[Thu Aug 25 00:30:42 2016] >Input file: TM3ZJZCGG.pdb >TM segments: A69-91 MAIDEN score = -4.6794 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- BBeads pair Empirical energy ----------- ---------------- F72A-T77A 0.369168909126298 N82A-I87A 0.367997629169814 I73A-F78A 0.309120637199276 T76A-L81A 0.216166740375352 I85A-D90A 0.180945947767185 F72A-F78A 0.155479707040882 F69A-F78A 0.126969408899132 V80A-I85A 0.122041968909048 F78A-L83A 0.119200978588461 F78A-G86A 0.10336057037366 I73A-L83A 0.0918359451915035 T79A-I87A 0.0887942708811807 I70A-L75A 0.0881706973217695 T76A-I85A 0.0729038729790688 T76A-G86A 0.0702920717478763 F72A-N82A 0.059417880391698 T77A-I85A 0.0533940822859984 F72A-L81A 0.0448236698579141 L75A-V80A 0.0292219086416274 F78A-F84A 0.0279915754984437 N82A-D90A 0.0278767368061474 P71A-T76A 0.026896406491959 M74A-T79A 0.00532070341485458 P71A-T77A 0.00178123098245964 V80A-I88A 0.00142007346626372 F69A-M74A -0.00205301508536682 N82A-A91A -0.00690997629619611 M74A-N82A -0.00948263466470323 L81A-G86A -0.0108287116204373 F69A-T77A -0.0177105385808547 T79A-I88A -0.0213891791187857 I73A-T79A -0.0229187394764105 T79A-I85A -0.0276388857566028 L75A-L83A -0.0395471155063838 I70A-T79A -0.041971165541312 V80A-V89A -0.0435665907218429 I73A-N82A -0.0439538174064626 I85A-A91A -0.0495023855611088 V80A-G86A -0.0514048052320524 T77A-G86A -0.0534692210260641 T77A-N82A -0.0589274428812346 T76A-N82A -0.0601505868809471 P71A-V80A -0.0639632074753183 T76A-F84A -0.0640986452631007 P71A-F78A -0.0671402318379355 I70A-F78A -0.067339382139302 M74A-L83A -0.0701908466765064 T79A-G86A -0.073825765247582 L81A-I88A -0.0757849131779815 P71A-T79A -0.0770912301986435 F69A-L75A -0.084645972498798 N82A-V89A -0.0869368642135129 I73A-L81A -0.0894736883949097 F72A-V80A -0.0976455382998938 L81A-V89A -0.104117450797435 L83A-A91A -0.107601742225345 L75A-F84A -0.10973073552504 F84A-A91A -0.124609085370605 F78A-I87A -0.132819777489825 T77A-F84A -0.135579236044304 L81A-D90A -0.148864630779854 T79A-F84A -0.156785491980928 I73A-V80A -0.16903386978643 L83A-V89A -0.181318392330819 V80A-I87A -0.185176476806003 L75A-N82A -0.187405598107512 L83A-I88A -0.187538759500875 L75A-L81A -0.19193555560491 M74A-L81A -0.200896315048954 F84A-D90A -0.205464103157161 F78A-I85A -0.207593110875447 G86A-A91A -0.213157693025506 I70A-T77A -0.213905322784975 N82A-I88A -0.222980145381574 T76A-L83A -0.23469401184901 F72A-T79A -0.241589999126245 F69A-T76A -0.242148294109596 L83A-D90A -0.251957778653564 I70A-T76A -0.268365764600901 F84A-V89A -0.276174010494022 T77A-L83A -0.296663408614248 M74A-V80A -0.34532279200372 L81A-I87A -0.417037289415805