[Wed Aug 24 18:21:29 2016] >Input file: TM3ZDQATD.pdb >TM segments: A218-236_A312-333_A434-451 MAIDEN score = -30.2994 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- P312A-S320A 0.363616120516327 P312A-Y437A 0.303719362129351 N313A-S320A 0.255579368945489 P323A-S449A 0.185076513120153 V318A-G442A 0.180515434719909 A329A-G442A 0.161636831452177 S326A-G442A 0.15598163377541 V321A-I328A 0.154517031073752 V321A-A438A 0.148667882360796 V321A-V441A 0.1369117493416 V321A-V330A 0.133896318655681 P324A-G333A 0.133169409312958 S326A-I445A 0.12823029442815 V321A-A329A 0.122047213352699 L319A-Y437A 0.121529450317433 L319A-L435A 0.120821760554597 L314A-M436A 0.119248998328496 P312A-A438A 0.115410615385616 V318A-S326A 0.113746550345533 S219A-A227A 0.109946013288722 A329A-S449A 0.109395098494564 A315A-G442A 0.106735072543624 F317A-A438A 0.104883925656632 A438A-G446A 0.099168548530044 V318A-F434A 0.0988246054984598 A220A-A228A 0.0973606261563686 V321A-G442A 0.0946681263243347 V330A-S449A 0.0937763711196213 A315A-V441A 0.0928974584459343 L319A-V441A 0.0911122292932438 V322A-A438A 0.0892335763866118 V325A-G442A 0.0878292280194302 A315A-P323A 0.0826002385662052 P323A-Y332A 0.0820357699066472 V318A-W440A 0.0800902530669489 A315A-M436A 0.0797213782498275 V330A-G446A 0.0792196851286802 L319A-F439A 0.0780034403654719 G442A-S449A 0.0726131353787132 V322A-G446A 0.0725327101757982 L314A-F439A 0.0693241617576419 N313A-A438A 0.0692024345795117 L319A-G442A 0.0691457918210769 S326A-S444A 0.0670160404565783 V321A-S326A 0.0645862252797071 N229A-Y234A 0.0634952814893404 F317A-F439A 0.060677083087965 S444A-S450A 0.0582969991384943 G442A-S450A 0.0552901454678876 V441A-S449A 0.0545352191333941 N313A-Y437A 0.0535503515723115 V318A-M436A 0.0521317886954433 L218A-A228A 0.0512273995961809 L319A-I445A 0.0450083765287133 N313A-F434A 0.0446189368899398 V221A-A230A 0.0412553735354475 A329A-I445A 0.0402077154158818 P324A-Y332A 0.0386718712951808 L319A-F434A 0.0385205134640492 V318A-F439A 0.0382225417488602 G333A-S449A 0.0378441759058514 A329A-G446A 0.0344055668358734 S326A-G446A 0.0330533633363115 V322A-I445A 0.032145558365408 P323A-G446A 0.02753768077622 Y437A-G447A 0.0222568575562496 L319A-S326A 0.0214450414464391 A227A-Y234A 0.0202445527469015 A226A-Y234A 0.0116045434532961 P323A-V441A 0.0108687395491449 F222A-A230A 0.00426375894940234 S326A-S449A 0.00278057517145891 L314A-P323A 0.00237876207316567 A227A-R232A 0.00220364124054373 F317A-V325A 0.0014523704834386 F434A-G442A 0.000600500766760881 A438A-G447A 0.000182330597829683 A228A-M236A 0.000173355990759294 L319A-S444A -0.000806715402513081 C224A-N229A -0.00169403342185537 F434A-S444A -0.00530365000969013 P323A-A438A -0.00559748861083431 S326A-L448A -0.00852219081726791 V322A-F439A -0.0100626594680415 F317A-L435A -0.0101966812308101 P323A-I445A -0.0105259551759175 T316A-F434A -0.0115926466537073 P323A-I331A -0.0116969550261258 Y437A-G442A -0.013617090641329 S320A-I327A -0.0149337161532983 T316A-Y437A -0.0158926676853026 P312A-L435A -0.0221035407728012 F317A-S326A -0.0249177143493757 V318A-V441A -0.0271271183342483 P324A-I331A -0.0275689297844943 P312A-F317A -0.0290389538265221 L319A-W440A -0.0296456596209982 M436A-S444A -0.0297014687385149 V318A-Y437A -0.0300909228611408 P323A-G442A -0.030686358985895 I327A-S449A -0.0332131721659079 S326A-I443A -0.0343376414094972 V321A-F439A -0.0357135343942039 W440A-G447A -0.0359104170112641 F317A-P323A -0.0373487495440146 V318A-I327A -0.037774147904889 V322A-I331A -0.0380527605324641 L319A-I327A -0.0384698997986019 A220A-N229A -0.0408041688948959 A315A-F439A -0.0444720584217082 F317A-P324A -0.0456416128855475 S320A-G442A -0.0471318996081643 C224A-I231A -0.0481523219041806 W440A-S449A -0.0483097892282607 N313A-L435A -0.0517403782831973 F439A-G447A -0.0572167761860434 G442A-F451A -0.0579784515814814 F222A-N229A -0.0580503934611056 A227A-M236A -0.0590570747085271 V322A-S444A -0.0599321436501805 I443A-F451A -0.0601027302612918 V325A-I445A -0.0602297586005403 S326A-Y332A -0.0602457209436257 F439A-G446A -0.0651711310992606 V221A-N229A -0.0652065573356515 F317A-F434A -0.0689510985092036 S219A-A228A -0.0691588588430871 V322A-I443A -0.0707525695459372 N313A-V321A -0.0711161810998724 S444A-F451A -0.0711700551802015 S320A-A438A -0.0712655685100918 V322A-Y437A -0.0720751374766282 A227A-L235A -0.0725260896372033 P312A-V321A -0.0738039341065835 P323A-G333A -0.0752149863708806 F222A-R232A -0.0752623925461846 P312A-F434A -0.0766118708254213 T316A-V321A -0.0774072551567215 A315A-W440A -0.0819434518888116 S320A-S326A -0.082078785295169 A315A-Y437A -0.0837697595993717 L314A-Y437A -0.0870914304917503 F439A-L448A -0.0872598357262757 V318A-P324A -0.0892236953292196 S326A-V441A -0.0892670388908379 G225A-Y234A -0.0898852539633368 V322A-V330A -0.0905165038177385 A220A-A227A -0.0913225689030597 A228A-Y234A -0.0933864751855935 V322A-L435A -0.0940826175162917 Y437A-G446A -0.0950937859841954 V318A-I445A -0.0957626940185281 L218A-A226A -0.0966645314372752 S320A-I328A -0.0979286351728539 V441A-G447A -0.10042462920385 P323A-I328A -0.100688108703822 V441A-S450A -0.103005696115397 T316A-L435A -0.103957071764162 L314A-V441A -0.105063426389873 V322A-V441A -0.105547200252589 N313A-V322A -0.106923664349716 N229A-M236A -0.108765089490408 S326A-I331A -0.110750400753986 A315A-V322A -0.111144617942099 C224A-A230A -0.111930812370844 V441A-F451A -0.113303832692155 V322A-G442A -0.114574913443216 P323A-A329A -0.118080646548606 G225A-R232A -0.118992202377046 V330A-I445A -0.119304518678736 L435A-G442A -0.122605217753344 T316A-V441A -0.123353133414156 S219A-G225A -0.128271513863142 T316A-A438A -0.129705823840766 L218A-A227A -0.130994689484146 I445A-F451A -0.131913205895941 L218A-G225A -0.132226489576946 V318A-L435A -0.13636253131094 F317A-V441A -0.140373151448359 C224A-V233A -0.140902336531813 F222A-I231A -0.142853736023793 F434A-I443A -0.144312362586309 V325A-G333A -0.145380013945537 A226A-L235A -0.145801094679304 V322A-W440A -0.148195577685593 S326A-G333A -0.14874982404193 P324A-V330A -0.151146552336061 A226A-V233A -0.154750739347941 N313A-V318A -0.155408006097858 L223A-I231A -0.155525745121225 L435A-I443A -0.159949001327616 L223A-R232A -0.160350943174291 F317A-Y437A -0.160501054928724 L435A-S444A -0.161819253671647 G225A-V233A -0.162932318321729 N229A-L235A -0.164533800329163 V221A-A228A -0.165204076659168 M436A-G442A -0.16542936462532 I327A-I445A -0.166111605906198 Y437A-I445A -0.169142473195301 V441A-L448A -0.169241427066512 I443A-S450A -0.170948857716544 A438A-I445A -0.172016969159389 P312A-V318A -0.175751057367929 T316A-P324A -0.17606100867078 L314A-A438A -0.180354720398374 I445A-S450A -0.181129314474043 S219A-C224A -0.188929466307771 V321A-I327A -0.190904635728865 A315A-L435A -0.194194168776997 G442A-L448A -0.197194090272353 Y437A-S444A -0.198873295430211 S219A-A226A -0.201178963724071 A226A-R232A -0.201401270662519 V325A-Y332A -0.20266351226147 Y437A-I443A -0.203011936375558 V318A-P323A -0.203337843905948 W440A-I445A -0.209626127373814 T316A-V322A -0.213495379793076 V322A-A329A -0.214149871146571 P323A-V330A -0.219160591307691 F434A-V441A -0.223698683521881 L223A-A230A -0.225090931041144 A438A-S444A -0.227721309773885 L314A-V322A -0.229915758495919 A220A-A226A -0.231767010829107 T316A-P323A -0.231946374147396 I327A-G333A -0.235203536682143 L435A-W440A -0.235820323766024 I328A-G333A -0.240739398050725 N313A-L319A -0.240843604172006 V318A-V325A -0.240864682051903 S320A-V325A -0.241073058047498 V441A-G446A -0.24131394061362 M436A-I445A -0.24372658690111 L223A-N229A -0.248615563961566 V325A-I331A -0.248951863537789 G225A-I231A -0.251149661191405 M436A-I443A -0.256608914246227 V322A-I328A -0.258025839924093 I327A-Y332A -0.258299431266813 V325A-V330A -0.260181309420545 L319A-V325A -0.260367733749062 G446A-F451A -0.261146763904917 F439A-I445A -0.261640493302194 F439A-S444A -0.263056654787826 W440A-G446A -0.264944273472346 A228A-L235A -0.27414042004303 L319A-A438A -0.274615787045064 L314A-V321A -0.279529079597483 A230A-L235A -0.279721742718948 F222A-A228A -0.281255842952173 C224A-R232A -0.292440368889533 W440A-L448A -0.293203202926277 L223A-A228A -0.303086542588166 L435A-V441A -0.310084815191239 L314A-F434A -0.311522903975202 A315A-V321A -0.311530761312972 G442A-G447A -0.314299849433137 A230A-M236A -0.317482444240428 A227A-V233A -0.319163188132308 I443A-L448A -0.32292031919787 F317A-V322A -0.331215789349078 L314A-S320A -0.335973296493916 I443A-S449A -0.338327204347426 A315A-F434A -0.350542054586498 L218A-C224A -0.350936369716255 V221A-A227A -0.356995043745082 M436A-V441A -0.357105537406913 A438A-I443A -0.357321086998178 P312A-L319A -0.376786150711428 L314A-L435A -0.386238911930214 A315A-A438A -0.411180301277499 L314A-L319A -0.414905984140786 L218A-L223A -0.416254341857331 I231A-M236A -0.41676645382012 F434A-F439A -0.422314901520463 L319A-P324A -0.423143202117631 P324A-A329A -0.424842484954288 V318A-A438A -0.425670693055205 F222A-A227A -0.430258796434096 F434A-W440A -0.432130863116931 A228A-V233A -0.446980791435588 V221A-A226A -0.465160043711324 S444A-S449A -0.471902949703943 A226A-I231A -0.473492829387945 A220A-G225A -0.475133156245388 V322A-I327A -0.476997922829709 G225A-A230A -0.480207232322745 A315A-S320A -0.537205002074278