[Wed Aug 24 17:59:13 2016] >Input file: TM4PE5ATD.pdb >TM segments: A563-580_A606-644_C563-577_C606-644_C816-831_B559-602_B604-643_B824-838_D821-837 MAIDEN score = -98.8787 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V613B-A639B 1.85983807576929 L566B-I606B 1.2240268515788 L615C-F637B 1.1660553562792 W608C-I630B 1.09012043636258 V816C-F638B 0.983763043793931 I824C-W635B 0.951264222228779 A606A-P624A 0.937831347112794 F639C-V821D 0.828292496228293 L567B-I606B 0.810319194743191 I824C-M631B 0.763656578670521 V820C-F638B 0.763026794929207 I631A-S832B 0.758935113077793 L609B-W635B 0.751211522398226 V635A-L825B 0.716578301432937 V820C-W635B 0.680891908015261 N616C-V640B 0.680667637902248 L566B-L609B 0.678904002204292 V613A-N615B 0.66474708138129 L612B-A639B 0.662820234644195 L632A-M829B 0.647735461813766 G612C-S633B 0.644942461294762 L615C-V640B 0.626410479698338 G638A-F614B 0.613323468312343 V569B-I606B 0.592168066426391 V575C-A606C 0.58611320954563 V573C-W636C 0.579130160750724 L566B-W610B 0.575325071135319 A637A-N615B 0.571228632496727 V569B-L609B 0.55354565438361 V613C-W636C 0.551789612952254 M641A-F614B 0.547644450550282 V573A-W636A 0.526008224228011 L577A-A606A 0.513537799104739 F609A-P624A 0.513297952358058 V613A-W636A 0.511961599451218 A637A-F614B 0.511354351156636 V613C-A640C 0.510321480109622 F614B-A639B 0.50800371756976 V613A-A640A 0.504289721879537 V575A-A606A 0.502937884209269 L614C-A637C 0.498098393169997 L577C-A606C 0.495019669022755 L614C-F637B 0.483487556300656 V573A-S610A 0.470828646941357 I824C-V634B 0.436267978813884 I831C-M631B 0.434721358982951 F639A-L825B 0.431928440773266 W611C-S633B 0.424162904500106 V613B-F642B 0.420541772746178 F614B-L643B 0.417702338092366 L580A-F627A 0.41595534860461 V573C-S610C 0.407791467005972 L614A-A637A 0.401224907795994 V570C-W611C 0.39513978924912 R630A-V635A 0.389637479544013 M562B-W607B 0.388511868725128 L632A-A828B 0.385363497724408 A574A-A623A 0.377922937430049 W636A-L825B 0.365498491169502 L609B-V632B 0.363634264053573 I828C-M631B 0.362505960142251 W611A-M641A 0.361705463064305 V613B-L643B 0.360384198700281 V566C-Y823D 0.356780326279555 L580A-F836B 0.353074894064655 W611C-N616C 0.350731889806256 N616C-A636B 0.350412869889888 S626A-I631A 0.34842036811559 V613B-V640B 0.347835989723195 W611A-N616A 0.34688900814679 V635C-M824D 0.344907734473807 L567B-I602B 0.344756285783676 F614B-V640B 0.343652485141 M607A-W636A 0.342957352771491 M607C-W636C 0.340614081956294 L580A-S628A 0.33883069219146 M634A-V644A 0.336433635386711 V820C-V634B 0.333610511943409 M634A-G611B 0.322903714714255 R630A-K604B 0.3226175498757 W611C-M641C 0.319842691770348 A574A-M607A 0.317928878506493 A629A-S832B 0.317155935660921 G567A-A640A 0.315499920350266 V635C-L825D 0.313262837916673 G827C-M631B 0.31181171688608 A574C-M607C 0.311766539702981 V573A-L632A 0.310528474191229 M565B-W607B 0.308717881780928 H571C-G612C 0.308050444528607 G638A-G826B 0.306887686766168 A629A-K604B 0.306705420615025 V566C-M576C 0.301597119142052 S569C-G826D 0.300019574244621 H571A-G633A 0.29859935700782 L577A-L632A 0.295263997498 N616C-F637B 0.292960677034896 G823C-V634B 0.292902330978949 L614C-M641C 0.290288501990515 A574C-G612C 0.289647656461348 G638A-L612B 0.289182419856057 G638A-L643B 0.288400791711195 L577A-R630A 0.287895315485936 L612B-W635B 0.284086236262322 L615C-V634B 0.281366297755148 W608C-V613C 0.281130885604213 V566C-V821D 0.279794717274828 W608A-V613A 0.277617033982057 M607A-R625A 0.277490553395318 G567C-A640C 0.268539794066053 L580A-G633A 0.267763281905802 A637A-A828B 0.264720266130913 G827C-S633B 0.264613090441259 N616C-G638C 0.263675709470804 G823C-S633B 0.262303990046497 V613B-W635B 0.26227984740198 G827C-W635B 0.260949188582238 L612B-S633B 0.259544743280946 V572A-M824B 0.25773736625912 V569B-I602B 0.25355658244935 G612C-W635B 0.253047806224256 V566A-M829B 0.252269533777364 A637C-A828D 0.251217570255953 G611B-W635B 0.246282232419988 W611A-G633A 0.242677684149896 S569A-A640A 0.241764133933398 G822C-W635B 0.241241254217687 V570C-W636C 0.238854585764365 G612A-G611B 0.237574360364277 K604B-L609B 0.237431659521307 N616A-G638A 0.237155732671126 Y578A-A606A 0.235950829641591 R625A-K604B 0.235611378915143 M576A-R630A 0.235478355614337 A606A-R630A 0.233739198046609 V613C-I643C 0.233261979145741 M634A-W610B 0.227801443596747 L614A-M641A 0.226904563228079 V570A-G612A 0.22048011307115 G633A-N615B 0.218875720804004 V569B-W635B 0.216976060063526 I828C-V569B 0.216955093486654 S569C-A637C 0.216317357053247 L632A-S832B 0.214491691775343 M562B-V640B 0.214285669460937 M607C-V634B 0.212009928724596 V573C-S832D 0.211419504712953 V566C-S610C 0.211419204517569 N616A-M634A 0.210859591142118 L564A-V570A 0.210321067321238 S610C-V635C 0.210245479944887 V566A-M824B 0.210130731985898 L608B-V632B 0.208493934332589 S610A-V635A 0.208427033082739 L615A-V644A 0.208388576426589 L614C-A640C 0.20832385912983 R630A-M829B 0.207208203503866 L615A-N615B 0.207004247229463 S628A-K604B 0.206554394865532 W608A-A623A 0.205659413770877 H571C-L614C 0.203145320610867 M641C-L643B 0.203021497230409 G612A-W636A 0.202771454742939 V575C-M829D 0.202757601351146 N615B-L643B 0.202056895401065 S610A-S626A 0.201954037954446 A821C-S633B 0.201862229916061 V573A-F639A 0.200553852417634 M561B-W635B 0.198839527670547 L566B-V613B 0.197961379913276 A606A-S626A 0.197543073807072 Y578A-S610A 0.197402693743674 R630A-A828B 0.197005465470836 G612C-L612B 0.196138393425572 V573C-F639C 0.19501765905428 N616A-G611B 0.194674352075474 W636C-G826D 0.194141905005829 L819C-M561B 0.192761319339166 M634A-F614B 0.192703720950969 M561B-W610B 0.191888174744465 V573A-R630A 0.191696505315786 G612C-I630B 0.19148484676736 L615C-S633B 0.190033115257728 M818C-V560B 0.187638947319938 N616C-G611B 0.187343727165667 H571A-G612A 0.187089848806308 V566C-I642C 0.186095245101936 S569C-M641C 0.18597473382276 M641C-L825D 0.185501816276929 M829B-S838B 0.185323670897429 G612C-W636C 0.184994567026935 P624A-G611B 0.183158772978142 N615B-F638B 0.182749836706416 R630A-W610B 0.182690363010964 M565B-G611B 0.182339274288329 H571C-M576C 0.182185504425596 M562B-L608B 0.182110795980568 F639C-F822D 0.181905074197953 H571A-M576A 0.181217087108448 M565B-S633B 0.179954228512495 I606B-G611B 0.179783225814303 G612C-G611B 0.179194904438632 L614A-N615B 0.178103276835547 A574A-G612A 0.177677518254038 M818C-V564B 0.176328941474926 W608A-R625A 0.176289560404657 Y578A-F836B 0.176020269520794 V566C-M824D 0.174065111899274 L615C-G638C 0.173412586804833 V613A-I643A 0.171475366619218 A640A-G611B 0.170657580676533 M607A-N616A 0.167965887397641 F609A-A629A 0.167762203662746 L580A-P624A 0.167126506261002 A637C-G826D 0.166745940726696 Y578A-S832B 0.166468676941725 V564B-V613B 0.16523700633741 L577C-W611C 0.164852496032314 L568A-W636A 0.164684237913752 S610A-R630A 0.163209925734479 H571C-V613C 0.162035235378764 W607B-W635B 0.161978811666462 M561B-V613B 0.160744145718673 W563A-W611A 0.160367848981692 A574A-S610A 0.159787790598195 W636A-G611B 0.158848851172557 M562B-V634B 0.157830218046197 I568B-W635B 0.157678344404587 S610C-W636C 0.156986583484574 V569B-A605B 0.156630013396564 V573A-A827B 0.156267017323312 V570C-M824D 0.155010862699844 S626A-F836B 0.154731789023062 V570A-M634A 0.154674036430239 A574A-R630A 0.154265560991769 S569C-W611C 0.154145932672864 V820C-V564B 0.154095205807699 W636A-S832B 0.153883579115769 G612C-M634C 0.153821909526778 F609C-F637B 0.152344820817401 S628A-F836B 0.152295296715229 G612A-G633A 0.152111327508812 L568A-G826B 0.150703830044715 G638A-L609B 0.149579974728542 R625A-A605B 0.149246725594244 A637A-G611B 0.149053524120982 G823C-M565B 0.149021341451034 V566A-M641A 0.148440677062934 W559B-L643B 0.147704970348959 A640C-M824D 0.147527304688658 V566C-A637C 0.147051134188273 V573A-A830B 0.146547029419613 V572C-V635C 0.146243936920771 F639A-A827B 0.146222393157929 A821C-M631B 0.145684338269529 A637C-M824D 0.144220351791277 M565B-V640B 0.144134327579984 M562B-V632B 0.143438786937423 V644C-A636B 0.143165293123412 I631A-W607B 0.14311899186977 V569B-A639B 0.142607347513516 M641A-I641B 0.14129979460066 G823C-F637B 0.141132538151538 F817C-V634B 0.140986983628558 M576A-A828B 0.139730796352668 G638A-M829B 0.139527667448776 A640C-I641B 0.139452891302169 I643C-Y823D 0.139119861193987 F639C-A827D 0.138553992355532 V572A-V613A 0.138481697308805 I642C-V821D 0.137573954959155 M576A-V635A 0.137442649449227 V566A-S610A 0.136148898879062 L614C-W636C 0.136113223765648 L565A-G826B 0.136021070753179 H571A-A629A 0.134537371334479 Y578A-I631A 0.134442808992923 V569B-W610B 0.134168840470986 V575C-V635C 0.133921326974652 A574C-A828D 0.133594783109717 A574C-A640C 0.133340656938702 M818C-V634B 0.133326153898192 L568C-W636C 0.133269617832077 A574A-I631A 0.133211663903146 M641A-N615B 0.132587492126368 M634A-W607B 0.132137492496818 V573A-M824B 0.131565688719965 M576C-G826D 0.131217009259601 A640A-A828B 0.131072824041383 S610C-M631B 0.130885723805046 A606A-A623A 0.130207212419421 L577A-W611A 0.1296026930992 M576A-I834B 0.129275042183286 W608C-W635B 0.128955649982437 G633A-W610B 0.128945469752588 L609B-V634B 0.128821760292375 A640C-A828D 0.128401985547896 M607C-N616C 0.127885642784893 L615C-V644C 0.12771433380251 M818C-V569B 0.127391561219635 G638A-W559B 0.126866774953726 V570C-M641C 0.126463946825162 I568B-W610B 0.126326644698528 W608A-W636A 0.125930934527404 V570A-W611A 0.125264728645357 H571A-M607A 0.124100519114206 M561B-L609B 0.123804918067386 I643C-L643B 0.123778769933264 S610A-W636A 0.123752800758691 G822C-I568B 0.1233183597296 L609B-A636B 0.123301454656406 L565C-Y823D 0.123224362453691 W608C-W636C 0.123170313305976 V572C-V613C 0.122858548388362 V566A-A637A 0.122454638064616 V570C-M634C 0.122279055419384 G822C-A636B 0.121935152710101 N616A-W636A 0.121882711138255 F639C-G826D 0.121851178442782 G822C-I831C 0.121665351073483 W607B-F614B 0.121616113153898 S569A-W611A 0.121408669095068 G823C-I630B 0.121359781810433 F563B-F614B 0.121315795490421 A574A-V635A 0.121180806123322 L565C-L614C 0.121163056153822 V572A-A828B 0.120332989417984 W563C-H571C 0.120243774935299 L580A-S838B 0.120241462687233 V613C-V632B 0.120189883213484 I631A-A605B 0.119958574633304 L614A-L632A 0.119947725968448 L577C-L825D 0.119837307674164 L579A-M607A 0.119592565574576 L568A-L614A 0.119151930753417 L614C-I630B 0.11914738394764 A629A-S838B 0.119143869173461 G612A-A623A 0.119030202125851 S569A-A830B 0.118891483764917 A606C-A637C 0.118782649212478 M565B-V634B 0.118521522650551 V613C-M631B 0.118220488129438 L566B-A605B 0.118088377444687 N616A-A623A 0.117966942750228 L819C-I828C 0.117603247293619 F627A-F836B 0.117522102471904 V570A-V644A 0.117516730803848 L615A-G638A 0.117160385050095 S626A-T835B 0.117035331819785 L614A-A640A 0.11676966648378 V613A-A637A 0.116604632801822 A828D-F836D 0.116586542946273 V573C-G826D 0.116421739336397 R625A-M634A 0.116258294196556 G638A-A639B 0.115958512145617 A623A-G611B 0.115947053787046 L579A-S832B 0.115918663472872 A574A-P624A 0.115903353656512 A826C-V632B 0.115558963905722 L564A-L614A 0.114910380064495 S569C-L614C 0.114662489770434 H571A-V613A 0.114384340571428 L565A-L614A 0.114113373022854 A637A-S832B 0.11399513145341 H571A-W636A 0.113864277692034 V566A-G638A 0.113825885224277 V570A-S610A 0.113567924853109 L579A-L833B 0.113480481499114 A821C-A639B 0.113413551536012 G633A-G826B 0.113161503241405 V572A-L825B 0.112710206990881 V566C-G638C 0.112198234784727 L614C-L612B 0.112143557524065 G827C-V569B 0.112106284463224 H571A-W608A 0.112075486994556 V573C-G612C 0.112036470721952 A605B-A636B 0.11183126505417 S569A-A637A 0.111711793624959 F609A-F639A 0.111436584839893 G633A-M824B 0.111329519024747 V569B-S633B 0.110982067752225 W563C-W611C 0.110869049689788 V572C-A828D 0.110855248677523 V566C-L825D 0.110391524814047 G823C-V569B 0.109822291685148 A821C-A636B 0.109619292989759 S569A-A606A 0.109551308601267 V825C-I568B 0.109395377893138 I643C-V640B 0.109215872835772 G822C-V632B 0.108726723007876 A606A-W636A 0.108642917272415 A640C-F637B 0.108340668020491 V816C-V560B 0.108152504274722 Y578A-F609A 0.107821863715836 W608A-G633A 0.107611605892213 F614B-F637B 0.107580535432449 A637C-L825D 0.107044544546063 V816C-A636B 0.106887480647083 A606A-V635A 0.106826565487468 V572C-A637C 0.106580488467368 V564B-L609B 0.1065392440823 L608B-S633B 0.10644413280988 F563B-V613B 0.106380471970579 G612C-A639B 0.106338918721192 W636C-A827D 0.106100555162521 F639C-M824D 0.106003927401887 A574A-S628A 0.105992791569877 L566B-V632B 0.105809856338899 L632A-I606B 0.105219395899735 R630A-A605B 0.105210833842629 Y578A-M829B 0.105165403636616 A606C-W636C 0.105000518730657 S610C-A636B 0.104463247801033 S626A-A605B 0.104064657870829 V575A-A623A 0.104050320121322 A629A-W607B 0.103527986901135 V635C-F822D 0.103385953641591 G611B-F637B 0.102924179314226 V573A-G612A 0.102680513516769 G611B-F642B 0.102631683745578 L564C-L614C 0.102435059059195 G638A-A827B 0.101648575128845 A637C-F637B 0.101629388458659 S569A-S832B 0.101105782397817 G638A-F563B 0.10086067166389 G612A-R625A 0.100690245524186 M818C-I641B 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