[Wed Aug 24 18:34:29 2016] >Input file: TM4S0VCGD.pdb >TM segments: A14-27_A44-59_A76-97_A123-138_A163-183_A403-417_A449-465 MAIDEN score = -39.6222 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- BBeads pair Empirical energy ----------- ---------------- C415A-V450A 1.56138698919456 K79A-M138A 1.13663636558092 F169A-Y174A 1.00036867797872 L20A-D51A 0.867915042540833 Y416A-V450A 0.824280878803063 V91A-I123A 0.823766046242012 L53A-C58A 0.749445761160189 V411A-N453A 0.716018552492632 V89A-T173A 0.712725797443392 V93A-T173A 0.708755756583177 L94A-I123A 0.705216812720175 S90A-I123A 0.689325762547659 K79A-I136A 0.686311274865694 V408A-N457A 0.686189831590914 A50A-V87A 0.649799128455799 Y416A-L449A 0.647222179383593 C168A-T173A 0.645591732413219 V411A-A456A 0.639378727947834 V17A-A455A 0.620554841415332 V408A-A413A 0.610452757364765 L20A-V52A 0.598123842983036 N23A-V52A 0.574772122492047 V91A-W124A 0.573193255149449 F16A-A455A 0.570966516824792 K163A-C168A 0.566133401368874 F16A-T55A 0.564229193027341 L171A-P177A 0.563825278979946 C415A-N453A 0.558642155094429 A19A-D51A 0.557935892427588 Y83A-I132A 0.547138338049316 P82A-A135A 0.546726777565768 F170A-M175A 0.542330675338875 V15A-Y451A 0.537757655646345 N46A-V91A 0.527316621432997 M404A-L464A 0.52209730668041 N23A-L49A 0.521226945015242 V54A-L59A 0.519948066827457 A19A-V52A 0.51140077223641 S48A-S454A 0.510404031290536 A19A-T55A 0.506311543289437 V45A-A50A 0.498656457311428 A50A-V91A 0.497173475866414 A50A-V89A 0.488617855609075 V93A-Y174A 0.487841974866305 L77A-P82A 0.487615915557934 T55A-Y451A 0.483678672270557 V87A-W124A 0.478493041859974 V54A-S88A 0.475268341873676 Q85A-Y416A 0.474694544909095 R403A-V408A 0.472536499700509 V26A-S48A 0.469883055536468 V18A-N23A 0.469452858502335 C58A-I81A 0.46656121890347 N23A-V45A 0.463106792044208 K79A-V137A 0.457810159965517 V15A-S454A 0.454337444378716 V54A-L84A 0.448470952518971 M404A-I460A 0.448051379649566 V87A-C128A 0.446752454848309 V18A-S454A 0.445864901871164 A19A-V24A 0.444919236327133 V24A-S48A 0.43941987939923 D51A-I56A 0.430747947887522 R403A-L464A 0.421880248747315 Y83A-S88A 0.416175406771249 S97A-M181A 0.414977920349189 F16A-I21A 0.414554638106351 C415A-L449A 0.411180572412866 S90A-S127A 0.409365555282314 V15A-L20A 0.408371613147989 L410A-C415A 0.403766904573544 V91A-S127A 0.389304797102593 C58A-L84A 0.387669362589007 W124A-I129A 0.386353112470623 H166A-M175A 0.381738235313374 F412A-N453A 0.378879625345095 V17A-G22A 0.37449118776428 S88A-S127A 0.374346598950664 C27A-V45A 0.370798215925231 T86A-T173A 0.361118780570754 T57A-L84A 0.360399607183467 C128A-F169A 0.358801818757801 L47A-T95A 0.358370309963316 T86A-S127A 0.358227070625707 V54A-Q85A 0.358217987893134 T86A-C168A 0.356736373220393 V411A-Y461A 0.356653189242825 P82A-S90A 0.354700059372342 T86A-M131A 0.346684375403893 C78A-A135A 0.345508570709834 Y83A-M131A 0.344060441847071 V26A-V45A 0.343580732736612 V91A-M181A 0.336433635386711 V45A-M404A 0.336433635386711 L47A-V91A 0.334556075149571 V80A-A135A 0.334032187553104 N453A-P458A 0.333745460486706 L47A-S92A 0.332223927261366 V17A-D51A 0.326507741938133 V18A-Y461A 0.325221577878794 R403A-N457A 0.324378753820475 L59A-Y451A 0.322236200106822 P82A-S127A 0.322002530498398 V91A-L96A 0.321937059374108 A50A-S92A 0.32001995376745 V54A-Y451A 0.313438436647942 M175A-V408A 0.309611835126883 L84A-V89A 0.307174538197207 V80A-Q85A 0.306081912683502 I56A-C78A 0.304546114925895 V87A-Y174A 0.303832337892269 K79A-Q134A 0.301173542449301 L20A-A455A 0.292817876046634 V89A-C168A 0.286355518932715 S97A-P177A 0.284381392186954 L53A-Q85A 0.27866081514682 C415A-N457A 0.27795218225784 C27A-I460A 0.277608935016473 V411A-Y416A 0.277237060088375 V17A-C58A 0.268898222142867 C128A-V172A 0.267368921027935 C27A-N457A 0.261161743170531 C415A-A452A 0.258168418520459 L53A-S88A 0.2569378764733 L53A-L84A 0.254606820295204 T173A-C415A 0.252655410358148 S97A-Y174A 0.249003958773182 L25A-S48A 0.248965529982016 N46A-S90A 0.247444977818063 T86A-T95A 0.245620058238132 M181A-R403A 0.244390183301633 Q134A-M164A 0.24398196823925 V93A-C128A 0.242497774902533 P82A-C128A 0.239364341829631 F170A-A176A 0.236605218556631 L59A-P82A 0.23504441265068 Q85A-F169A 0.23463050856534 D51A-Y451A 0.233850785200293 N46A-P458A 0.233849826458924 F412A-A455A 0.231381116531585 G22A-Y451A 0.231263190419856 S97A-S127A 0.229074554507774 R403A-N462A 0.226875805078659 Y451A-P458A 0.22632254774837 C168A-M175A 0.225536426193868 S48A-N453A 0.225018052575077 S76A-I81A 0.223731482767739 V89A-L94A 0.223728291216768 L20A-T55A 0.221754201685055 Y174A-V408A 0.220982571601414 N457A-S465A 0.220970251680301 C27A-P458A 0.220601306700541 L96A-T173A 0.220243741431276 C78A-Q85A 0.219743882186756 Y83A-A135A 0.219251364553763 V52A-Y83A 0.21864251863343 K79A-L84A 0.218367234713358 V172A-P177A 0.217358114131008 V93A-M406A 0.214245212701437 N23A-P458A 0.214024689071858 V172A-M181A 0.214024648787314 S88A-Y451A 0.212658702635452 V89A-F170A 0.212503884122445 V18A-S48A 0.212166265054509 S88A-P133A 0.210275338931285 C58A-C78A 0.208480532211712 I44A-T95A 0.20788068564479 Y83A-F169A 0.207454396033165 L49A-V91A 0.207435357634214 T55A-T86A 0.207032909353565 L47A-V89A 0.206644198280497 V24A-V52A 0.205137086827555 L59A-N453A 0.204379661583492 L449A-N457A 0.204134525988096 T95A-L178A 0.203325377605065 M181A-V411A 0.203143338940166 L417A-N453A 0.202637496056598 I44A-V408A 0.202244552031491 V93A-P177A 0.202236848885085 K79A-I132A 0.201312083556287 S88A-P177A 0.200744002544729 C58A-P82A 0.200359764152569 L171A-M181A 0.199847234483328 V26A-I44A 0.198425587449681 C78A-T86A 0.196552908338539 V407A-F463A 0.195496020440595 T95A-L405A 0.193253954046207 C58A-Y451A 0.192824819174072 T57A-C78A 0.19267368108777 V87A-M131A 0.192370053723744 P133A-H166A 0.190729728522472 S76A-M131A 0.187453758027723 I459A-L464A 0.186557004294107 S90A-T173A 0.185264290687893 S88A-Y174A 0.184867385624198 S48A-V89A 0.184692292552702 D51A-A456A 0.183076959028467 V87A-S92A 0.182761332507086 F16A-T57A 0.181643048949022 V24A-S454A 0.181479447825872 S92A-P458A 0.181351070169423 S48A-A452A 0.181224706508872 S92A-M131A 0.181201211862465 Y416A-S454A 0.181195956855461 V408A-Y451A 0.181108860589848 T57A-I81A 0.180313165561568 C78A-I132A 0.179437445815252 L409A-P458A 0.179359280232045 G22A-N46A 0.178437461902091 S88A-Y416A 0.177941841285967 L84A-P133A 0.177697227272852 T95A-A176A 0.177220952438428 L405A-P458A 0.177207459244254 D51A-T86A 0.176666069914793 V93A-C415A 0.176546462743007 L96A-C179A 0.176528097979025 L47A-V93A 0.176296002452858 S90A-S454A 0.175677454686406 Y165A-Y174A 0.175427626413751 S92A-L410A 0.17345601779021 H166A-L171A 0.17227649115131 I81A-C128A 0.172048469799048 C168A-Y174A 0.171682377748358 L410A-S454A 0.171317529086603 S90A-Y416A 0.170205197420591 V93A-V182A 0.169664506718216 S92A-Y451A 0.169502613161883 A50A-Y451A 0.16874565110951 T86A-H166A 0.167916587720904 L405A-N462A 0.166742180273638 S48A-Y461A 0.166060348055953 L47A-P458A 0.165715137788723 V24A-Y461A 0.164240719344448 V18A-V24A 0.164138227196002 L84A-S127A 0.163929706448867 V407A-F412A 0.163352160560696 S90A-L178A 0.163278978335604 P177A-V182A 0.163275283792489 V172A-A413A 0.161851543472443 V172A-L178A 0.16143277388736 S48A-L94A 0.160142106568842 V52A-A456A 0.159760633156293 A19A-A455A 0.158529816488087 V89A-S454A 0.157018214594951 M406A-F412A 0.156880902195427 I14A-N453A 0.155384757715579 H166A-Y174A 0.154177703136724 T86A-I136A 0.154012157130223 S92A-L405A 0.153808947877346 L96A-V408A 0.153144270898941 K79A-P133A 0.152337446782163 I44A-M406A 0.15227980373588 V182A-M404A 0.151209897144552 V54A-V87A 0.150886152772502 L171A-A176A 0.150138659491097 S92A-V126A 0.148328314011914 N23A-S88A 0.148027897330612 P82A-Q134A 0.14798175914197 S48A-L53A 0.147732451105924 V182A-L409A 0.14740724327382 V15A-L59A 0.147388957743798 G22A-I44A 0.14693813807485 S88A-S97A 0.146584630265751 L53A-N453A 0.146493156898168 N46A-N453A 0.146164507525938 I130A-I167A 0.145387608644543 V45A-V87A 0.145373106892946 V87A-V450A 0.145259558547624 V91A-I130A 0.144833372340889 V54A-S454A 0.144769405338895 Q85A-P133A 0.144301617698194 Q85A-C128A 0.142946268638678 L84A-Y451A 0.142687303283438 S88A-N453A 0.142635663826809 V87A-I125A 0.142242511687799 T57A-S88A 0.141542626732613 L49A-V54A 0.14140952509025 C58A-S76A 0.14104644711655 V89A-V172A 0.139158542664104 M181A-A413A 0.138637884243159 P177A-Y416A 0.137866661949753 K163A-L171A 0.137516661913021 S127A-C168A 0.137480818955751 I21A-I459A 0.137428897579944 I44A-I459A 0.137085351217562 L47A-V52A 0.136771857753718 V45A-Y461A 0.136370257282502 C179A-V408A 0.13622303406113 I14A-A19A 0.135794252220087 V18A-V450A 0.135405160522926 A19A-N46A 0.133279775645595 A50A-N457A 0.13304839798887 I21A-A452A 0.132662543562978 T57A-P82A 0.132501984253024 L47A-I459A 0.132481625419982 Y83A-Y165A 0.131982019237847 I21A-V52A 0.131900495942197 L409A-Y461A 0.131091869217112 L94A-T173A 0.131034350765715 Y165A-F170A 0.130359780479129 M164A-Y174A 0.129530409766536 N46A-T55A 0.129459301514772 L47A-Y461A 0.129265581418853 I21A-Y451A 0.129232130607223 L183A-L410A 0.129107961129294 L96A-V407A 0.129073369365397 S97A-V408A 0.129040907894885 V89A-M175A 0.128637687187412 D51A-N457A 0.128523475535384 S90A-V172A 0.127939585463663 I123A-T173A 0.127486097306458 I44A-S454A 0.127365598356285 I44A-I123A 0.127049102658466 V17A-S48A 0.127040749683154 T95A-I125A 0.126865970969995 C128A-Q134A 0.126059538920488 T95A-N457A 0.125525924776663 V52A-V80A 0.125066216677719 V91A-S454A 0.125008009499185 V26A-A456A 0.124851867253348 S97A-T173A 0.124508338148623 S97A-L180A 0.124203257857353 L96A-M181A 0.123807417616188 V407A-S454A 0.123551293371114 Y416A-Y451A 0.123382804724139 N453A-Y461A 0.123133146164428 N23A-L47A 0.122634636583205 T95A-P177A 0.122368309135984 V45A-L96A 0.122152422178821 V45A-S454A 0.121923714923212 S90A-T95A 0.121738911091443 L94A-W124A 0.121507903614869 C179A-L410A 0.121023762836334 L20A-I44A 0.1209208638989 N23A-A452A 0.120754216827113 I130A-I136A 0.120724892881942 S92A-Y416A 0.120245903796058 S97A-V172A 0.120169616253031 I81A-Q134A 0.120149713519742 L180A-L410A 0.1200882882479 L47A-L405A 0.119954846085082 C58A-S88A 0.119700223443387 A50A-I81A 0.118795447316203 L47A-A455A 0.117623980467464 M406A-C415A 0.117623409305698 A19A-V45A 0.117554721492838 L409A-L464A 0.116690329056217 A413A-N457A 0.116637049525131 L409A-I414A 0.116484341718881 V15A-A455A 0.115533090651095 L405A-S465A 0.114586262821229 C78A-P133A 0.114314361650786 V26A-S465A 0.113983471920762 S88A-C415A 0.11365900404128 V93A-I123A 0.113479736562401 P82A-V87A 0.113464349178905 V80A-Q134A 0.112905102380316 S76A-Q85A 0.112384376882787 I56A-T86A 0.112330232912898 M164A-F169A 0.112322582969345 L25A-L47A 0.112194402343022 Q134A-F169A 0.112182605110335 V52A-P458A 0.111635739969118 L49A-L84A 0.111161038569513 L20A-L47A 0.110851717485778 A135A-H166A 0.110726727188064 L49A-Y451A 0.110695714897716 A50A-L94A 0.110446374554757 N23A-I44A 0.110256496426586 S97A-L183A 0.110236866187931 G22A-V54A 0.109437390013195 V26A-I460A 0.109414637737013 L49A-L94A 0.109167217686799 L47A-L409A 0.109060144726955 P177A-M406A 0.108851947041171 L183A-A413A 0.108539019684368 S127A-T173A 0.107885666404693 V18A-C27A 0.107059109856408 N453A-N462A 0.106903268580098 S97A-F412A 0.1067982648595 V91A-A413A 0.106779278853846 I44A-S97A 0.106534394284968 C27A-S454A 0.106472618826282 S88A-A413A 0.105872130318773 M404A-S454A 0.105472039688594 A50A-L449A 0.105173249088134 C58A-V89A 0.105060738930236 V80A-S88A 0.104787844476141 L409A-V450A 0.104127164909265 A19A-N453A 0.103822595316554 L94A-L410A 0.103724629676195 I44A-A455A 0.103679717491056 L94A-V408A 0.103574123023238 V45A-T55A 0.103075952859873 V18A-L49A 0.10282011112066 I81A-V87A 0.102415274282789 S88A-A455A 0.102012855036008 I460A-S465A 0.101264774566389 M181A-M404A 0.100799929526327 L94A-L405A 0.100798355487617 L25A-D51A 0.100649554840997 L20A-N46A 0.100507616953731 L180A-L405A 0.100402254109665 V91A-L409A 0.0997918289767343 Y174A-V450A 0.0993728636136559 A456A-S465A 0.0993553633130886 V54A-V93A 0.0989970265730822 T57A-V87A 0.0988605178521107 V87A-Y451A 0.0985878879108411 L96A-Y174A 0.098280488848264 A455A-L464A 0.0980682599218952 V26A-D51A 0.097904473874201 G22A-T55A 0.0976157157106508 A135A-Y165A 0.0976064005041857 G22A-L53A 0.0975863707659439 V93A-L180A 0.0975498989360757 K79A-T86A 0.0971591681443937 L171A-A413A 0.0970966712321482 V24A-V45A 0.0967969057983886 L25A-L53A 0.0963412020119296 L53A-P82A 0.0962165929216561 Q85A-L94A 0.0960070726523257 N23A-Y461A 0.0956177647455867 V407A-Y416A 0.0955017946349024 L49A-S90A 0.095440453831624 A135A-F169A 0.0951259659815937 L409A-L449A 0.095120057807609 V26A-S454A 0.0950928066918055 S90A-P133A 0.0950011910768218 S90A-C415A 0.094589145512763 I81A-T86A 0.0943204616068982 A19A-Y461A 0.0942726298817123 L47A-V450A 0.0941506711915177 V407A-S465A 0.0940247802150713 L96A-I414A 0.0937402921358085 L171A-L180A 0.0936029242379464 I44A-V93A 0.0931458202363729 A413A-Y451A 0.0929270073242687 L180A-A413A 0.0927254586459954 P458A-S465A 0.0926312582012949 A19A-V450A 0.0926076761509886 I44A-L49A 0.0925104960451937 S90A-V126A 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