[Wed Aug 24 19:12:31 2016] >Input file: TM4AYTATD.pdb >TM segments: A218-236_A314-333_A434-451 MAIDEN score = -29.1869 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V321A-I328A 0.221846323273089 V318A-G442A 0.218642600378167 S219A-N229A 0.185314990782703 P323A-S449A 0.179535681729414 V321A-A438A 0.163763189697343 S326A-G442A 0.149999307347682 P324A-G333A 0.149199599515599 V321A-V441A 0.135499663851937 L319A-L435A 0.135329021125168 A315A-P323A 0.125662833405851 V318A-S326A 0.125300703253922 V321A-V330A 0.119186906816732 F317A-A438A 0.119186146786471 T316A-P324A 0.119099544477642 L319A-Y437A 0.118524523887228 V318A-M436A 0.117182120912119 A315A-G442A 0.115941726330566 P324A-Y332A 0.113909599611847 T316A-V325A 0.109741186061069 L314A-M436A 0.106849910891682 L218A-A228A 0.101055680348225 A438A-G446A 0.0979422000745502 V321A-A329A 0.095500921030669 A329A-S449A 0.0946788387746551 L319A-I328A 0.0938017842234385 V318A-F434A 0.0913550316865903 V330A-S449A 0.0889994897319832 V321A-G442A 0.0879264158144801 A315A-M436A 0.0827061264578622 V318A-W440A 0.0826430497917956 S326A-I445A 0.0813920993488413 G333A-S449A 0.077945081979867 A227A-Y234A 0.0736065263810666 V325A-I445A 0.0735879893899156 A329A-I445A 0.0733991183080613 V322A-G446A 0.0731817138243709 P323A-Y332A 0.0720483340505718 V325A-G442A 0.0667858561779493 V441A-S449A 0.0665473157971586 L319A-F434A 0.0659394071004091 A315A-V441A 0.0656234366735 V330A-G446A 0.0645872737788524 F317A-F439A 0.060677083087965 S444A-S450A 0.0605171547648851 A329A-G446A 0.0569720226320489 L319A-F439A 0.0567717822843616 V318A-F439A 0.0551167361713762 L319A-I445A 0.0539903985254715 G442A-S450A 0.0537869114442083 L314A-F439A 0.0518381161271839 A228A-M236A 0.0483621176141669 F222A-A230A 0.0480336029746358 V322A-A438A 0.0425999672158599 L314A-P323A 0.0412121509220587 S326A-G446A 0.0403256970255184 N229A-Y234A 0.0339076826788698 L319A-G442A 0.0332811878164696 L319A-W440A 0.0267214432196718 P323A-V441A 0.0243265207072003 V318A-Y437A 0.019625281710308 S219A-A227A 0.0185336808842544 A226A-Y234A 0.0163647988928701 S326A-S449A 0.0139440185785602 C224A-N229A 0.0125166011521629 A220A-A228A 0.0117842405523959 V322A-I445A 0.00987666374166274 F317A-P324A -0.000105324821638497 Y437A-G447A -0.000623606425582679 S326A-L448A -0.000842471959630563 P323A-G446A -0.00507022073193308 V322A-F439A -0.00805225586521585 A227A-R232A -0.00910398369193022 Y437A-G442A -0.00994665469649564 T316A-F434A -0.0109218776318076 T316A-Y437A -0.0118435961219969 P323A-I331A -0.0138899092948244 P323A-I445A -0.0145969670893827 A220A-N229A -0.0167503324988856 A438A-G447A -0.0181341740423768 F439A-G446A -0.0202354294255898 W440A-G447A -0.0211969016506126 V322A-Y437A -0.0237879546972526 S320A-I327A -0.0241131388918062 F317A-V325A -0.0262256761324777 A227A-L235A -0.0262736296233133 P324A-I331A -0.0309428031916648 V221A-A230A -0.0342862679327443 V321A-F439A -0.0357135343942039 M436A-S444A -0.0360577079075703 P323A-G442A -0.0365114595045999 V318A-V441A -0.0387439573336232 F317A-P323A -0.0397657000658582 V221A-N229A -0.0400379823998658 F439A-L448A -0.0410649967298227 I327A-S449A -0.0439272803748949 A315A-F439A -0.0454808166811214 F317A-S326A -0.0480110735403145 V321A-S326A -0.0481691922343004 S326A-I331A -0.0482638662700587 A227A-M236A -0.0491847968036545 W440A-S449A -0.0512799576265199 L319A-S326A -0.0524630307169272 F434A-G442A -0.0541625169800464 F439A-G447A -0.0564890615240148 P323A-A438A -0.0576674160703812 V322A-I331A -0.0581331386090032 T316A-L435A -0.0589808772917335 P323A-G333A -0.058992104169342 V441A-F451A -0.0598574465610184 I443A-F451A -0.0626623654581437 V322A-S444A -0.0644911913462178 G225A-R232A -0.0659155142230965 S444A-F451A -0.0662318612640434 S320A-V325A -0.0671992065956051 F317A-F434A -0.0689616859274151 L319A-V441A -0.0703239178774053 S326A-Y332A -0.0722171852071527 F317A-L435A -0.0730184324637344 F222A-R232A -0.073328696839057 C224A-I231A -0.0745879737104049 F222A-N229A -0.0769854496955811 S326A-I443A -0.077423331997986 S320A-A438A -0.0806589508240281 V322A-V441A -0.0846364038788638 A315A-Y437A -0.0850374936346772 G442A-F451A -0.0852547134992472 A228A-Y234A -0.0860044334446386 V441A-S450A -0.0884464461645125 A315A-W440A -0.0909643869886785 S326A-V441A -0.0913199781810976 G225A-Y234A -0.0920045337040318 I445A-F451A -0.0931599384238915 V322A-I443A -0.0935114307214802 L314A-Y437A -0.0944901355218368 T316A-V321A -0.0951801542601212 L218A-G225A -0.0953243822121506 Y437A-G446A -0.0955190375778217 V441A-G447A -0.0980282889867374 L218A-A226A -0.100815265965737 P323A-I328A -0.101890102385705 L314A-V441A -0.103206541062914 V322A-V330A -0.104091176021549 S219A-G225A -0.107574356129415 F434A-I443A -0.108397189014124 S320A-I328A -0.108717913700318 N229A-M236A -0.111015660394672 V322A-L435A -0.11103938906465 V322A-G442A -0.112204190121414 S219A-A228A -0.113132870201307 F222A-I231A -0.114608077422051 S320A-S326A -0.115646579488099 P323A-A329A -0.119364058630226 V330A-I445A -0.121977751140364 V318A-P324A -0.122645459184916 V318A-I445A -0.123807158318638 L319A-I327A -0.126846110654718 V325A-Y332A -0.128456862998671 T316A-A438A -0.129019279923861 G442A-S449A -0.130758098181287 F317A-V441A -0.131181502356756 V318A-I327A -0.131417394930227 P324A-V330A -0.13161314248726 C224A-A230A -0.134432015247454 L218A-A227A -0.135552813299074 C224A-V233A -0.14020225531436 T316A-V441A -0.143884327040595 F222A-A228A -0.144405356135032 S326A-G333A -0.149084841319322 S219A-C224A -0.149766263785093 A438A-I445A -0.15161630237252 V322A-W440A -0.153189505906925 G225A-V233A -0.153589454079311 A315A-V322A -0.155349266857739 L223A-I231A -0.156125032601926 L435A-I443A -0.158258730679381 A226A-L235A -0.158762786987072 L223A-R232A -0.161900361713959 I327A-I445A -0.162491517338261 V325A-G333A -0.162897930314048 T316A-V322A -0.164706228915431 I445A-S450A -0.165492137269029 Y437A-I445A -0.165730760222044 L314A-A438A -0.166141935644154 A226A-V233A -0.166803382604193 V321A-I327A -0.167249403515902 L435A-S444A -0.172357379821932 L435A-G442A -0.172748547803697 I443A-S450A -0.173701149604085 L435A-V441A -0.174122116763318 W440A-I445A -0.176193816379157 V441A-L448A -0.177002587093111 F317A-Y437A -0.17720542764434 Y437A-S444A -0.179498764040438 A228A-L235A -0.182718683777841 M436A-G442A -0.184796619808484 A220A-A227A -0.186355821041132 T316A-P323A -0.191596974036258 F434A-V441A -0.193084626789876 A315A-L435A -0.195418009043614 S219A-A226A -0.199993298020447 Y437A-I443A -0.201521699991154 V322A-A329A -0.203307111301132 I327A-G333A -0.207509924044493 A226A-R232A -0.207668534456608 P323A-V330A -0.208240985181683 V325A-V330A -0.208927200009242 I443A-S449A -0.209699808714904 M436A-I445A -0.210107224238872 V318A-P323A -0.211789977534553 M436A-I443A -0.216359001920169 W440A-G446A -0.222976737869124 N229A-L235A -0.226877886029733 A438A-S444A -0.227723587604307 L314A-V322A -0.228388630979258 L435A-W440A -0.230347731505528 V441A-G446A -0.232248884650215 I327A-Y332A -0.232640591458418 L223A-A228A -0.233803632490297 L223A-N229A -0.234788540546947 W440A-L448A -0.236648318401918 F439A-S444A -0.236835441317095 V322A-I328A -0.237853695439094 I328A-G333A -0.239500803353727 V325A-I331A -0.244977869654956 A220A-A226A -0.246938529398907 L319A-A438A -0.249791919063475 V318A-V325A -0.251097464087199 G442A-L448A -0.257198822583952 L223A-A230A -0.257687423610029 V221A-A228A -0.259890832236064 G446A-F451A -0.264992924201702 L319A-P324A -0.265802392616673 F439A-I445A -0.269268035750892 L314A-V321A -0.272033129454263 G225A-I231A -0.27242075468845 L319A-V325A -0.290347591140747 C224A-R232A -0.294907024022931 V318A-L435A -0.296165358460284 A230A-L235A -0.302698100199526 A230A-M236A -0.306612918823522 A438A-I443A -0.309058906998695 A227A-V233A -0.323254231573251 A315A-F434A -0.325310244979597 F317A-V322A -0.330372682703043 A315A-V321A -0.331492669127591 L314A-S320A -0.333268775001732 A228A-V233A -0.335573482572675 F222A-A227A -0.355088459744117 V221A-A227A -0.364103056737678 L314A-F434A -0.365462940979871 M436A-V441A -0.369155065198091 I443A-L448A -0.374490094257531 V322A-I327A -0.39004293927367 A315A-A438A -0.409743479306361 L314A-L319A -0.410175015783531 P324A-A329A -0.415506842342757 L218A-L223A -0.418689832548864 I231A-M236A -0.420799253401119 G442A-G447A -0.424683331685014 L218A-C224A -0.427456667501768 F434A-W440A -0.431882481367571 F434A-F439A -0.44736410835176 V318A-A438A -0.454564871523516 L314A-L435A -0.45533775424703 S444A-S449A -0.455829595714417 G225A-A230A -0.460741003635028 V221A-A226A -0.463655898762299 A226A-I231A -0.479126768521612 A220A-G225A -0.480304463216832 A315A-S320A -0.545229139708447