[Wed Aug 24 18:22:05 2016] >Input file: TM3V5UCGD.pdb >TM segments: A10-27_A39-54_A74-92_A104-118_A127-143_A155-172_A199-214_A221-237_A251-266_A275-290 MAIDEN score = -58.5792 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- BBeads pair Empirical energy ----------- ---------------- F39A-M221A 1.89428970443292 I41A-M46A 1.36391574494382 W22A-I162A 1.07810451738674 W22A-L160A 1.07465155638254 I75A-Q253A 0.976271196169726 F39A-V222A 0.965696995959469 F23A-L160A 0.907929629694139 F23A-L161A 0.904640215059849 L131A-I234A 0.810640925330174 W22A-L161A 0.783503949973092 W22A-I163A 0.767406914637371 L84A-L282A 0.747194166388461 D21A-L160A 0.743603220192464 L16A-D21A 0.739681808214604 I118A-D127A 0.739341782874684 L16A-V168A 0.735275108073255 D127A-L132A 0.733929650720848 L15A-V168A 0.728563699122006 E54A-A74A 0.704577317960998 V40A-T142A 0.701177405257872 E54A-D233A 0.70105980808408 I41A-G224A 0.696925486611331 L84A-Y285A 0.689881190708638 L25A-L160A 0.683028939189783 G26A-V159A 0.673269628103013 L106A-Y265A 0.672069899626898 W22A-L165A 0.668305067321649 F135A-I231A 0.662613695183453 G19A-I163A 0.653232878712748 C80A-F200A 0.650675595736988 I79A-L257A 0.649731873278292 I41A-M221A 0.64339131831842 A214A-V222A 0.6329989817976 I91A-G278A 0.632768052255695 V209A-A214A 0.618432140756772 V85A-L207A 0.613005913983995 V130A-G235A 0.607208333851432 F23A-I162A 0.602522139569578 R275A-L280A 0.600706510217292 L169A-P205A 0.599224944806636 G26A-F156A 0.588428684067378 I105A-Y265A 0.587069237234921 A116A-N251A 0.583911362294182 S27A-L161A 0.58338325722635 L88A-R275A 0.579180177551548 A213A-M221A 0.577204800963047 L25A-S157A 0.576873445929397 L16A-P205A 0.571527614149162 Y18A-G164A 0.563793251122739 F135A-A232A 0.561417347755855 V85A-A90A 0.559776981529488 G87A-R275A 0.55839632586387 I231A-G236A 0.557850038393111 Q277A-L282A 0.553467683034848 Y108A-I227A 0.549715610489407 F23A-V209A 0.545711740653838 I79A-Y285A 0.543219067770556 A90A-W276A 0.526860279147251 T50A-T202A 0.520373975341961 F39A-L223A 0.518243775251294 G42A-V226A 0.515817013320971 S77A-F200A 0.513758241635121 I75A-D233A 0.511385914911065 A74A-N230A 0.505061922245309 S20A-L165A 0.50350347874585 L86A-F281A 0.502840167178054 C78A-L257A 0.496427540276738 S89A-S210A 0.491412921272349 M254A-I259A 0.487570069406571 S229A-I234A 0.487556059928299 E206A-L211A 0.483455183486067 V159A-G164A 0.482377132154793 I41A-N225A 0.481973757199204 V85A-E206A 0.479437147746383 D21A-V209A 0.479391849460818 C80A-L86A 0.478279630300072 L15A-S20A 0.476629923745559 I48A-A232A 0.472920981914571 I79A-L84A 0.472695702856575 Y18A-G167A 0.468446703331495 A213A-V222A 0.468402611264174 I82A-M260A 0.457171078794305 I75A-N230A 0.455575854441811 C78A-M260A 0.453676897234263 I166A-G171A 0.453060079658539 F23A-I163A 0.44386560470616 V24A-A213A 0.441446080753385 T44A-G224A 0.441180136619183 A47A-V226A 0.440153036033313 E54A-P205A 0.436591166175719 P53A-E206A 0.432584800558697 I14A-G19A 0.432371261259556 I82A-F281A 0.428889248584484 L84A-F281A 0.423230931552742 G12A-V168A 0.422271902796325 I48A-G228A 0.418155397740092 V24A-A212A 0.418153091988538 L280A-Y285A 0.417381318970055 L86A-V222A 0.415828298841101 A47A-A232A 0.408957092281395 F23A-L165A 0.408067564686921 A172A-T202A 0.405863930826468 Y108A-S261A 0.402723262877716 Y285A-A290A 0.400104975642686 A43A-V226A 0.398541804845104 C78A-V226A 0.397035830273149 V24A-L160A 0.395245329649329 S51A-S229A 0.394332868105339 V112A-L257A 0.39184117523797 L165A-V170A 0.389876866114705 A172A-P205A 0.389024939025802 D21A-A213A 0.386425477948919 L204A-V209A 0.386003116810777 S51A-T202A 0.385283638846435 S27A-S157A 0.383803028518957 V129A-G235A 0.381650367383635 Y17A-V168A 0.381422186660187 A255A-A288A 0.378723047468407 S77A-S203A 0.376844707456118 E206A-V226A 0.375168370781942 T44A-L139A 0.371874729595822 S20A-V168A 0.365076514329152 T50A-S203A 0.361264181162238 T50A-C78A 0.359156980742788 V252A-Y285A 0.356369359495307 A172A-L204A 0.354330197783529 P53A-N230A 0.350447263695636 S77A-I82A 0.346291785058218 V258A-Y285A 0.346258114747914 V112A-V258A 0.346186809526632 F39A-G224A 0.345393745997454 L52A-T202A 0.344099036179028 A43A-L223A 0.342744460748461 S20A-M208A 0.340494077669679 L109A-V258A 0.340178013619991 L84A-S89A 0.338431956899294 Y17A-M208A 0.337790703503725 A90A-Q277A 0.337390577543932 V40A-V143A 0.337354455882303 I133A-G235A 0.336817144251692 A172A-A199A 0.335981904625109 V24A-L161A 0.3330190830077 W276A-F281A 0.332296994101069 V40A-M221A 0.330435759114593 A43A-S229A 0.32823340544935 T50A-L204A 0.327972955749502 A74A-G201A 0.327626391260577 L25A-L161A 0.325958698965217 D21A-V159A 0.325421227984672 G42A-A232A 0.325340371380016 L15A-V170A 0.324688337545712 V258A-L263A 0.324619699970158 L134A-G235A 0.32403133463775 G26A-A213A 0.323805947005875 W22A-V209A 0.322337709769399 A43A-I227A 0.318806710067687 V40A-V45A 0.318752795666009 A43A-S51A 0.318542167211109 I136A-W141A 0.316055717796655 A74A-I234A 0.313725596658085 I75A-M254A 0.313290337518238 G19A-G49A 0.312974981652411 S27A-A43A 0.312769095324131 D21A-L161A 0.312373220613696 W22A-V159A 0.312026232220862 A43A-L139A 0.311259839349569 E54A-C80A 0.311078797696009 A116A-M254A 0.310316171702035 A47A-S210A 0.308866269487733 G42A-L223A 0.308671391225946 V155A-L160A 0.307746061026211 C80A-V209A 0.307493328255978 F281A-I286A 0.306807848692483 G19A-I166A 0.303935137326118 Y138A-V143A 0.301978647498963 Q253A-V258A 0.301846050760038 I14A-G171A 0.301386992640547 S157A-I162A 0.301066591037362 A43A-I48A 0.299939537940557 L207A-A212A 0.295854133395945 L109A-L262A 0.295685573948215 L13A-A172A 0.294676479683945 L13A-Y18A 0.292910399856021 L16A-M208A 0.292647346546097 I113A-V258A 0.292233394284515 I82A-V226A 0.290992212020671 L16A-A172A 0.290958599299997 C78A-D233A 0.290234222065837 L110A-A115A 0.290079487413576 V85A-S210A 0.28873396559518 C78A-V222A 0.286836356969941 N81A-I227A 0.286519224935381 L11A-G19A 0.283095363946377 F111A-A116A 0.282955808908611 S210A-M221A 0.281510201144018 L132A-G236A 0.280768634645375 S210A-V222A 0.280262914941151 S20A-A214A 0.279808147985032 V209A-V222A 0.277213164828861 V85A-V209A 0.27689060024299 T44A-G49A 0.276042491404558 L16A-G171A 0.274050734482199 G19A-S210A 0.273596120624718 G19A-A213A 0.273049865572339 G87A-L223A 0.271891348272133 D127A-G236A 0.267451687124943 A47A-G236A 0.265226318386095 F39A-N225A 0.261764009118083 V112A-D233A 0.260896725362961 E206A-V222A 0.259455596510723 G19A-E206A 0.25763558047019 G128A-A232A 0.25759783356316 G83A-L263A 0.257089405164952 A172A-G201A 0.256515950169768 V168A-L204A 0.254153386216249 G76A-A237A 0.253647607691326 G83A-L280A 0.251739215105435 S261A-Q277A 0.251519119041478 L131A-G236A 0.249052987330713 N81A-S261A 0.248905994782892 C80A-Y285A 0.248232784135927 Y138A-G236A 0.245847977290294 T50A-S229A 0.243970022985715 G87A-L264A 0.24356493525714 G83A-W276A 0.242409024182018 L13A-P205A 0.242142489462255 I133A-Y138A 0.241752794042092 C80A-P205A 0.237945749128903 V112A-Y138A 0.237941441543523 C80A-V85A 0.237096647096974 G224A-A232A 0.236771943786023 A47A-G235A 0.235842025215392 I227A-A232A 0.235604436264811 I91A-W276A 0.23508973881076 G49A-N230A 0.234969757070166 G49A-L165A 0.234801276836634 N81A-M221A 0.230417558659169 G83A-N225A 0.229173723127076 L86A-S210A 0.228250513342829 G83A-E206A 0.227501023475085 V129A-L134A 0.226695862828306 Q253A-S261A 0.226538615725307 L86A-Q277A 0.22558559589921 G42A-V222A 0.22551446448807 L84A-E206A 0.225421520812687 V85A-I227A 0.224603479111361 Y108A-I113A 0.223354623602645 V45A-I227A 0.223138525663889 S51A-S210A 0.223075934951604 Y138A-V226A 0.222543112452788 G87A-N225A 0.222234133192135 I136A-G228A 0.220948056832678 G42A-M221A 0.21884224352162 G87A-L280A 0.218790303137052 A116A-S261A 0.217683962469294 S89A-S203A 0.217141650867771 S89A-L207A 0.217126683088899 V252A-L257A 0.216378583176919 S77A-S210A 0.214522306462642 A74A-A115A 0.214118278035583 I105A-L264A 0.213509007773283 S27A-P205A 0.212781892920816 G42A-N104A 0.211939919295137 G167A-V209A 0.209645806443595 N81A-G201A 0.209136251794258 L132A-I234A 0.208600340870557 V159A-L165A 0.208452510025634 L109A-S261A 0.208307463984367 L109A-F114A 0.208052905002775 D21A-V222A 0.207049748948775 D21A-G26A 0.206965575286304 V40A-I48A 0.2069603363522 L13A-G171A 0.206630651769711 Y108A-N225A 0.206552814627278 S77A-G228A 0.206489473876672 V24A-V209A 0.206476100425032 I92A-A214A 0.20647555390758 G49A-V209A 0.20635252857027 S27A-V155A 0.205966025663322 I79A-V256A 0.205904816566486 C80A-Q253A 0.20494565624172 S51A-N225A 0.204865735603804 F111A-A232A 0.204599989182149 V256A-F281A 0.204587825006775 S203A-A232A 0.204065457300337 L161A-P205A 0.2039213218959 V112A-Y265A 0.20376166955776 C80A-G201A 0.203505058338617 L223A-M260A 0.202959829106098 A115A-D233A 0.20282286325829 I137A-T142A 0.202087818048484 G76A-P205A 0.201171128466194 L139A-N230A 0.200067860185711 A199A-D233A 0.199612827510161 G12A-S20A 0.199045050441772 F39A-A213A 0.198002205531439 V170A-M208A 0.197847317680913 G228A-D233A 0.197240707875879 N104A-R140A 0.197183524194654 T44A-W141A 0.196698936856957 S77A-Y285A 0.196598026915964 G42A-N230A 0.196543208369949 D21A-A214A 0.196465230200721 V168A-E206A 0.196351452241471 L25A-V159A 0.195974883579455 V226A-Y265A 0.195540815791992 D21A-L211A 0.194386249452693 E54A-N225A 0.193584983079373 I91A-R275A 0.191817412166048 G83A-A283A 0.191719178425134 L16A-V170A 0.191626367091136 S20A-L160A 0.191589216141681 W22A-P205A 0.19105634401363 V258A-L264A 0.189827169156813 E54A-A172A 0.189266094782267 M46A-L211A 0.187585594951995 V107A-M260A 0.187142951778053 V85A-F200A 0.186987493631385 S210A-N230A 0.185314990782703 N251A-V256A 0.185246574630635 C78A-S229A 0.185204487236535 S89A-L211A 0.184910311976688 G83A-L284A 0.184195245969609 N251A-S261A 0.184175853984203 Y18A-E206A 0.184075241411065 A116A-I234A 0.183912326559248 S27A-A212A 0.183882207980396 S77A-M208A 0.183737734054043 T44A-G235A 0.183735384563232 A116A-D127A 0.18306479222994 G164A-A172A 0.182320766205798 M46A-G167A 0.182206119189261 Y108A-M254A 0.181857712925739 Y265A-G278A 0.181175132737406 N81A-S89A 0.180497306244527 A43A-E206A 0.18008096659757 G87A-V226A 0.179168304345238 F135A-G235A 0.178894391241609 L211A-G224A 0.178556455171618 G42A-L207A 0.178378895984583 S20A-G164A 0.178355191670386 F114A-A255A 0.178312149960842 N81A-L263A 0.178032009333634 M254A-L284A 0.177996044298262 G83A-N230A 0.177622233872338 G42A-I227A 0.177244388237312 G83A-I289A 0.177149850699815 G42A-M208A 0.176686635708758 A43A-M221A 0.176287656223983 I166A-T202A 0.176232959156735 G76A-N251A 0.176185902805523 V45A-Y138A 0.174806388895813 G76A-L84A 0.174634549932792 L109A-S229A 0.174528989872439 L88A-G278A 0.174371013023194 V256A-S261A 0.174162329296863 G26A-G224A 0.173994030638958 I14A-G167A 0.173991262696901 L132A-G228A 0.173217723411189 G19A-A172A 0.172309109169541 S27A-V209A 0.171131915326777 L158A-I163A 0.171121624888481 C78A-G278A 0.170301719784794 F200A-Y285A 0.170258417191704 S89A-V226A 0.169960499168744 I162A-G167A 0.169118429570111 G167A-T202A 0.168930658477782 G87A-I279A 0.16760029821978 P53A-G228A 0.167220872524629 G49A-G224A 0.167147140648149 V85A-G224A 0.167026625871508 A115A-G228A 0.16648942727095 A47A-T142A 0.166394369798694 M260A-Q277A 0.165521780193433 I91A-A214A 0.165317920196062 I75A-A115A 0.165300388983074 D21A-M208A 0.165217574800142 G83A-A214A 0.16487162230308 M208A-A213A 0.164747143193524 A47A-G167A 0.164744314591419 L161A-M208A 0.164453334650888 G19A-A47A 0.164194863933348 L139A-G224A 0.163834398406236 L84A-P205A 0.162457900572887 G26A-A214A 0.162372184144835 G83A-S203A 0.162151348310566 A43A-V209A 0.161880189442437 G26A-L158A 0.161832570307324 G224A-Y265A 0.16074997750004 I92A-V222A 0.160552076423635 I113A-N251A 0.160543149750433 I48A-I231A 0.160502943428838 I137A-I234A 0.160436854901985 S20A-S89A 0.160225165171757 L223A-G228A 0.160160391211774 G26A-T44A 0.159995526137479 G76A-S229A 0.159633037181905 G26A-G42A 0.159596408910341 I75A-I289A 0.159333925269376 F39A-M46A 0.158708410301989 N104A-M221A 0.158148738390014 W22A-L158A 0.157909018050018 A74A-V252A 0.15680147750237 S77A-V256A 0.156729974085151 A90A-A214A 0.156583389730559 G19A-L165A 0.156280473517717 C80A-S203A 0.156208364633817 G83A-I259A 0.155751082691692 F23A-T50A 0.155132676901019 V256A-L284A 0.155063408641698 R275A-A283A 0.155032029520017 G87A-L282A 0.154933877837462 M208A-G224A 0.154879627705149 D21A-N225A 0.154772737090296 I105A-M221A 0.153373337551378 F114A-N230A 0.153263857570654 G49A-A199A 0.15273211524705 L139A-N225A 0.152619300001252 I82A-G87A 0.152549957784918 G278A-A288A 0.152148642365718 I231A-M254A 0.151781298574033 T44A-D233A 0.15097420741142 I75A-I113A 0.150738209448138 L165A-S203A 0.150608383411946 F200A-S229A 0.150605056368337 I82A-I231A 0.150603309820998 L86A-G278A 0.150068727628864 L264A-Q277A 0.149989574641686 M46A-S77A 0.149958384794275 L15A-I166A 0.149742591612015 A74A-I82A 0.149650225639715 S89A-V222A 0.149244779428698 L131A-G228A 0.149170489927682 L11A-G171A 0.148958096292115 L88A-Q277A 0.148818693828697 A214A-R275A 0.148641048637848 C80A-L264A 0.148637806144133 A74A-A199A 0.148542851296234 G167A-L207A 0.148533770356615 G26A-A212A 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