[Wed Aug 24 17:58:26 2016] >Input file: TM4F4LATD.pdb >TM segments: A71-92_C5-24_C71-92_B71-93_D71-93 MAIDEN score = -60.7314 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I93D-I90A 1.40893318921239 I90D-I93B 0.966640222100544 I93D-L86A 0.810997798483185 V6C-L88C 0.706031279144674 A20C-F77C 0.608703503182372 L86D-F89B 0.518294574990868 L86B-F89C 0.517614263876874 F89A-L86C 0.515336023080951 I92D-N87A 0.479472359399471 F89D-L86A 0.467552785358416 N87B-I92C 0.452595308967709 L13C-T84C 0.399382218259005 V9C-T84C 0.380186932738658 L13C-T81C 0.366162129678193 G5C-A10C 0.339392440960215 I90B-I92C 0.339054176507305 N87B-I92B 0.321696838331464 A10C-L88C 0.309947656324816 V9C-L88C 0.295588307912779 G91A-N87C 0.28652186915608 I78C-F83C 0.28422884469428 G7C-N87C 0.269212704230491 L86B-G91C 0.264694206685727 T82A-T82C 0.246691799312848 V9C-V85C 0.245878412693695 I78D-F83D 0.242806157900558 N87D-F89B 0.236510687923575 T82D-T82B 0.233287399989766 P76C-T81C 0.229663344984553 A21C-F74C 0.227131489009 V16C-I78C 0.226445948105694 P76B-T81B 0.222893879695545 I78A-F83A 0.222097048487472 P76A-T81A 0.217092778202631 V9C-F89C 0.212560826040245 T82B-T82C 0.212475305744904 G91D-I90A 0.210072150271652 F89A-F83C 0.210046600072886 I92A-T82C 0.206045162114874 L86B-N87C 0.203715873550343 V85B-F89C 0.202722230176408 N87A-L86C 0.199973684908552 L88D-N87A 0.199633736362076 P76D-T81D 0.196334799557667 T82B-I92C 0.192316689306218 T82D-I90B 0.184177170670536 T82D-T82A 0.183973995005944 A20C-I78C 0.183508671216926 F83C-F89C 0.179227693429937 V9C-F83C 0.178069323271648 N87A-F83C 0.175241894495493 L86A-N87C 0.174588796097781 T82D-I92B 0.174312056489427 F83D-F89B 0.173881712722004 T82D-T84B 0.173291621361438 F83D-N87B 0.173291242481585 T82B-T84C 0.172541395225071 S8C-G91C 0.172146887182649 M23C-F73C 0.17056327644918 I90D-T82A 0.169304260660535 N87D-F83A 0.168239725594181 N87B-G91C 0.168096946931977 V85D-I93B 0.162647681741667 A10C-F89C 0.16123006346222 N87B-L86C 0.160518198693986 T81A-L86A 0.154867369612495 T14C-T82C 0.152520091770506 I92D-M79A 0.15204872183297 A10C-G91C 0.150726947668308 I90A-T84C 0.149386985342888 T84B-I93B 0.149248513622338 G5C-T14C 0.148192361724041 I90A-I92C 0.148093968242366 G5C-L86C 0.146537009420173 I90B-I90C 0.146161426480894 I93D-I93B 0.143719847402267 A10C-I92C 0.143180104500078 I93D-I90C 0.142336455481543 T84B-F89C 0.140533164959598 F83B-N87C 0.139420769100091 I92D-V85A 0.139087272573848 L12C-L86C 0.135400425622878 I92A-M79C 0.13505080105446 F89A-V85C 0.134383473408896 L86A-G91A 0.134216816777033 N87D-I90B 0.132240980275383 I90D-T84A 0.130822501692391 T84D-I90B 0.129836511353803 T82D-I93B 0.129778431495494 I92D-L80A 0.128346112475782 N87A-N87C 0.128299739587181 A21C-I78C 0.128266835212864 S8C-V85C 0.127161074840306 M79A-N87A 0.126245752254853 Y18C-L80C 0.126015263015647 I78B-F83B 0.125204672081855 M23C-V72C 0.124528147356982 I93D-I92A 0.12418319195784 T82A-I90A 0.123608210376056 G5C-F89C 0.12335150675008 M79B-V6C 0.122842463024401 L88B-I90C 0.122654340420993 S8C-T84C 0.122147033621728 N87B-N87C 0.121719075717807 G5C-I92C 0.121501729314161 A11C-N87C 0.121449218895362 I90D-G91B 0.12080875913029 V85D-F89B 0.119758714729869 G91A-F83C 0.119452892424463 F83B-G91B 0.119328588955658 F83C-G91C 0.118784668659697 N87D-N87B 0.11820799814809 A11C-L88C 0.116485330705707 F17C-T84C 0.115683684040392 I92A-L80C 0.11423733256875 I92D-I90A 0.114015773194417 L13C-L86C 0.113278214054367 G91D-T82A 0.113242458207442 G91D-I90B 0.11161145877527 V6C-V16C 0.110518361136678 I92B-I92C 0.11016278968726 S8C-Y18C 0.110044256575148 V16C-T82C 0.109805286144971 G7C-T84C 0.108853910074779 V9C-N87C 0.10842466886493 G91A-T82C 0.106330957906218 A24C-W71C 0.105826542776239 S8C-N87C 0.103312755041558 N87D-N87A 0.102804911771554 I90D-G91A 0.101498695004622 V85A-G91A 0.101002707937192 I90D-I92C 0.100726593874406 A10C-L80C 0.0972214470903394 G5C-V15C 0.0955046430592603 L80B-A10C 0.0942082396809942 G91D-N87A 0.0938773222270735 A11C-F83C 0.0934202832840341 P76A-T84A 0.0932575942911686 I92D-L86A 0.0930306572762341 V85D-T81A 0.0929220573872591 L86D-V85A 0.0920923412258854 N87D-G91B 0.0920500152981134 L88D-M79A 0.0906517831969615 I93B-I90C 0.0900582175567539 V85D-F83A 0.0899537385093767 M23C-P76C 0.0895870536620051 M23C-I78C 0.0889549956926969 F77A-L86A 0.0875826157712476 G91B-G91C 0.0874991444458724 T82D-I90D 0.0874813255777981 L86C-G91C 0.0869161308582336 L12C-F89C 0.0853860627705043 A21C-T81C 0.0845206311327154 L80D-I93B 0.0843244652908441 I93B-I90A 0.0842597078913996 L86D-F83B 0.0838900246995422 G7C-L88C 0.083553552472424 L13C-Y18C 0.0835156079379873 I90D-I92A 0.083267222342519 A11C-L86C 0.0820264585355472 V15C-T82C 0.0817462339342194 I93D-I92B 0.0814248739194279 M79B-A10C 0.0810520010789229 F89D-L88B 0.0805656503712457 I19C-T81C 0.0803894629020716 I92B-I90C 0.0795514389761631 A10C-I90C 0.0787192432661641 L86B-F89A 0.0781451185456907 F89A-T81C 0.0779993501395473 T81B-V85C 0.0776253994928471 I90B-G91C 0.0775733316237091 G91A-G91C 0.0775672548052311 L88D-L80A 0.0769507760992223 G5C-T84C 0.0764233303910786 G91A-I90C 0.0760000311884435 V85A-T81C 0.0745313636470017 G91D-G91A 0.0741015373930093 A21C-I75C 0.0721950851510886 I93D-T82A 0.071702843060514 M79A-L86A 0.0709569020130116 V85A-T82C 0.0690757378116057 P76D-T84D 0.0688051366843858 V6C-L12C 0.0686631058106677 V85D-L86B 0.0684561181594061 V85D-T82A 0.0682266241580089 I93D-L86C 0.0680480934286358 I90B-V85C 0.0678834119671654 T14C-V85C 0.0678519697806725 L86A-T82C 0.067792938517831 G91D-F89A 0.0674213809076689 F89D-T81A 0.0670619363109308 V6C-T82C 0.0667792277839077 T81B-G91B 0.0666843216773634 T81D-F89B 0.0661822673868819 G91A-L86C 0.066170501131392 T82B-L88C 0.0652383653598054 L88D-F89A 0.0646815115020338 M23C-I75C 0.0643201198734697 F89D-L86B 0.0640255867248616 L86D-F89C 0.0631693267768094 V9C-I92C 0.0625602447916069 M79D-L86B 0.0625481011432605 T82C-I90C 0.0623824720130139 N87D-V85B 0.0610067322992096 I93D-F89B 0.060673913336545 T14C-F77C 0.060646156230872 Y18C-T84C 0.0598701453306822 A10C-L86C 0.0598379714949786 V85A-L86C 0.0593289827215182 L86D-G91B 0.0591061340810333 T82B-L86C 0.0586056656426921 T84D-F83A 0.0580480629608944 I92A-G91C 0.0576286245222665 L88A-T82C 0.0564524372381863 F83A-G91A 0.0562964690728478 T81C-G91C 0.0556168702880031 I19C-F74C 0.0551976819272296 L12C-F77C 0.0548697560692801 I90D-L86C 0.0542259717844131 I90A-G91C 0.0540702985650737 T82B-V85C 0.0536330184670906 M79B-L88C 0.0536035317395682 I75C-T84C 0.0532208855830064 I75A-T84A 0.0531282272297053 I75B-T84B 0.0526950898047329 I75B-T14C 0.0526752772823713 T81A-I90A 0.0526099503265158 V6C-T14C 0.0525690629642117 P76C-T84C 0.0522499645715691 V9C-L86C 0.0520349507171742 F17C-F83C 0.0516657273957897 F89D-I90C 0.051319397074379 F89A-I92C 0.0489568435637242 T14C-I78C 0.048251825855214 S8C-V16C 0.0480357559844857 P76B-T84B 0.0475604526781428 T82D-L88B 0.0463963529904996 M79D-L88B 0.0462137764381922 F89B-L86A 0.0461280744077461 T82B-I90C 0.0456081965286765 V6C-L86C 0.0453594991474731 F83B-A10C 0.0453474927782889 L86B-V85C 0.0449972557691538 L88B-I93B 0.0447105680907054 T14C-N87C 0.0444552924583057 G5C-I90C 0.044305806541713 F89A-G91C 0.0438895333829228 A20C-M79C 0.0436326215625331 A24C-I75C 0.0431962508444457 L86A-L88C 0.0406205332168508 T82D-F83A 0.0404058238716729 F74D-F83D 0.0400533587333136 V15C-T84C 0.0395303674390757 V6C-F83C 0.0383078181757009 G91D-F83A 0.0380301762171014 T84B-I90C 0.0375764096514302 V15C-T81C 0.0370575237202848 L88A-T84C 0.0365314143522202 T84B-L88C 0.0363083283577197 T81D-I90D 0.0362489518126017 I92D-G91A 0.0362415497449109 I78D-V85B 0.0358947998472874 T84D-G91D 0.0357410210031048 N87A-I92A 0.035568575918536 T82A-F83C 0.0343472264622422 T84D-I93D 0.0341794307405228 V85A-I78C 0.0337559073002307 M79B-T14C 0.032759721434471 F83D-T82B 0.0318176930844869 F89D-I92B 0.0311959278049212 I78B-V85C 0.0306462441525834 I75D-T84D 0.0305827285881959 T84D-L88B 0.0300725500884709 L88D-I90A 0.0300677155409854 W71A-L80A 0.0298117577249011 N87C-I92C 0.0295760195098146 T81B-N87B 0.0294891701427584 I92A-N87C 0.0292761563210924 G91D-I92B 0.0291838425406779 I92D-I90C 0.0287028291869502 A11C-G91C 0.0285772361028496 V16C-T81C 0.0284566707875884 L12C-V85C 0.0280795116417805 F89D-F89B 0.0279455949974796 P76B-A10C 0.027941431189535 A11C-T84C 0.0273370527377903 L88D-G91B 0.025899826468001 M79C-F89C 0.0257741962902052 M23C-W71C 0.0257679025321798 F73C-L80C 0.0257156698719223 T82D-V85B 0.0245329897399671 M79B-G7C 0.0242941359732969 G5C-V16C 0.0234294405642195 N87D-I92D 0.0232055969284575 I92D-T81A 0.0228866907568164 L86B-L86A 0.0228174583163492 G7C-I92C 0.0227026710559208 V85A-N87C 0.0209542893285835 I19C-P76C 0.0204298285427496 N87D-I92B 0.0204214536663438 N87B-V85C 0.0203717767708793 F83D-I90B 0.0189326010439305 F89D-I90B 0.0185406886134086 I90D-F83A 0.01811573302004 L13C-F77C 0.0179520622877241 V72D-L80D 0.0179259972845003 A10C-T82C 0.0178699783453755 V9C-T82C 0.0178557970620878 I92D-F89A 0.0178457349976837 T84D-G91B 0.0175779695881273 V9C-Y18C 0.0174831399694506 F73D-L80D 0.0172674310370897 T14C-M23C 0.0172141937718959 L12C-M79C 0.0171496719207545 V85D-I90B 0.0163118616062766 I90A-F83C 0.0163025100732617 L86A-V85C 0.0162355088250816 T81C-N87C 0.0161050018500113 A10C-Y18C 0.0152541615148138 V22C-F77C 0.0150652671610736 A20C-T84C 0.0145784749386419 T81A-N87A 0.0137072406087446 I90A-V85C 0.0136720077372043 V15C-V85C 0.013159858366802 F73D-T82D 0.013146977175774 I90D-L88A 0.012621376842489 L13C-F89C 0.0125396125837978 N87A-F89C 0.0112698507782749 F89D-F83A 0.0109291909215621 L88B-G91C 0.0106641953390785 G91D-G91B 0.0104331034469709 L80B-L88C 0.0100491906822047 V15C-A24C 0.00912048646125108 N87D-I93B 0.00764583538697572 L86D-T82A 0.00675743198708378 W71C-L80C 0.00653762629561516 T82B-I90B 0.00601875654353989 I90D-I90C 0.00592697868934078 L12C-T82C 0.00572814611153927 F73B-L80B 0.00547363719009297 F83B-T82C 0.00524586311365649 F83A-I90A 0.00518651800781877 L86D-T84A 0.00512176897920291 F74D-T82D 0.00507083185764579 F89D-G91A 0.00461894350191372 G91B-F89C 0.00439205310718638 V16C-F73C 0.00388453766695718 F83A-I92A 0.00124196332402082 I93D-N87A 0.00106071408463615 F89B-L86C 0.000791267680646968 V22C-F73C 0.000257187392688429 T82D-G91D 0.000124911399313588 G91B-I90C -0.000420040252726572 F17C-M79C -0.00119949248775963 L86D-L86C -0.00183681365557042 I92A-V85C -0.00206465713309489 L86D-I90B -0.00280250812921334 F73A-L80A -0.00304762853137142 V15C-F77C -0.0031813012349704 L88D-T82A -0.00349358543366751 T84B-G91C -0.00376352431111582 G91D-F89B -0.0039367267391972 T81A-G91A -0.00451620464157143 T81D-V85B -0.00455299774786155 W71B-L80B -0.00496413396345829 N87D-L86A -0.00574309866512479 M79D-N87D -0.00621204503402861 V9C-T81C -0.00663293134516785 A20C-V72C -0.00669136172090079 F73C-T82C -0.00696859630507962 P76C-T82C -0.00763712307349507 T84B-L86C -0.00829801297433042 L12C-T84C -0.00842351504729244 N87B-F89C -0.00848669869443008 M23C-F74C -0.00944858232501075 M23C-F77C -0.0095219930254728 L12C-A20C -0.0100909142052741 F73C-T81C -0.0111550944146672 L86D-M79A -0.0112572237579798 G7C-T14C -0.0115842771438011 I90A-T82C -0.011695530062835 T81C-I90C -0.0117059952435081 T84A-L86C -0.011706234000171 V72C-L80C -0.0119292392347088 V85B-I93B -0.0120664352880961 A11C-V85C -0.0128347873007022 A24C-V72C -0.0133665741447306 I93D-G91A -0.0146170561175794 P76A-T82A -0.0146575936571558 I93D-L88A -0.015070226757476 T81B-I90B -0.0151207029155476 A24C-I78C -0.0157937508767746 P76D-T82D -0.0159350016576781 P76B-T82B -0.0161276415490723 F73B-T81B -0.0161663021695495 V72C-T81C -0.0162034673743836 V6C-G91C -0.0162533852686102 A21C-L80C -0.0166459936802612 A20C-W71C -0.0181255950019887 L13C-G91C -0.0191084641729775 T81D-N87D -0.0194132445479918 V16C-P76C -0.019762204980867 M79B-T82C -0.020016264766225 V85A-M79C -0.0203024914820173 I90B-L86A -0.0204054722170737 A24C-P76C -0.0204939777609399 V15C-M23C -0.0217689236131524 F74C-F83C -0.0218202354609787 A21C-F73C -0.0221267478324165 I90A-L88C 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