[Thu Aug 25 00:08:36 2016] >Input file: TM4OJ2CGG.pdb >TM segments: X32-52_X58-100_X129-143_X156-172_X204-221 MAIDEN score = -41.8211 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- BBeads pair Empirical energy ----------- ---------------- L131X-P204X 1.71632897778613 C71X-V77X 1.45447013632798 I48X-I160X 0.898103346876566 F44X-V164X 0.736491117074553 P65X-P204X 0.735750991079019 L38X-H168X 0.729556934246617 L131X-V206X 0.725432807206997 N64X-V86X 0.701291843196554 G45X-I160X 0.685006783350562 F44X-A165X 0.676848579993873 L135X-L210X 0.675620029929618 A41X-L166X 0.673565398683133 V129X-G171X 0.668913254587878 P65X-Q89X 0.654318621707687 L72X-V77X 0.648006106706839 A66X-V206X 0.643925073546182 E130X-V206X 0.642162964078735 L133X-P204X 0.623964531280806 A41X-L169X 0.600975981412811 L139X-Y215X 0.597760892309929 V73X-I209X 0.578949237749669 I40X-H168X 0.577646245919961 L51X-A157X 0.557154181268053 V69X-I209X 0.553416083316029 N64X-Q89X 0.540288495056112 G74X-S212X 0.536316221262863 I63X-Q89X 0.515245765206171 C71X-C140X 0.514847758190313 H62X-T68X 0.513045085405136 L135X-P204X 0.507258445710266 L46X-F162X 0.504490785006626 F142X-Y215X 0.497329951493892 V77X-A82X 0.495427920477602 V69X-A82X 0.484717541295404 A41X-V164X 0.480492950991855 M42X-A165X 0.480136905850553 G45X-S163X 0.47886748028469 L135X-I209X 0.477319778858303 L137X-I160X 0.476898375384375 V37X-L169X 0.463397221466603 L139X-S212X 0.458304580055681 L213X-V218X 0.45781835778889 P35X-I40X 0.456075920327927 V138X-A143X 0.455217022354081 L38X-L169X 0.454847202291754 V69X-G74X 0.453667652854996 A70X-V138X 0.448096022316526 R81X-V86X 0.446562781882397 I141X-P156X 0.445314719016037 H76X-N216X 0.44287860294274 L214X-F220X 0.432000027375269 L214X-L219X 0.430779316935382 Y85X-L90X 0.426845116245286 H62X-H76X 0.421566612794123 L135X-C140X 0.413995225089101 V86X-L91X 0.400233016796568 H62X-Q89X 0.399449218254931 Q39X-H168X 0.399365493038012 V67X-L72X 0.38638875403472 I141X-I160X 0.385370040394204 L213X-L219X 0.382116437760635 L135X-V206X 0.379027171203249 A61X-A66X 0.376312007773312 N64X-Y85X 0.376263510260392 Q136X-G211X 0.374674263533361 L133X-V164X 0.371126368522618 V67X-L205X 0.369209172293948 L51X-A61X 0.358451867712752 C140X-F220X 0.356827745458108 I48X-A157X 0.356499520661703 L131X-A208X 0.355403129699312 V138X-Y217X 0.354989392406634 S36X-A41X 0.346132432371444 V69X-Y215X 0.34334123653757 A143X-A157X 0.342488105983555 P65X-A70X 0.340459903148286 F44X-G161X 0.331726280943471 Q136X-S163X 0.331262845839005 L158X-S163X 0.329915683881344 L137X-V164X 0.326782933746579 A43X-G167X 0.324217995341459 C140X-I160X 0.323401064109537 S212X-Y217X 0.32240613276924 L38X-A165X 0.317997469689791 L131X-L205X 0.3164148138392 Q89X-V94X 0.315055644139084 M42X-V52X 0.314847220256935 L80X-Y85X 0.309238166124622 L38X-A43X 0.308442570587666 L72X-S78X 0.307994435033491 V67X-Y215X 0.307598674707675 L72X-V79X 0.304980064219303 L133X-G207X 0.302822839095347 C75X-V138X 0.301347547181285 I48X-A61X 0.299294987095847 L90X-A95X 0.298481995544068 A61X-G161X 0.295762653255556 A66X-I209X 0.294100550467757 A70X-L210X 0.287953899955919 G49X-P156X 0.285360726038164 L137X-A208X 0.284077439293634 M42X-I48X 0.28125574601972 A70X-L205X 0.279710902966485 P204X-I209X 0.278231998867784 P65X-S78X 0.276686811696742 C140X-N216X 0.275409719012987 I48X-L158X 0.274477327442197 G45X-H62X 0.27419061964469 N64X-V69X 0.274007669540599 G49X-I160X 0.27073186352383 L210X-Y215X 0.266574827758795 A88X-A93X 0.262380817547816 A43X-S163X 0.255529604682886 V138X-S212X 0.255144461800137 V73X-L213X 0.254848347684857 V69X-L205X 0.25422303679566 Q136X-G207X 0.250150835744696 G74X-L213X 0.250083588513532 L139X-P156X 0.249107217940958 Q39X-G161X 0.247919892521757 H76X-Y85X 0.247281992878886 L131X-Q136X 0.246933002284278 V67X-V138X 0.244339851802342 F132X-P204X 0.24355051893728 L38X-G171X 0.241046943296443 S59X-N64X 0.2407628914984 A70X-I209X 0.23660849254872 C140X-P156X 0.233012080246805 Y215X-F220X 0.231890600861875 F44X-A157X 0.231651957120118 L210X-N216X 0.229194633669489 L139X-P204X 0.227882095176263 G167X-I172X 0.226082061878501 L46X-L158X 0.223766305584491 A41X-L46X 0.223137137587753 A143X-G211X 0.221797632879996 H62X-T134X 0.219933667082063 Q136X-A208X 0.219352537293338 V69X-V206X 0.216153203697403 M42X-G47X 0.209639276435558 C71X-S212X 0.209233895233094 G47X-S159X 0.208338246144636 M42X-F162X 0.20650534395703 G74X-V138X 0.203604922514292 Y85X-A93X 0.202714042748034 C75X-P221X 0.202357206967712 M42X-L51X 0.202058315285498 L137X-S163X 0.20078564611312 G47X-I160X 0.200513362476674 V67X-R81X 0.200466692280051 C140X-S159X 0.198210874039208 N64X-L135X 0.197506645654219 I63X-C71X 0.195571689474881 S163X-G171X 0.195519796959553 H76X-R81X 0.194822664260652 A143X-F220X 0.1948165650828 A61X-S159X 0.194722684530896 A66X-L205X 0.194197619668199 V73X-G207X 0.191375470824809 I160X-A165X 0.190383540949712 V52X-P156X 0.190054441337031 N64X-G207X 0.189991553282716 L137X-P156X 0.187997006696216 F142X-A208X 0.187219863056742 F84X-Q89X 0.184981077483894 C71X-L205X 0.184748102862623 F84X-G92X 0.184086326369081 G45X-G60X 0.18376350079809 E130X-L135X 0.182255471332782 H62X-V164X 0.182052790206951 L158X-V164X 0.181324627654219 M42X-G171X 0.179967905581671 N64X-L90X 0.179247487965807 G47X-N64X 0.179095866464844 S59X-P65X 0.178127513574489 T134X-L139X 0.177573351809318 L133X-C140X 0.177330980208201 G211X-F220X 0.176593014666137 L72X-A82X 0.176326575935065 N64X-R81X 0.176196960742102 G47X-H62X 0.175953652785412 G45X-L158X 0.173975243850075 V138X-G161X 0.173814508817509 H62X-V77X 0.173701599943347 A41X-I48X 0.172127979948669 G60X-A82X 0.172076635686182 H62X-P156X 0.172076451454942 A41X-A165X 0.170332341538896 A41X-S159X 0.17019324802041 V52X-V164X 0.169719498613833 G74X-N216X 0.169370546105791 Q39X-G171X 0.169360462707973 G45X-L169X 0.169146052508111 V206X-G211X 0.16897156431137 I141X-A208X 0.168807553521798 S159X-V164X 0.168613742705182 H76X-Y215X 0.167800696536583 C71X-F220X 0.167404250836172 V94X-L99X 0.167350762588846 V77X-V86X 0.166534972667102 C71X-L80X 0.165843263059504 V129X-V164X 0.1656352164707 G60X-C71X 0.165512899529748 A82X-G92X 0.165163173014965 C71X-L139X 0.165148866219408 V69X-A208X 0.16292512584927 L133X-L166X 0.161837655887962 G49X-L137X 0.160278845548054 N64X-E130X 0.157556247360389 A61X-V77X 0.156960542571754 Y85X-V94X 0.156225742325842 P65X-V86X 0.15602627507008 V138X-A157X 0.155203954419255 C140X-L214X 0.154298544476421 G60X-V77X 0.153518030111364 C140X-G167X 0.152732828275164 P35X-G171X 0.152473227481886 L139X-G211X 0.151773084699309 H62X-G92X 0.150994528058463 F142X-A157X 0.150578392681674 T68X-L205X 0.149840626582388 F132X-V164X 0.149639559495863 H76X-C140X 0.149086448853073 P65X-L205X 0.148979521837505 C71X-S78X 0.148701687403619 Q39X-G47X 0.146091435018113 A66X-H76X 0.144473524666967 G74X-L219X 0.144153008908994 S59X-V67X 0.14383000606361 H76X-V138X 0.143765394294108 G47X-S163X 0.143340271179502 H62X-C75X 0.14321578047225 A66X-G207X 0.143162140097927 V73X-V218X 0.142968566367533 S212X-V218X 0.14296610871466 Q39X-G167X 0.142339146392757 V67X-V73X 0.142302684827971 I141X-V164X 0.141971870061742 A66X-G167X 0.141617199408406 Q136X-L166X 0.141233059927322 V37X-I172X 0.140004448286396 H62X-V67X 0.139485588814939 H62X-A143X 0.139119745845673 H76X-G211X 0.138043556900229 I48X-N64X 0.137874901613197 I63X-Y85X 0.137751118336616 A66X-R81X 0.137718586612806 G74X-G207X 0.136820334996178 A208X-Y215X 0.136527897707431 H76X-A83X 0.135635755066162 I63X-A157X 0.135228889212308 S59X-H76X 0.135114969993043 A70X-G211X 0.134745190562411 A33X-I40X 0.134712004856248 H62X-A93X 0.134118530654729 G60X-C75X 0.133528460687874 L72X-Y217X 0.13345013743276 I40X-G161X 0.133357341071301 A88X-A97X 0.133242814545553 G74X-V79X 0.133124265371615 A43X-A157X 0.132596756181137 S163X-P204X 0.132376192257547 V67X-S78X 0.132240860705339 T50X-F162X 0.130672630532508 A70X-V86X 0.130511644935937 A70X-R81X 0.130081131575159 A70X-Y85X 0.12998382060631 A70X-Y217X 0.129879336465037 V129X-L205X 0.128730136086074 L46X-G167X 0.126977647524354 T50X-I58X 0.126781201937773 M42X-H168X 0.126575620775548 I40X-G45X 0.12624278530075 L135X-L219X 0.124838957438628 M42X-V164X 0.123732161693564 I141X-G207X 0.123205613162996 I48X-G167X 0.122566858299288 A66X-V77X 0.121816146920785 T50X-H62X 0.121206837705452 T134X-V206X 0.12115525055708 V164X-P204X 0.120930758744939 S59X-L80X 0.12060221395401 L139X-L166X 0.120568731584478 Q136X-I160X 0.120520128478335 A143X-L214X 0.120400050469641 L139X-L158X 0.12036628951357 L131X-L213X 0.119968087871259 L46X-V52X 0.119952751489015 A66X-S163X 0.11964985805501 L135X-A208X 0.119517286892405 V73X-P221X 0.116389849623757 V67X-A87X 0.116212386071147 I209X-L214X 0.116123182249115 A66X-L80X 0.11591036523957 G60X-A143X 0.11548544276307 Q39X-F162X 0.115258822362106 T50X-S163X 0.114872783617065 A143X-S163X 0.11463589928148 A61X-F142X 0.114513219416554 V52X-H62X 0.113954546727088 A143X-S212X 0.113750690307931 G167X-G207X 0.113279799163422 L137X-S159X 0.11319299086766 V138X-I160X 0.113163033983852 L137X-L158X 0.112942365188662 L137X-L205X 0.112905402597671 T68X-V77X 0.112002347879264 S78X-S212X 0.111707458569173 A43X-L166X 0.111003289188765 Q136X-P156X 0.110798089665224 T50X-S59X 0.110633342185479 C140X-I209X 0.110123590323187 S78X-V86X 0.109684803644043 P204X-S212X 0.108841994621267 G60X-V86X 0.108706947167066 S59X-A83X 0.108535852735858 L51X-S159X 0.108193250097982 T134X-G161X 0.106469622631132 P65X-G207X 0.106464968087137 A61X-R81X 0.105912850960695 A208X-N216X 0.105471241687998 L133X-G167X 0.104595647804421 V52X-T68X 0.104511900345573 G60X-F84X 0.10327614745508 V69X-L139X 0.103177926987416 F44X-N64X 0.103063750484558 L46X-L166X 0.102492889479672 L131X-L170X 0.102395680904834 V73X-S212X 0.102171571470314 T134X-A165X 0.102170900956444 A208X-V218X 0.101984520522672 V129X-L210X 0.101893118476409 L139X-V206X 0.101808213594132 A41X-F162X 0.101550884999662 P35X-A165X 0.101525716172506 L137X-L219X 0.101308084734558 T68X-G207X 0.101211969582792 G47X-G60X 0.101086010476812 T68X-G211X 0.101025924466234 T50X-G60X 0.100571138337268 V52X-I58X 0.100401472590439 A66X-F132X 0.100302169946805 V52X-S163X 0.100286858776701 V77X-V138X 0.0997139105239055 T50X-A165X 0.0993675221533761 V73X-G211X 0.0989067392370817 V69X-L214X 0.0986945582785299 I63X-A82X 0.0985271529709144 S78X-A88X 0.0984283475741161 L139X-L205X 0.0982330001563825 H62X-C140X 0.0982271939762827 A41X-G167X 0.0980851433605991 H76X-S212X 0.0976315646514987 L135X-L170X 0.0970271729542045 L46X-P156X 0.0964222125458885 G49X-A165X 0.0961303533862647 A143X-L213X 0.0957123621722179 L72X-L137X 0.0956654977917553 G60X-A66X 0.0955595525468507 G74X-V206X 0.0950730035326859 G74X-R81X 0.0945937635765712 S59X-C75X 0.0944812442033569 A66X-A87X 0.0942654371709222 V73X-L135X 0.0937757787617488 A41X-L158X 0.0937209435034172 G45X-P156X 0.0930622353022481 V37X-M42X 0.0928527631895264 V67X-I141X 0.0927072109646456 T68X-H76X 0.0923768141911205 C75X-I209X 0.0922267553056617 L38X-I160X 0.0917050299522111 E130X-L170X 0.0913653997399181 I63X-L158X 0.0912214955143285 L135X-L169X 0.0911957117608484 I141X-S159X 0.0909487594950171 L135X-A165X 0.0905602475116349 S59X-A157X 0.0905393656926479 A70X-L131X 0.0904448902611006 V73X-L80X 0.0903754789112401 V37X-L46X 0.0903342103339377 G47X-G92X 0.0902380376257712 Q136X-L219X 0.0901310997810645 G161X-G171X 0.0897318878230835 V86X-G92X 0.0893008920565137 F162X-H168X 0.0889534174607443 F142X-F220X 0.0887375126962091 V73X-L139X 0.0887021942958919 L38X-I48X 0.0885212486976193 V69X-T134X 0.0878200587699345 G49X-G60X 0.0877414649754371 N64X-V138X 0.087741351834309 G49X-G167X 0.0876865113741219 L137X-F162X 0.0864930743409094 S59X-A82X 0.0860471302064845 G47X-H168X 0.0859074822848118 H76X-I141X 0.0858898788283016 A61X-A82X 0.085645541656219 L34X-I172X 0.0856115324660952 P65X-L80X 0.0854162158831642 F142X-G211X 0.0853779053682953 V73X-L219X 0.0851054630252093 T134X-H168X 0.0849916995321789 T134X-S159X 0.0849805644056323 C71X-A143X 0.0848497508532365 L72X-V86X 0.0847027353405472 T134X-G171X 0.0844866830676023 G171X-G207X 0.0843972876543844 A66X-C140X 0.0841243831522656 G74X-P221X 0.0835620999394537 T134X-Y215X 0.0831972326281454 L51X-Q89X 0.0831381034181726 A61X-V69X 0.0830618352949966 S159X-G167X 0.0829739540244616 L46X-L51X 0.0819959866189244 V73X-P204X 0.0819477435205229 I40X-A165X 0.0814343679323262 L137X-G161X 0.0810832638766158 F44X-L170X 0.0810717108682728 L51X-V164X 0.0807378405805637 C75X-A82X 0.0806786145992078 L135X-N216X 0.0806005607547773 H62X-A83X 0.0805290772607514 G74X-A143X 0.0804510325639702 V138X-L158X 0.0799819988713502 L166X-G171X 0.0792942291151668 V73X-A82X 0.0791953035808453 S163X-G207X 0.0791281743271266 V138X-G207X 0.0790636761802546 L80X-Q89X 0.0784883826619955 L72X-A83X 0.0779567422001008 G49X-I63X 0.0776824788465014 I63X-A97X 0.0773765534942836 G45X-A61X 0.0772983723559335 P65X-G211X 0.0771360607823022 A82X-I209X 0.0760579264187903 V138X-N216X 0.0742386977472653 V86X-L205X 0.0740923217838718 C140X-A208X 0.0739987995972575 L135X-G161X 0.0738846238948323 I48X-A66X 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