[Thu Aug 25 00:32:27 2016] >Input file: TM4G1UCGG.pdb >TM segments: A2-18_B342-406_B410-427_B463-488_B504-520_D872-883_D888-908_D925-948 MAIDEN score = -39.9903 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- BBeads pair Empirical energy ----------- ---------------- Q352B-N357B 10 R902D-L908D 1.34206827907078 I367B-I398B 1.27587580783895 L354B-K504B 1.15605291215124 L354B-Q487B 1.03917709773319 H387B-F392B 1.00415149077622 P362B-I367B 0.975430577509708 L365B-L417B 0.90391536086281 M351B-A360B 0.860506723478228 Q352B-A360B 0.8598386569169 L405B-H410B 0.832855507391655 L364B-L417B 0.818271856079786 I350B-L507B 0.783530340521716 I469B-L514B 0.778495490501717 I350B-S511B 0.71488062523751 L365B-L416B 0.69386435879662 D361B-I367B 0.667264566167761 I402B-L416B 0.659637979493878 A371B-F392B 0.635646894383505 S395B-I513B 0.63409953234323 V375B-A520B 0.630561549331891 A391B-I515B 0.627236084346844 I890D-K897D 0.615277365499143 F392B-A397B 0.606819881936133 R481B-L486B 0.605303512041081 I889D-K897D 0.592474076259199 F392B-I515B 0.587896128240053 L373B-C427B 0.584330691620375 S347B-L514B 0.576980666728262 A343B-I515B 0.574956630462314 K504B-L509B 0.565960473387483 S399B-L508B 0.560066558842703 S406B-G411B 0.548695304179016 L365B-I421B 0.536849308086413 L873D-A895D 0.534300684731162 W925D-L930D 0.533321382527889 V389B-G516B 0.532140738612847 F392B-A512B 0.526953887806082 S368B-S395B 0.52441054811564 V375B-A391B 0.518210319968522 A391B-V519B 0.511431040490429 I367B-S395B 0.511002191653423 R415B-I421B 0.510861503217656 A372B-V519B 0.502425806204211 L364B-I421B 0.495569828053473 F355B-A360B 0.489534986555782 C374B-G394B 0.487808249055282 A371B-I393B 0.485354524317044 M388B-I393B 0.479533380748914 M351B-R356B 0.475928284958998 A929D-R934D 0.472227612822946 S347B-I515B 0.469806245857142 L468B-I513B 0.468024489648135 L365B-I423B 0.466750632571473 L405B-R415B 0.459214158804746 S347B-L510B 0.45865263931065 Q352B-K504B 0.453940608573408 G370B-I398B 0.452851713070857 V464B-A517B 0.451933517228314 L354B-L486B 0.450418178944682 I350B-R506B 0.449544742260395 V375B-S386B 0.448706712974704 G370B-S395B 0.445942019114174 I398B-F403B 0.445348042915261 V346B-S511B 0.439964489624199 P927D-R932D 0.437819967319723 R356B-L486B 0.430528677623697 N875D-K897D 0.42999021814981 G363B-S368B 0.429936101319046 G348B-P362B 0.424690124032704 G366B-I421B 0.421413832505384 G370B-I393B 0.420018481883625 A343B-I469B 0.414792505300388 V346B-C473B 0.409723556164956 F392B-I513B 0.408756271491036 L365B-I398B 0.393922885661983 L468B-A517B 0.392049667298658 I350B-F355B 0.391872676370041 H387B-S395B 0.391248664344997 S369B-I423B 0.388478340937603 R356B-L413B 0.387811650117487 G366B-I398B 0.384330069965063 L903D-L908D 0.383811775421117 P362B-I515B 0.376433955805712 I367B-I515B 0.375468458867355 L344B-P362B 0.367623770643492 C374B-M388B 0.365233036934171 M388B-A517B 0.363622055689697 S395B-G516B 0.362210053191251 L873D-T899D 0.361791485070148 A371B-V519B 0.356714787909663 T899D-L908D 0.354519107746785 A360B-A414B 0.353541524090422 T349B-A360B 0.350874234023469 G370B-A391B 0.349602406625951 L344B-T349B 0.347721033822336 M351B-L507B 0.345218116988615 R415B-G420B 0.342263113421577 R356B-L488B 0.34191135010462 M381B-H387B 0.338351490121322 I378B-S386B 0.337920815306996 I367B-S399B 0.335711108520423 S878D-K897D 0.333608731882382 M351B-L359B 0.333278460036441 G353B-L486B 0.331371647666109 M388B-A520B 0.330836078462888 L364B-A419B 0.329743685919683 F355B-F403B 0.326159988190865 G370B-A425B 0.326061714892063 I469B-I513B 0.323307043737668 L514B-V519B 0.323006235838901 A372B-S386B 0.322495278873183 G366B-A512B 0.322453932574352 G363B-A518B 0.322140955568671 L344B-I515B 0.32211095143383 Q3A-L8A 0.321167879791881 S369B-C427B 0.320519975420625 S347B-K504B 0.319270431460605 G363B-A372B 0.318902874772323 S369B-A518B 0.318874786468555 G366B-A391B 0.318752491853805 S395B-S511B 0.317920930710571 L384B-V389B 0.314077078092682 L373B-A391B 0.311914969729604 G376B-C427B 0.311618742430665 A360B-S406B 0.309064418693903 L468B-L514B 0.30898419691831 I874D-G896D 0.308690706018632 L365B-L418B 0.307627694965706 L359B-L413B 0.307588731824597 S406B-A419B 0.30687432417499 S395B-A520B 0.30583764415547 L475B-R506B 0.301665222071076 A360B-L365B 0.301345768853252 S368B-V519B 0.300791947952328 L396B-L509B 0.300323308454007 S386B-A391B 0.300223790701406 L344B-L514B 0.299911825190423 I890D-A895D 0.299399336418525 V2A-M7A 0.298826196044998 I513B-A518B 0.298685044343331 I874D-T899D 0.298483973415651 I367B-A397B 0.298318701709197 L384B-A520B 0.298157092657763 A391B-I513B 0.298129342097116 L354B-L483B 0.295332499356296 A929D-A935D 0.29511071518323 G906D-A931D 0.294542396586558 L396B-L508B 0.294538979074338 L405B-L416B 0.293910773935116 G353B-Q487B 0.293598413763056 S368B-A391B 0.291403276262341 G394B-A517B 0.291210876120435 N875D-R902D 0.291194524520789 M7A-L12A 0.29099583868716 G348B-G366B 0.290955843696762 S399B-G420B 0.290778820418971 G353B-S406B 0.289826630019909 G348B-L365B 0.287634361442211 P892D-T899D 0.285260709520128 S466B-G516B 0.285091997967038 Y907D-Q926D 0.284091501367741 G363B-S395B 0.280291186454261 L507B-A512B 0.280115120534903 L344B-A518B 0.278690407411042 I469B-A517B 0.27811703160303 L365B-G394B 0.276617672064083 L373B-G516B 0.27592652908216 Q487B-K504B 0.274824192050881 N357B-P362B 0.27444844380177 A465B-A518B 0.273625680249736 L377B-G394B 0.273495393887671 A371B-G516B 0.27246454456962 G363B-G394B 0.272267767628449 G420B-C427B 0.269810940061987 L417B-A422B 0.269266497411268 G394B-A520B 0.264323722745265 L359B-L364B 0.263847824443777 G390B-A518B 0.263847491979416 T472B-L514B 0.263347380669162 M388B-G516B 0.262678171808508 L364B-L416B 0.262521099760132 A397B-G516B 0.261535112776282 A372B-A520B 0.260491131645602 A343B-G476B 0.257882756269268 S347B-A517B 0.257510104850258 G353B-F403B 0.255746823723177 C374B-I393B 0.255141196009453 A345B-G476B 0.254937438632495 G394B-L509B 0.253485518071138 G363B-L416B 0.252701903277838 G376B-Y385B 0.252513063515114 A391B-A517B 0.248871789923825 I350B-R356B 0.248425142025159 G370B-A422B 0.248151760954071 G363B-A422B 0.247681159499065 L364B-S369B 0.247390614995256 T349B-Q487B 0.247220743282388 F10A-L15A 0.24686888705747 L344B-D361B 0.246844920175649 I367B-A372B 0.246818532723449 I367B-G394B 0.245165479068516 L359B-G420B 0.242296559286557 L364B-G370B 0.24157566791125 P362B-L396B 0.240866348284142 T349B-L477B 0.240379823092351 F403B-G411B 0.239972611965566 N875D-G894D 0.239511167622123 R902D-M937D 0.236866626223999 C342B-P471B 0.23648115113445 G366B-I423B 0.236166970459343 I367B-L396B 0.23090036103368 G353B-N412B 0.230853973782139 S347B-P358B 0.229835648305681 S898D-L903D 0.229782435926836 A360B-R415B 0.229580373672752 L354B-P362B 0.228936647537301 N412B-G420B 0.228840376016006 R356B-K504B 0.228147946489508 T349B-P358B 0.227950147288454 V464B-I513B 0.227654722782202 I393B-A512B 0.227433777770639 S898D-G906D 0.225258677619985 G353B-G411B 0.225099735150588 A371B-A520B 0.224019324057977 G394B-L514B 0.223943980938621 N357B-L413B 0.223273418775199 F355B-S406B 0.223172541438962 S395B-I515B 0.222025189442538 G411B-Q487B 0.221346724800533 L873D-G896D 0.220640738960688 P362B-L416B 0.219673555133899 I379B-G390B 0.218237161342267 Q352B-D361B 0.218201835653809 S368B-I515B 0.217900865733504 I367B-G390B 0.215890321895528 L344B-T472B 0.215425131142346 P471B-L507B 0.214767674158963 F355B-Q482B 0.214371543108207 I402B-A419B 0.21415662650073 A360B-S368B 0.213938275334386 S347B-G516B 0.212327135629695 N357B-Q487B 0.211492239686853 C374B-I515B 0.211314779794942 T472B-L508B 0.21047795026298 Q926D-A931D 0.209283114172246 V877D-G896D 0.20796520450476 G353B-S511B 0.207940185138152 S395B-A518B 0.206895142227143 T400B-I513B 0.206370100267373 L405B-N412B 0.204205861023639 D361B-A419B 0.203316358564533 L365B-I402B 0.203109131928568 T472B-L510B 0.202246784645149 S369B-A419B 0.202087691749357 D876D-K897D 0.201865296064517 T349B-N484B 0.200048793911996 S386B-A465B 0.199944517394207 A397B-S511B 0.198348649500391 N357B-L405B 0.197864429383481 G891D-T899D 0.197316126902021 M351B-L485B 0.197266434157993 D361B-G366B 0.196512933798301 A371B-S399B 0.196447194504743 N357B-R415B 0.19581103840749 S368B-H387B 0.19565305330014 N875D-L901D 0.194918093849123 H410B-R415B 0.194540385370561 C473B-L507B 0.194525656373217 M351B-N412B 0.194247982945959 C342B-L468B 0.193685530671068 T905D-W925D 0.193073078651177 A882D-T933D 0.192171808916022 M351B-L417B 0.191578391051101 S369B-A517B 0.191173254245912 W925D-T933D 0.190558933967649 A480B-R506B 0.190307190112533 R356B-G411B 0.189571084788837 G353B-A360B 0.189005749793262 S395B-L508B 0.18881692792478 S878D-S898D 0.187928290966228 Q352B-G411B 0.187778639129343 L382B-G390B 0.187100312061869 L873D-G894D 0.185734904192972 T472B-I513B 0.185593850836517 P471B-G516B 0.185186736155779 L396B-K504B 0.18469111939204 G366B-N424B 0.184663432710521 G353B-D361B 0.184027721359346 C374B-L396B 0.183088066176468 L11A-V16A 0.183080313948745 G476B-N484B 0.182619326715122 G366B-I402B 0.181504839172978 R902D-A935D 0.180153095558918 R5A-F10A 0.17993575950664 G363B-I398B 0.179852722948589 Q352B-S399B 0.179495651854858 W925D-R934D 0.179133199474941 W925D-R932D 0.179129441368095 M351B-L508B 0.17901296450515 G891D-S898D 0.178974481942017 G353B-L413B 0.17887209921912 L354B-G411B 0.178697885702086 S467B-L510B 0.1783538161866 L382B-H387B 0.178154325398699 D876D-R902D 0.178126803668476 G363B-G516B 0.1778692427852 S466B-S511B 0.177527629117008 P892D-L900D 0.177484659114084 I401B-S406B 0.1767132926906 T905D-R934D 0.176459145954238 L475B-K504B 0.176191955653527 G906D-A935D 0.175541309978292 S347B-L508B 0.175305885097957 L900D-T905D 0.175123410274672 T349B-G363B 0.174988364738314 S368B-G394B 0.173835407317477 A872D-K897D 0.173740017959661 G363B-S399B 0.172949700853499 P362B-L508B 0.172934830598087 L365B-N424B 0.172675205930735 C473B-L509B 0.170766768308047 L354B-G476B 0.170705064296952 A343B-S368B 0.169906747734387 M351B-D361B 0.169334909485295 C374B-C427B 0.166795197241965 T400B-L416B 0.166469168274336 G894D-L900D 0.166029087150026 G476B-L514B 0.164674585787406 G394B-A422B 0.164663606793761 G363B-L418B 0.164621395281566 I874D-K897D 0.164583860692441 A360B-G420B 0.164303669779665 A360B-T400B 0.163921831691319 L908D-W925D 0.163743572601962 T349B-I513B 0.163739564165367 S399B-R506B 0.16358429536983 S467B-S511B 0.163485849763649 G906D-V936D 0.162827829863045 R356B-D361B 0.162714619684355 G376B-A517B 0.162402453862018 S347B-L483B 0.16232799718293 L930D-A935D 0.162017584180189 L365B-N412B 0.161935888738357 C374B-H387B 0.161800627179448 D876D-T899D 0.161482899938171 L364B-N424B 0.16125459714003 M351B-Q479B 0.161053942797701 L365B-R415B 0.159877312665394 G394B-I515B 0.159260812176953 S467B-L475B 0.15884963032194 G370B-H387B 0.156515971059765 P362B-L417B 0.156467913047036 C374B-I398B 0.156396075525365 L418B-N424B 0.15617023538068 T400B-G420B 0.156092482564964 I367B-I393B 0.155826413292495 A360B-I367B 0.155685444131999 S347B-P362B 0.15534240863066 M351B-L477B 0.154975249641782 T349B-C473B 0.154230606848493 I393B-A517B 0.154212075396544 H387B-I513B 0.153588962532109 S399B-N412B 0.153443900740033 I421B-L426B 0.151591317082404 T349B-P362B 0.151257715457833 G370B-G420B 0.150840881348943 L373B-G394B 0.150606966662103 R356B-A414B 0.150437419545135 A360B-I515B 0.150293022589787 G348B-A512B 0.150101356919778 I350B-D361B 0.149758322873265 A343B-I367B 0.149547827917116 I13A-L18A 0.149037911203367 S347B-R506B 0.148969321620152 G353B-L483B 0.148366380361676 V380B-H387B 0.148326022226771 A360B-S511B 0.147573162061612 S368B-L373B 0.146751400014574 A372B-A391B 0.146246897875643 Y385B-S467B 0.146121735775844 G370B-A512B 0.145457595387662 T905D-K928D 0.144636737386073 G9A-L14A 0.144446447593691 M351B-S368B 0.144308048525195 G476B-K504B 0.144012497181403 P358B-R415B 0.143921040779844 C342B-I350B 0.143821887453887 G370B-L514B 0.143683420215501 A343B-A517B 0.143064330065975 Q352B-R481B 0.14287827846064 T349B-K504B 0.142190082660834 M351B-G476B 0.141505782829503 L384B-S466B 0.141501110394588 L900D-M937D 0.141309193540141 L8A-I17A 0.14101970601846 Q352B-R506B 0.140849525411531 A343B-V464B 0.140615114274332 G370B-M388B 0.140551728740406 V346B-M351B 0.140288420991976 G376B-L384B 0.139769895853127 C342B-S347B 0.13948048036531 C473B-R481B 0.139221369927421 S347B-L470B 0.138599135618537 G348B-G476B 0.138467858614491 M388B-L510B 0.138446496934206 I474B-L508B 0.138341213307896 S386B-V519B 0.138186309001496 D876D-A895D 0.137662891006209 Y385B-I515B 0.13761823601363 A345B-G363B 0.137614438405409 H387B-A465B 0.137579477111506 I350B-L364B 0.137453058973366 A895D-R902D 0.136408636238 R356B-R481B 0.136243990667192 S467B-G516B 0.136222883274358 M388B-I515B 0.135998774937921 S466B-V519B 0.135852407930049 G906D-T933D 0.135697489764174 S368B-V389B 0.13525663669859 S347B-V519B 0.134849300991545 M388B-L509B 0.134617164861059 N357B-S406B 0.134506172028076 H387B-A397B 0.134478774995455 L478B-L509B 0.134074231638304 T400B-S511B 0.133298686424702 I350B-L508B 0.133126455781956 L344B-I474B 0.132989198893461 A343B-D361B 0.132960596825171 R506B-S511B 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