[Wed Aug 24 17:20:16 2016] >Input file: TM4NTXATD.pdb >TM segments: A427-453 MAIDEN score = -6.6367 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- M438A-A444A 0.74891879271331 G435A-I446A 0.450826674855715 G439A-S445A 0.4370405337588 G435A-S445A 0.434667541773444 A444A-V449A 0.394463940978882 G432A-S445A 0.275238173336929 M438A-G443A 0.26970400041921 G429A-Q437A 0.250062778679605 M438A-S445A 0.243621685157519 D433A-G439A 0.237545720760544 A428A-D433A 0.223747195099913 M438A-L450A 0.202933166051344 G435A-L447A 0.192743786209176 G436A-T448A 0.190342236757391 L431A-G439A 0.178845457185892 I434A-G439A 0.178779278618439 G435A-L450A 0.178424713851057 G435A-A444A 0.155710356444305 S445A-F453A 0.137212901436137 A428A-G435A 0.132654946385808 I442A-L452A 0.131990868216969 G439A-L447A 0.124368126503052 M438A-I446A 0.117935532164347 I434A-I446A 0.114553800861902 G432A-G439A 0.111315422515325 G432A-A444A 0.106223644369631 G443A-E451A 0.102808269527535 D433A-M438A 0.0999690754468654 G432A-G443A 0.0975952663149453 I434A-V449A 0.090054693957194 D433A-S445A 0.0808580557818901 G435A-T448A 0.0763257150173908 L431A-S445A 0.0706951811515393 G436A-L447A 0.0696029245415026 I434A-L447A 0.0690763773896914 L440A-L447A 0.0660291034478995 Q437A-V449A 0.0659400380671852 A428A-I446A 0.0627650383161376 L440A-I446A 0.0604508460934277 I442A-L450A 0.0577222392347547 F441A-T448A 0.0526146037544706 G436A-V449A 0.0424426124982862 G443A-L452A 0.0323427950403756 G443A-L450A 0.029810867789887 M438A-E451A 0.0221493382520097 G439A-I446A 0.0181475876143011 Q437A-T448A 0.0174918997658895 L431A-A444A 0.0174132836786711 L430A-G439A 0.0134301827591532 I442A-V449A 0.0109867159884462 G432A-L440A 0.0106759767502291 G435A-E451A 0.00415240122600924 Q437A-A444A 0.00371170450248925 I434A-G443A -0.00758953448924515 I446A-F453A -0.0144261651216011 I434A-T448A -0.0165876824474029 Q437A-I446A -0.0190862969953316 G439A-V449A -0.019155301141728 A428A-G436A -0.0261162648069186 S445A-L452A -0.0282306109706258 S445A-E451A -0.0320263162587882 D433A-I442A -0.0356233332423044 F441A-V449A -0.0364350596159246 L440A-T448A -0.0373645383432901 Q437A-S445A -0.0382725479255427 V427A-G435A -0.0419000983856233 L430A-M438A -0.0480762644685351 L431A-I446A -0.0507129235414375 G432A-F441A -0.0517172611735783 A444A-F453A -0.0534794866636314 D433A-I446A -0.0546965542255435 M438A-L447A -0.0602436864806832 G439A-E451A -0.0605689943773693 G436A-G443A -0.0619796040326781 G432A-L447A -0.0675887157575801 L431A-V449A -0.0691054530372517 V427A-G436A -0.070049656845363 I442A-L447A -0.0755342291711392 G432A-V449A -0.0771182614116395 D433A-A444A -0.0815934035180186 G436A-F441A -0.0889494323470341 G439A-L450A -0.0924491286869218 A428A-Q437A -0.0927157647633727 M438A-L452A -0.0941746465711564 Q437A-L447A -0.0958624271668006 D433A-F441A -0.0967166368898207 F441A-I446A -0.0993123986508717 G435A-G443A -0.106235180003561 L431A-L440A -0.109615129329656 L440A-V449A -0.110080005173517 D433A-G443A -0.111185148130497 G435A-F441A -0.113271732378492 L447A-F453A -0.122637281405365 G429A-G436A -0.129248371882992 G439A-A444A -0.134432253974171 I434A-A444A -0.137329016210267 G443A-V449A -0.137390712793616 L430A-Q437A -0.144892587769379 L447A-L452A -0.157923000681444 A444A-L452A -0.159697026386585 G432A-M438A -0.160223487949083 I442A-E451A -0.162262807897385 A444A-L450A -0.165126747139601 L430A-G435A -0.171022603081679 G429A-M438A -0.171559855522012 T448A-F453A -0.171942157404096 G435A-V449A -0.172339998208435 I434A-S445A -0.173090346489661 G429A-G435A -0.174200239594114 A444A-E451A -0.188528389610519 G436A-I442A -0.188630470634614 G432A-Q437A -0.189877545321265 G435A-L440A -0.195780011791994 G429A-I434A -0.19684683126812 V427A-I434A -0.200055298502842 I434A-F441A -0.201772764740128 I446A-E451A -0.206069145457392 G436A-I446A -0.211331065354582 I434A-I442A -0.215394529119485 Q437A-G443A -0.231257839837601 S445A-L450A -0.238466323041758 G439A-T448A -0.240950602151252 G443A-T448A -0.243863942632621 V427A-G432A -0.244025335523667 G435A-I442A -0.248209492160862 G436A-S445A -0.260716529988483 L431A-M438A -0.279273924627359 V427A-D433A -0.28304214063433 D433A-L440A -0.286174522394402 A428A-I434A -0.292440513017111 G432A-I446A -0.294573366917129 I446A-L452A -0.299941391176731 M438A-T448A -0.301800001685401 L431A-G436A -0.315235181733915 Q437A-I442A -0.323269796354118 L440A-S445A -0.334933206315092 L430A-G436A -0.349053331234705 M438A-V449A -0.35954392905684 I434A-L440A -0.360653607243041 I442A-T448A -0.393024470271277 G436A-A444A -0.417993259622454 L431A-Q437A -0.517922171252748