[Wed Aug 24 17:41:49 2016] >Input file: TM4L6RCGD.pdb >TM segments: A124-145_A156-181_A187-224_A232-253_A275-303_A313-332_A353-373 MAIDEN score = -67.1933 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- BBeads pair Empirical energy ----------- ---------------- C209A-W241A 2.33072054660845 W251A-I275A 2.2904961418895 C209A-E214A 1.2097049212266 L222A-K313A 1.15832095520357 F247A-I275A 1.13050898015224 I160A-E214A 1.07439657564595 K171A-M200A 1.0433361660414 K171A-F199A 0.906584427613312 V248A-I275A 0.832296215327208 L164A-W210A 0.82175405102313 I160A-W210A 0.764129472110392 L181A-C193A 0.758818705800007 Y133A-F360A 0.757195911532477 H330A-D354A 0.744580279403321 N287A-I324A 0.730590061073175 K171A-I204A 0.701890170222365 S136A-L363A 0.677277642753526 L170A-F199A 0.661637358647439 L140A-F165A 0.656750765092649 V367A-L372A 0.656469855486419 L144A-A162A 0.655955625470023 A206A-W241A 0.654762741804157 V248A-L276A 0.6506367779018 Q201A-P244A 0.644571306133579 A243A-V248A 0.642784554157326 L212A-A283A 0.635239997438353 A366A-F371A 0.628080006844149 H219A-L224A 0.616922048546107 A243A-P279A 0.615327873056973 V175A-A196A 0.61036759328938 V198A-A252A 0.58414272044217 Y217A-L222A 0.578041057764406 F165A-G362A 0.577521086265927 Y129A-L355A 0.572277422340963 L137A-A172A 0.569713656843484 Y202A-V248A 0.566597213961719 L135A-L363A 0.565374336875218 V249A-I275A 0.561949127417416 I284A-G328A 0.55431151324785 F247A-F278A 0.53347961359431 L137A-V169A 0.531952724857285 L216A-L221A 0.519965569394088 S167A-I204A 0.517668039809692 V177A-A196A 0.517525284821006 F247A-P279A 0.51523531278983 L135A-F360A 0.514395442102328 F291A-L321A 0.510592394779509 G215A-I290A 0.507946856316607 L137A-F168A 0.501162539119298 L212A-Y217A 0.487975441896017 N163A-W210A 0.487116632422294 L211A-I324A 0.478078056482715 R293A-L298A 0.475345579555391 V131A-S359A 0.472077258361519 P279A-E331A 0.471902781240584 E214A-P325A 0.467817406311298 C209A-H219A 0.462136623578022 V295A-A300A 0.460324568323554 V205A-A243A 0.459505015555015 Y208A-Q361A 0.458634749194596 C209A-E331A 0.456567771908137 S174A-A197A 0.448127081754142 G215A-T320A 0.447845147064585 L326A-E331A 0.443824095397492 I178A-C193A 0.442804648350631 L212A-N287A 0.442574424623238 V177A-C193A 0.440662649271647 P250A-I275A 0.440272908085213 F247A-L276A 0.43852266875707 R277A-L282A 0.429177489393707 S319A-L368A 0.429159080466171 L316A-Y369A 0.421955810842511 Y129A-S358A 0.421761778439383 S167A-Y202A 0.421547099173585 Y129A-S134A 0.421330906417033 L181A-A189A 0.42051117352778 F199A-I204A 0.418548827639123 S319A-Y369A 0.415893014876469 S174A-M200A 0.414169328889474 L368A-N373A 0.405162634452295 R315A-L368A 0.402892541725025 Y133A-S173A 0.399918538251031 T156A-E214A 0.395208266417094 G132A-F356A 0.38986699662156 S136A-V169A 0.387594151113176 Q201A-L276A 0.387203969979328 Y133A-S358A 0.385367943186173 V367A-N373A 0.38283133447756 K318A-N373A 0.379442036091654 A172A-A197A 0.378627104371893 L211A-A283A 0.378486088746189 A139A-A166A 0.377982722621583 V131A-S136A 0.375628098996232 I160A-V213A 0.372691630228087 M200A-W251A 0.368379572544745 D179A-C193A 0.367882241739075 S124A-Y129A 0.365860682747093 T320A-C370A 0.363066097504355 K171A-L176A 0.362267486207524 S136A-S359A 0.361913029268776 L140A-A366A 0.358549365453498 K313A-C370A 0.356851795396878 L364A-Y369A 0.355651020302026 G215A-Y236A 0.355399872459351 P325A-H330A 0.354272053086108 S134A-A172A 0.352796376434978 Y202A-M245A 0.350208572316046 D187A-R194A 0.350192468758244 Q201A-P279A 0.350020811400162 C209A-R277A 0.349889050748013 Y133A-Q361A 0.346161027461634 R157A-N373A 0.344995145923755 N207A-P244A 0.343351098121494 L218A-K313A 0.343089604470909 A172A-S359A 0.342373170413602 W241A-P279A 0.341650480854697 Y129A-G180A 0.341234452987259 R315A-L372A 0.341003018554448 V213A-L218A 0.340490146797904 E214A-C370A 0.340444544451507 Q201A-V248A 0.339595148883185 S136A-F360A 0.336103619812537 N207A-R277A 0.336048319155235 F278A-E331A 0.334476960789479 K171A-Y202A 0.331446460622477 P279A-N287A 0.327577205579083 N287A-P325A 0.325954313986248 S136A-A172A 0.324716145850118 Y208A-G238A 0.321472907177883 G215A-F291A 0.321067794805906 A139A-A172A 0.319387204640539 H161A-A166A 0.317814097915752 L140A-V169A 0.317165684804906 E214A-T322A 0.317160485617041 L164A-A206A 0.314191277339376 N207A-P325A 0.312038342806028 V205A-P279A 0.311185676659287 V195A-M245A 0.310132159311891 E214A-L316A 0.308752960366141 Y217A-R315A 0.307631731753029 H161A-G240A 0.307407751795085 S136A-A166A 0.306500359524271 S174A-F199A 0.305481232211657 F168A-G362A 0.304481677712904 C193A-V253A 0.3030482837727 A139A-G362A 0.301098995434106 F168A-I204A 0.300835136501025 T130A-S359A 0.300702123950806 G203A-G240A 0.300168699080339 P244A-V249A 0.299877154902686 V205A-L276A 0.299449758012044 C209A-F233A 0.299289604448754 G132A-S173A 0.299201292289053 L323A-G328A 0.297962294282204 Y236A-P244A 0.296553725309616 Y208A-V248A 0.296223005892072 E214A-L323A 0.295839020507318 Y217A-R293A 0.295715242864936 G138A-S173A 0.294926556882124 E331A-Q361A 0.29426815603817 R157A-Y236A 0.29404061545706 R194A-Y202A 0.291517429694857 V127A-G132A 0.28783061825669 L140A-G362A 0.286961878025522 L140A-A145A 0.28657452166166 N207A-G242A 0.286377860351615 Q201A-A206A 0.286260799030061 L164A-G240A 0.285363048047855 N163A-G362A 0.284121186359901 L170A-M200A 0.283727886063298 G215A-L285A 0.28305696738999 L282A-G328A 0.283044176678132 F168A-G203A 0.281697874892324 K171A-C209A 0.281055623123136 A166A-A366A 0.280851720595717 L323A-G362A 0.279585873467615 G138A-L364A 0.277232097254741 L137A-L363A 0.27701505086888 C209A-A283A 0.274604601906302 A143A-A159A 0.273606621151975 F314A-C370A 0.270945339795698 L327A-G362A 0.270909619542309 A166A-G238A 0.270340674632569 L164A-G238A 0.27022220758652 I324A-V329A 0.268585808419304 L181A-V190A 0.266484325285613 A139A-K171A 0.26588548868291 S319A-N373A 0.263299394407791 L176A-G192A 0.262931746245804 L142A-G362A 0.262172272667734 H161A-G215A 0.260653427524306 T322A-L327A 0.26040527855627 W210A-G240A 0.259716251879794 Y208A-H330A 0.259258572872341 V329A-D354A 0.258812497315766 F168A-N207A 0.256667806612301 G215A-N287A 0.256630257791269 E214A-F289A 0.255084427358684 R157A-Y217A 0.254085818485292 C209A-F288A 0.253352158785404 Q201A-P250A 0.252952572162164 R315A-Y369A 0.252554975832832 W210A-P279A 0.251806452010254 G203A-Q361A 0.250960214623242 I204A-P244A 0.250932295593724 G138A-F360A 0.247191297343224 Y208A-I284A 0.246842967300353 V127A-D354A 0.246314914315048 Q126A-S134A 0.245266165127783 L140A-L363A 0.244730338432338 R157A-N220A 0.244080900436875 Q201A-G242A 0.24407883452972 W210A-W241A 0.242942438523317 H161A-L212A 0.242634461837335 K313A-N373A 0.241827272604667 F168A-Q361A 0.241577980238024 G203A-A243A 0.240704135536423 L170A-G203A 0.238582902222921 T320A-P325A 0.238464605918363 H330A-S359A 0.235588336747362 M128A-F356A 0.234323731822618 V365A-C370A 0.234006825096387 Q201A-N207A 0.233031259373481 R157A-E214A 0.22925129199841 L135A-G362A 0.229090679598436 R293A-A317A 0.227933183260969 F288A-Q296A 0.227533955010327 I160A-L237A 0.227104365272266 D187A-G192A 0.226149309980904 N207A-G215A 0.225791258381036 C209A-I275A 0.225510799970115 V280A-E331A 0.22531282092573 G223A-I294A 0.225069130050391 H161A-Y236A 0.224952354559318 V169A-G203A 0.223520709839905 V190A-V195A 0.222890363755081 K313A-Y369A 0.22288784710365 V205A-I284A 0.222766802771777 G180A-A196A 0.222538075984994 G132A-L176A 0.220432047319432 W210A-G242A 0.219773484286056 Y208A-V213A 0.219505340157864 T322A-H330A 0.219125764234252 G328A-L357A 0.219117408645934 Y129A-F356A 0.219104624164663 Y208A-F288A 0.219001468683428 I178A-V198A 0.218637114688896 H161A-T320A 0.218614440967948 H161A-W241A 0.218133144923434 V131A-G362A 0.21791113183133 S134A-A366A 0.217754983640535 S359A-A366A 0.217682246703672 P325A-L364A 0.217153206663179 A166A-S174A 0.217104701093424 D179A-V195A 0.216845716908756 A139A-Y369A 0.216273412329679 G203A-G362A 0.216211463277976 G138A-V365A 0.215416771865717 K318A-L368A 0.215183056755068 Q361A-Y369A 0.214594848630355 S234A-I239A 0.213677028954475 G240A-F247A 0.213101908645243 N163A-G242A 0.211911413621567 M245A-R277A 0.209666383506082 S167A-V365A 0.209034671604469 V131A-L137A 0.208156863597905 I324A-V332A 0.207798928260217 V175A-G180A 0.206725073844687 S134A-A139A 0.206706557534011 A243A-F281A 0.206522659483623 K171A-Q201A 0.206445425023783 G328A-S358A 0.205055434790698 W251A-P279A 0.204632987088821 H219A-L298A 0.203635550542514 L285A-P325A 0.201658246913178 A243A-R277A 0.201302178439021 V248A-V253A 0.201236526947243 N163A-Y236A 0.201021269215286 V295A-F314A 0.200526805282572 G132A-L364A 0.199882989805834 N220A-Y236A 0.199821668436036 L137A-G362A 0.19955372400281 F356A-G362A 0.199472218559854 Y208A-V365A 0.199462059217957 F360A-V367A 0.199260808481779 M200A-V253A 0.198638200003389 N220A-R293A 0.197934319076177 A145A-F165A 0.197299816860293 G215A-I294A 0.196406785132713 L164A-P244A 0.196404776177822 T320A-L364A 0.196245923078526 C209A-P244A 0.195307867820492 S173A-V195A 0.195027181649688 A172A-D179A 0.194325689145129 I160A-W241A 0.194220709980227 I284A-T320A 0.193597503068834 A162A-E214A 0.193115872038199 T130A-L357A 0.192937519447876 L170A-Y202A 0.19210379208629 I160A-C370A 0.191267948943787 A159A-S167A 0.190718381475328 N163A-Y369A 0.188954490908886 H219A-L316A 0.187568134551202 S167A-P279A 0.186945743022992 H219A-R293A 0.186837452228271 G223A-F291A 0.18673016316635 S359A-V365A 0.186281452091686 Y129A-K171A 0.185605896457937 H219A-T320A 0.185565792185053 L218A-L224A 0.185408430615813 S124A-S359A 0.184978093098884 Y208A-A283A 0.184730717811204 Q126A-V131A 0.184721942353921 N158A-S319A 0.18383897309866 F247A-V253A 0.183385970113351 N207A-L326A 0.183279157143623 Y133A-S167A 0.18323952478202 L222A-K301A 0.182920509950643 D179A-A196A 0.182455397387926 V205A-L211A 0.181972503463842 L211A-N287A 0.181081821775842 K171A-L355A 0.180769164082263 R157A-W210A 0.180336680683305 G203A-L246A 0.179178455311388 L224A-K301A 0.178903955253613 G240A-A283A 0.17871278202318 R157A-A162A 0.178587985518678 I204A-A243A 0.178422505966785 L326A-G362A 0.178372008119751 G242A-L276A 0.178334982012953 V213A-L237A 0.178218411164432 L140A-S359A 0.177002324715004 L364A-N373A 0.176920920812587 N158A-F233A 0.176810304988677 S136A-Q361A 0.176459185007378 V249A-L276A 0.176066350546567 N220A-L297A 0.175651333726019 P250A-R277A 0.174690252312524 A317A-I324A 0.174173076812418 I290A-T322A 0.173888289503254 I284A-T322A 0.173574255360278 V169A-S174A 0.173263800246043 K318A-L364A 0.173070567506381 Y217A-S234A 0.172543398461341 S319A-L363A 0.171893778830616 L144A-N158A 0.171597503071956 F288A-H330A 0.171501764492187 C193A-G203A 0.171263446739171 L141A-C370A 0.170955883451611 A159A-Y236A 0.169690946951946 W210A-I284A 0.169517260357713 H161A-N207A 0.169430113202141 Y217A-G240A 0.168106712840762 L216A-I290A 0.167128811545893 E214A-L321A 0.167109859219373 A189A-A196A 0.166638969299207 I204A-L276A 0.165829232275649 I284A-H330A 0.165787689912937 L211A-T322A 0.165329175142666 A145A-G362A 0.165199710119464 V213A-A317A 0.165166558930621 G242A-A252A 0.164628477222892 G192A-M200A 0.164171249069961 C209A-L285A 0.163173385462407 V175A-R194A 0.162832300359034 Y208A-Y236A 0.162035600224696 M200A-D354A 0.161839325980207 I178A-A191A 0.161448906521512 P325A-L357A 0.161320104396907 P244A-L282A 0.161269414194771 Y133A-K171A 0.158572408046459 E214A-G240A 0.158457599871154 G223A-A300A 0.158212071610862 N207A-F360A 0.158128239275864 H161A-W210A 0.158097929693652 G223A-L297A 0.15771474159106 M245A-L282A 0.157607875311496 T130A-G362A 0.156912371701022 V205A-V248A 0.156168302968402 G138A-A166A 0.156074579066074 G132A-K171A 0.155540333809879 K318A-L326A 0.155276521938734 V280A-V332A 0.155192791653503 L135A-Q361A 0.155107965601047 L144A-S167A 0.154345481079225 A197A-V205A 0.154202746642839 N163A-I239A 0.153680746341544 G203A-V280A 0.152741409110865 N158A-S167A 0.152506141217042 E331A-D354A 0.152040157041273 R293A-K301A 0.15190468582479 Y236A-A243A 0.151569996305307 F165A-S359A 0.151379481743536 L316A-T322A 0.151063709909 F165A-F199A 0.150681721551875 I204A-A252A 0.150158972443813 Y202A-Y208A 0.150057856801424 Y133A-D179A 0.150015358904936 A143A-R157A 0.149681729773114 T156A-G238A 0.149564437965537 I160A-N207A 0.149522281362315 Q126A-S358A 0.149397037397462 G215A-G240A 0.149366081307871 A252A-I275A 0.149224778021346 Y133A-V365A 0.149210193939234 A162A-G238A 0.148862541572834 L216A-K313A 0.148678262765165 S173A-F360A 0.147844654819427 G328A-Q361A 0.146493983775404 I204A-I284A 0.146339592292789 S134A-F165A 0.145437871496502 N158A-F371A 0.145326626657224 A252A-R277A 0.144697119214576 L211A-G238A 0.144684033022865 A139A-L363A 0.143991086342843 W210A-Y236A 0.143936924495438 V365A-L372A 0.143132377091966 L141A-S173A 0.141796204148066 N220A-N287A 0.141442734503281 Y208A-I275A 0.141411519070521 Y217A-I324A 0.141293937788237 W210A-T320A 0.141165947206711 I178A-R194A 0.140547304380565 W210A-P244A 0.140448811100879 A145A-A366A 0.140287425903681 H161A-L368A 0.139863062348242 S134A-L364A 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