787 L88A-R282A 0.334264183682598 N81A-I234A 0.334123947443127 G87A-Q284A 0.333489666345878 V85A-L218A 0.333108599900755 S58A-A74A 0.3318578777364 G231A-A239A 0.329070726799804 S77A-T209A 0.326867875412836 I75A-D240A 0.326537557591028 G76A-A244A 0.324670659694202 F135A-G242A 0.323322634563109 G87A-F288A 0.321813896315421 Y17A-M215A 0.321396919021844 G19A-I170A 0.320618264244589 I238A-G243A 0.31660629565825 G171A-A219A 0.315827629814514 C80A-A206A 0.314454934958433 T57A-E180A 0.313721477364054 A47A-S236A 0.311841326597345 A221A-G281A 0.309663685274228 S20A-A221A 0.308155995096397 L132A-V247A 0.307166075688214 I48A-G235A 0.306258192296694 W125A-V247A 0.305408540597425 I75A-L245A 0.305192389657797 C80A-F207A 0.304188125013621 T50A-L176A 0.303592997204669 I14A-G178A 0.303524182741479 L86A-L230A 0.302889775501481 S58A-V247A 0.300524856010564 A59A-L245A 0.299777394541126 L16A-M215A 0.298949528913055 L16A-D21A 0.298612798834693 T44A-G231A 0.297905342385087 A47A-I234A 0.297585180305133 C78A-M261A 0.297282920087655 I55A-A74A 0.296830801785975 L271A-I280A 0.296477447516587 L88A-L218A 0.296261040952144 L15A-A179A 0.294584392697599 Y8A-V175A 0.292699614834458 I79A-V263A 0.292336322561405 C80A-V85A 0.291583062017726 D127A-L132A 0.291480062019983 S51A-G208A 0.291039556169627 L139A-G231A 0.288143169567298 A43A-I234A 0.287398273664211 M267A-Q284A 0.286665168857557 G49A-S210A 0.28660818176903 F135A-I241A 0.286346002589262 L11A-G19A 0.285823417741651 I14A-G19A 0.285638530785969 G119A-G242A 0.285578678183039 A59A-G128A 0.285025336440045 A43A-L230A 0.283391672238548 S58A-G76A 0.282528093340117 E180A-L211A 0.282267177351469 G49A-G231A 0.279400888034426 I79A-N237A 0.27906490428512 A43A-L139A 0.278870861821972 A115A-D127A 0.277849213809529 R282A-L287A 0.27771166826926 V112A-D127A 0.276457189878255 I79A-M267A 0.275915648408278 E54A-A74A 0.275606101415724 S51A-G242A 0.275463736978067 S217A-V229A 0.274925143453562 L16A-L176A 0.274885301342097 L109A-V265A 0.27468810903544 S20A-G171A 0.273907604817822 G76A-L84A 0.273228014601465 D240A-G248A 0.271478094832104 S58A-L245A 0.2705624318219 L16A-G174A 0.26887542316233 T50A-S210A 0.268175693458981 N81A-G208A 0.267886445294454 L132A-G248A 0.266707783211158 L86A-G285A 0.264659498417513 G231A-Y272A 0.263550984964112 N81A-S268A 0.263337271616975 S210A-N237A 0.263298736372367 A116A-M261A 0.261592173265635 C80A-N232A 0.260074089402794 G83A-Y292A 0.260051806897703 V175A-E213A 0.259645125654102 G119A-W125A 0.259539447982528 L86A-V229A 0.256272379626825 T50A-E180A 0.256185323257008 A90A-A275A 0.255680910228811 S20A-P212A 0.25518424751834 G42A-L230A 0.254732479090064 V85A-V233A 0.254502311880169 L15A-V177A 0.254286655905762 Y17A-S217A 0.253466498660862 C78A-L264A 0.25333864994366 S89A-L230A 0.252848043266148 G42A-L139A 0.251320239566754 A179A-G208A 0.250584728374704 Q260A-S268A 0.249635946916361 G83A-N237A 0.246016365473159 S77A-F207A 0.244524078014476 I173A-G178A 0.244037263369842 L88A-G285A 0.24398532722231 F114A-G242A 0.243644081472648 G42A-N237A 0.243239627095585 L131A-A246A 0.242788808380232 T50A-L56A 0.24188490234354 N81A-G285A 0.241059121013881 S217A-V233A 0.239893095669521 L106A-S268A 0.238362594132346 S93A-L218A 0.238233079107506 A116A-S268A 0.233542095786246 C80A-S210A 0.23314932599557 A115A-S124A 0.232955060069532 V175A-E180A 0.232189244767381 C80A-V265A 0.231638552895305 G87A-L287A 0.231251653571842 A90A-F274A 0.231081457404075 G119A-D127A 0.231075972852185 C78A-M267A 0.230260475346991 F111A-L134A 0.22885930513859 I75A-A206A 0.226838801721767 Y18A-G174A 0.224502137383704 G242A-V247A 0.223905326925586 A90A-A221A 0.223630403634247 C80A-Q260A 0.223505272958743 L13A-P212A 0.220996503391945 G12A-S20A 0.220978018757494 T44A-L230A 0.220249249355098 F23A-A47A 0.219088566831674 D127A-D240A 0.218797931000235 L86A-P212A 0.217598609738189 L88A-I286A 0.217450437018541 F123A-A246A 0.216850456426039 G76A-F207A 0.215478448637874 S210A-A244A 0.212491466635965 S58A-S236A 0.210969756055892 G42A-V229A 0.210832277782428 L172A-V216A 0.210108416580716 V183A-L211A 0.210041710948338 V177A-M215A 0.209628643807803 I82A-Y292A 0.209327627348912 E213A-G231A 0.208999094940385 Y108A-N232A 0.208607356115964 L13A-G178A 0.20859407013068 L214A-V233A 0.207853032758126 I82A-G235A 0.207394147014635 P53A-L214A 0.206102216320268 G19A-G49A 0.204774641984558 A115A-S249A 0.204222652250483 S77A-S217A 0.204146800114839 V85A-L211A 0.203494039507784 D127A-L250A 0.2029374309055 Y17A-K222A 0.202713864776483 G83A-Q260A 0.202220908506105 C78A-S236A 0.202150799603553 A116A-D127A 0.201308883915852 L132A-N237A 0.201112697869375 T50A-T57A 0.201029473584189 N73A-G243A 0.200245511798638 V85A-I286A 0.199174135792983 S20A-L214A 0.198253455004926 N81A-N237A 0.197934407990569 I82A-G285A 0.197737578034 D127A-G248A 0.197661828038465 G83A-I286A 0.19761499556997 A90A-Q284A 0.197297312588155 L211A-N232A 0.197252457946755 V112A-I238A 0.196818874427539 V112A-F135A 0.196340762609215 Y18A-G171A 0.194991323371166 I105A-G231A 0.19488779130915 S58A-S124A 0.194466905921474 V112A-D240A 0.194359118533388 S51A-N81A 0.194217930670322 I79A-L84A 0.193993736600496 Y18A-V175A 0.193659315073656 E213A-V229A 0.193614275709797 L131A-G243A 0.193160651761241 S89A-S210A 0.192826022535748 A74A-G208A 0.192804847241602 G49A-N237A 0.190629793229236 D21A-L218A 0.190566665300123 G12A-A179A 0.19003387870177 A206A-S236A 0.190024344728499 I126A-L250A 0.189989618367665 I55A-G248A 0.189852263561203 G119A-I126A 0.189605095689062 T50A-A74A 0.189557974016209 V107A-G235A 0.188910839003572 L109A-G235A 0.188426539269601 S268A-Y292A 0.188001017560803 V129A-A246A 0.187731288546171 V112A-L269A 0.187240111039317 S93A-M215A 0.186325670117271 L86A-N232A 0.186315660852848 I82A-G87A 0.184844394153902 I92A-G285A 0.184443448009598 G83A-G235A 0.18376350079809 S20A-V177A 0.183749150576432 W125A-G242A 0.183705344406643 L110A-N237A 0.183396855758788 V85A-E213A 0.180598216539206 A116A-I266A 0.180006673086936 G49A-M215A 0.179622681954627 G76A-L211A 0.178757389387063 L132A-A246A 0.178639905986468 T57A-G76A 0.178472979900527 L172A-S217A 0.178287462763576 P53A-L172A 0.178207084750279 G42A-Y138A 0.178069106795064 L56A-G208A 0.178029381750371 G49A-G208A 0.177945074630658 G42A-L172A 0.177934875255289 L273A-G281A 0.177868338082469 G174A-G208A 0.177651479504176 T57A-A239A 0.177130644117937 L110A-V265A 0.176723624844267 F111A-G235A 0.17659872267089 L52A-D240A 0.176497401776958 T44A-L139A 0.176374519058827 T209A-A239A 0.176202795152118 I105A-A275A 0.175881856065379 N73A-L211A 0.175528537537464 S58A-G242A 0.175237768159005 L84A-G208A 0.175221480812285 N81A-S89A 0.17477280758908 V107A-M267A 0.173890063100719 G12A-G171A 0.17383620875917 L86A-E213A 0.173755491673389 A47A-G243A 0.173522624289503 P53A-N237A 0.172877095248913 Y272A-G285A 0.172751276860204 S51A-V175A 0.172089801182937 N81A-G231A 0.171392226541451 I55A-A239A 0.171227043655328 E213A-N232A 0.171196865316808 G87A-M215A 0.171162668133104 G128A-L250A 0.17109891776556 G83A-A290A 0.171074640502883 I75A-G119A 0.170445355025501 L214A-K222A 0.170367791973424 G76A-A262A 0.168962595538877 Y18A-S217A 0.168346483832949 Y272A-G281A 0.167809909974674 L139A-N232A 0.167160492159987 Y8A-G174A 0.166804575842884 S20A-M215A 0.166790432772309 A220A-G235A 0.166616941910822 G235A-A246A 0.166433915767665 A59A-D240A 0.166409134106776 L56A-S249A 0.16624816597674 A115A-V263A 0.165210042336406 V175A-M215A 0.164529083607558 C78A-G231A 0.163978668305657 V112A-V233A 0.163837943024067 A115A-G235A 0.163700366648905 I75A-I266A 0.163438425500389 V107A-F135A 0.162774745554553 G19A-A221A 0.162573293739477 D21A-M215A 0.161733611152162 G178A-A219A 0.161546853182736 S236A-M267A 0.161299186049772 I105A-N237A 0.161059686073515 T44A-G243A 0.161012795277381 V85A-S217A 0.160814377599048 A43A-F135A 0.160651361273111 S77A-Y292A 0.160500593316721 A74A-L245A 0.160450716648436 C78A-L214A 0.160075548611164 L56A-S210A 0.159927914114518 S268A-Q284A 0.159791220670127 V112A-A246A 0.159393008145466 L109A-S268A 0.159230319952513 I75A-I234A 0.159174874733455 M46A-G174A 0.159098079662346 F23A-V175A 0.158940521356162 T50A-N81A 0.158861181407176 I48A-I173A 0.15872685330008 C80A-L218A 0.158481776133629 T44A-D240A 0.158303361752405 G242A-L250A 0.158221233446843 S77A-M215A 0.158098438441343 S51A-F135A 0.157639269213986 G87A-I92A 0.156958449933872 S20A-S51A 0.156169452195583 V107A-Y138A 0.155714573765705 I55A-G243A 0.15570120781486 F123A-G242A 0.15545498856884 A59A-L250A 0.155084787134994 A220A-G281A 0.154929188824241 G42A-L218A 0.154895743177263 L139A-N237A 0.154752562453806 I55A-I241A 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