[Wed Aug 24 18:14:58 2016] >Input file: TM4U4GCGD.pdb >TM segments: A516-535_A540-575_A743-764_C2052-2071_C2076-2111_C2280-2301_B1284-1303_B1307-1343_B1512-1532_D2820-2839_D2844-2879_D3048-3069 MAIDEN score = -109.0169 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- BBeads pair Empirical energy ----------- ---------------- I562A-W567A 1.22577699453813 I1330B-W1335B 1.20340749424573 I2845D-W2850D 1.09235565167343 F1338B-V2282C 1.00456328828445 F2874D-V746A 0.983355404837068 V527A-F547A 0.975650705804921 V1295B-F1315B 0.961971146467476 I2866D-W2871D 0.96144242576969 V1297B-F1315B 0.958662167563943 P2091C-R2097C 0.926772555549249 V529A-F547A 0.908211656257954 F2873D-V746A 0.89378983444834 C1287B-Y1292B 0.884475735856022 M2857D-W2104C 0.83063400104609 I541A-W546A 0.824937268041364 S1296B-F1315B 0.8148537126835 P555A-R561A 0.79904112290876 L2849D-L2094C 0.78528738907905 V2831D-F2851D 0.768194483994492 W567A-L572A 0.76217639336741 I2077C-W2082C 0.759875082422987 V3050D-F2106C 0.755017296394322 V1514B-F570A 0.74690514455884 W2103C-L2108C 0.74527291678911 L1522B-V530A 0.744621858420259 S528A-F547A 0.741356200688347 L1518B-V566A 0.738504837298788 V1331B-L2290C 0.737550366525167 V2831D-F2836D 0.717963867660186 W2850D-L2094C 0.706118351796487 W2850D-A2855D 0.70554875126446 L2835D-F2851D 0.68721937285564 L1299B-F1315B 0.681409395981937 W568A-I573A 0.678773086080845 F1300B-F1315B 0.670576968342638 Y2060C-A2087C 0.66920844640529 I1330B-G2289C 0.654121980227185 F2856D-I2098C 0.651549984417639 L1301B-A2297C 0.646413637435614 F2836D-F2851D 0.643937529534043 L1326B-L2081C 0.63973190877093 M1526B-L533A 0.639066596472717 V3064D-L2094C 0.636199292560905 W2082C-A2087C 0.635795372860311 A3065D-L2069C 0.631028142423957 S2832D-S2852D 0.617161327470392 F2068C-N2079C 0.616902297924557 I1330B-A2293C 0.613008573907718 F1320B-G564A 0.612632046367968 A3061D-L2094C 0.608707225326221 V1334B-L2286C 0.606797733548699 A1529B-L533A 0.600860985270036 F1300B-W1314B 0.598327180947306 V2825D-G2830D 0.596828631113804 G1332B-F2088C 0.593601764089114 V2870D-I749A 0.593234848968818 V2063C-A2087C 0.592774943304404 R2860D-L549A 0.586389407733532 A1525B-L558A 0.585498027193108 L1313B-S557A 0.580167346057921 S1325B-L2081C 0.579166608567922 I2845D-R2092C 0.576370756397382 R1324B-I2077C 0.57405505219201 I1309B-R556A 0.573532429550093 G2868D-F552A 0.567429053004258 L1326B-V2296C 0.566047357798976 I1517B-V566A 0.563944451809847 V2831D-A2855D 0.563124602818112 V1334B-I2285C 0.560714556215489 G1521B-V566A 0.552120385743746 F1515B-A523A 0.54893328473994 W546A-A551A 0.548184626698005 V2870D-L750A 0.546354278478906 S2852D-R2097C 0.544307916305227 S1296B-G1318B 0.543085404472772 W1285B-F1290B 0.542638490551085 M1321B-W568A 0.541742702073345 S528A-S544A 0.541657930275415 F1338B-L2286C 0.539267312642743 V1289B-G1294B 0.539085964594416 V527A-F532A 0.538951219067112 V1331B-W1336B 0.535960643758497 S2863D-L756A 0.528201322271514 L2862D-V760A 0.528106655965022 R561A-V566A 0.526964602456185 S2832D-F2851D 0.525318283278478 L2853D-S2093C 0.52288059453812 L1527B-S559A 0.521977671846297 L1313B-L558A 0.520693007329138 F532A-S544A 0.5175985894529 F532A-F547A 0.516119620745019 V1331B-A2293C 0.509150242877124 L2849D-R2097C 0.508086498319728 I2866D-L754A 0.504874357791286 V2057C-G2062C 0.497585812669101 L1522B-V563A 0.495220522330944 V1528B-L558A 0.494823206314316 F2068C-S2080C 0.491556683586041 R1324B-F2078C 0.484880329731807 F2836D-S2848D 0.484310285393099 V1298B-A2293C 0.480984392515068 S1296B-S1312B 0.479869788193281 F1310B-R556A 0.478674614840547 L2853D-I2098C 0.478424995325682 L3060D-S2095C 0.478264991133585 L3058D-V2099C 0.47771487392153 Q2858D-W2104C 0.474964573970073 V2870D-G753A 0.473379536381575 V2833D-F2851D 0.467954184124482 Y2828D-V2833D 0.467834178474612 L1522B-I562A 0.467168163037675 S2863D-L754A 0.466771103554031 S2832D-A2855D 0.461331160706699 L3054D-V2102C 0.461053579009923 L3054D-W2103C 0.460090176429886 R1329B-V1334B 0.456395420019804 L2853D-P2091C 0.45297968677793 A1525B-V530A 0.451248347057113 W1336B-M2089C 0.448610839231888 F1337B-V2282C 0.448238167491258 S1327B-L2292C 0.447682500319565 S544A-L549A 0.44718517737849 S2852D-L2094C 0.446278207214997 S1296B-A1319B 0.443632675395695 R2865D-V2870D 0.442547205896577 L2862D-A757A 0.440965294263414 V527A-A551A 0.439025700724493 F1338B-F2283C 0.437734942960344 L2067C-F2083C 0.437424347974748 L3063D-S2095C 0.435866486149461 L531A-F547A 0.433483039602534 F1320B-R561A 0.432128444605258 R1324B-L2085C 0.432023461027361 A1291B-V2287C 0.431773311086574 M3062D-S2095C 0.43165417720948 R2865D-L549A 0.431578373525548 I1330B-F2088C 0.428899446273381 L1313B-R561A 0.426989776967827 A3061D-V2099C 0.425826279486759 A3061D-V2066C 0.424848878150591 F2068C-F2083C 0.424791639859628 W2871D-L750A 0.424353066897023 F2856D-R2097C 0.42341284565148 F2846D-R2092C 0.422860845059955 S528A-A551A 0.421026054617915 V527A-V563A 0.419788544671579 S2848D-L2853D 0.418588388962243 V1295B-A1319B 0.415391884825106 R2097C-V2102C 0.412652594708532 V563A-W568A 0.40702190266705 M1526B-S559A 0.406380541455654 Y2828D-Q2858D 0.405381794841293 S2093C-I2098C 0.402126321099187 V1295B-V1331B 0.401325554032752 R2860D-F542A 0.394628640618511 S1327B-L2295C 0.392896879771294 A1525B-R561A 0.39242112954873 V1295B-W1335B 0.388989525839898 V2867D-W2872D 0.388967305908462 G3057D-V2102C 0.388591122415959 A1525B-V563A 0.387506777707854 L1530B-V534A 0.38749489129498 W1335B-V2282C 0.387423556076263 I2098C-W2103C 0.385547025460138 V1514B-W567A 0.385409096599207 V1334B-G2289C 0.384693165414641 Y524A-Q554A 0.38346735531537 S2064C-S2080C 0.381411426431839 F1320B-I562A 0.379482706987582 R1329B-F2088C 0.379129506255017 V1331B-L2286C 0.376287962469716 W1336B-I1341B 0.375298020634109 C2823D-Y2828D 0.374593078593979 V2287C-L2292C 0.37405294284074 V2867D-L754A 0.372411217281888 A1525B-I562A 0.371424228698432 S1312B-L1317B 0.370103947040993 W1314B-A1319B 0.369870442016458 L1299B-G1328B 0.368245776614518 Y2828D-A2855D 0.366246979796136 F532A-N543A 0.366036228058524 L2067C-G2096C 0.365834371411602 S2863D-A761A 0.364642190134282 V2063C-W2103C 0.364432108515691 L1522B-V527A 0.364417118894685 L1518B-W567A 0.362874793174033 S2064C-S2084C 0.362496197173377 S2832D-S2848D 0.362286085419417 N2847D-R2092C 0.360971605493077 F2851D-F2856D 0.356838814408944 V1295B-Y2284C 0.356251197376169 Y1516B-G565A 0.352350111780136 G1521B-Y524A 0.351063956949304 Y1292B-G2288C 0.349939525031474 G2830D-Y748A 0.349938514774125 V1295B-G1318B 0.348440206871123 S2064C-F2083C 0.346641966078718 V1514B-Y524A 0.34658646997651 P2859D-R2865D 0.345962395808844 S2852D-I2098C 0.345621689578728 V3055D-L3060D 0.345199753801846 W1335B-L1340B 0.343890302661443 Y1292B-V1297B 0.342182061472053 A1512B-A523A 0.341620063114614 G1332B-M2089C 0.340771317971494 V2063C-V2099C 0.338015982402872 F2836D-N2847D 0.335127218357128 V3050D-Y2060C 0.330937887108097 V2099C-W2104C 0.330437900717105 F2083C-F2088C 0.329187490770503 G3057D-A3065D 0.328310944349234 V521A-G526A 0.327835092767877 G1520B-A523A 0.3273451509327 Y1292B-Q1322B 0.326784189145756 G2868D-A757A 0.325897403234947 M2857D-G2100C 0.325140457562761 L2853D-L2094C 0.323148911354688 M2857D-G2101C 0.321687409743197 F2874D-F747A 0.321444922592192 S2064C-A2087C 0.319222703704145 Y2828D-V746A 0.318848461914569 Y2828D-G2101C 0.317367780388562 R1329B-N2079C 0.316589461967084 V1519B-L1524B 0.315355009321705 G2854D-G2869D 0.314191576498907 G2281C-G2289C 0.313978027679436 Y524A-S548A 0.313607304883549 G3056D-G2096C 0.31330354328299 V751A-L756A 0.311241232600789 A1525B-G565A 0.310336253669787 G2830D-G752A 0.309918533920513 E3068D-L2094C 0.309389372471361 F2856D-G2100C 0.309172915203834 I2866D-A757A 0.306452631040862 S1296B-S1316B 0.305119690434189 V1298B-L2290C 0.303860123090356 G2869D-M553A 0.303830961016031 A3061D-G2062C 0.303099415286312 S2861D-L545A 0.302246042491485 G1523B-G564A 0.30198769407576 A1525B-S535A 0.300468323717302 G1332B-G2291C 0.299856130246974 L3058D-V2063C 0.299554270372045 G1318B-G560A 0.298468778690953 C2823D-F2873D 0.298183290527702 G2868D-S548A 0.297505638925836 S528A-G564A 0.297387083969571 L3054D-A2059C 0.297051595002704 R1329B-A2293C 0.296916123833644 I3053D-V2102C 0.296630715914955 I525A-S548A 0.296626689610358 G1520B-S559A 0.296440620119492 Y3052D-V2063C 0.296058537418352 L3054D-V2099C 0.295940929833981 S1296B-G1332B 0.295450831836055 L1326B-A2297C 0.295005193832847 L2292C-A2297C 0.294980266279264 A3061D-G2096C 0.29446111712813 S2832D-G2844D 0.293940014183406 W2850D-S2093C 0.292891315784191 C2823D-V751A 0.292799829084157 G1318B-S557A 0.292088178388162 G3057D-I2098C 0.291951568965224 S2832D-G2864D 0.291358952483431 S2861D-I2866D 0.29126163578057 G1333B-M2089C 0.290341285988093 S2863D-M758A 0.289965944389154 A3065D-L2094C 0.289935706054001 G564A-F569A 0.289468678498906 S2839D-P2859D 0.289456522462725 L1518B-G560A 0.288954918215079 L1301B-M2294C 0.288109073136417 L3058D-V2066C 0.288092301362376 L531A-G560A 0.287863093202736 W1335B-L2286C 0.287842646010221 S2064C-G2076C 0.287555056046788 A1529B-L558A 0.287148665879978 S1296B-G1308B 0.286935562714417 G1333B-Y2284C 0.286224942506829 L1518B-V563A 0.286146401300298 L756A-A761A 0.286097013868115 I1293B-A1319B 0.285954086851762 T1339B-W568A 0.284953464035666 L1326B-A2293C 0.284559612963166 R1329B-S2084C 0.284246228012143 C1287B-F1337B 0.284104605520782 M1321B-G564A 0.283354695786783 L2862D-A761A 0.282860353418252 M3062D-L2069C 0.282780872181674 V2063C-F2083C 0.282439502805877 G2864D-L545A 0.281636658328329 C519A-T571A 0.281109118409731 A1291B-L2286C 0.280722305702415 S1316B-G564A 0.279862002501991 V3055D-V2102C 0.279796707980692 L3060D-A3065D 0.279696562374959 G2062C-G2096C 0.279230965916266 V1295B-V2287C 0.278951513365416 V1289B-V1295B 0.278267844593763 I1284B-V1289B 0.277299051209139 E3068D-G2096C 0.276281015095132 G1521B-L531A 0.275653020431686 F2836D-W2850D 0.274469541049726 P2859D-S548A 0.274051760408338 A1525B-G526A 0.273980483994967 V2867D-V751A 0.273581871223914 L1317B-P555A 0.273283613632083 A1291B-F2283C 0.273033507902891 M1526B-V534A 0.272507520887523 G2869D-Y748A 0.272458058234168 V2870D-V751A 0.272427283235536 S2863D-G752A 0.272223257860719 C1287B-T1339B 0.271989496172798 V1302B-V2296C 0.271449170065516 M1526B-V530A 0.271278096530209 C519A-Y524A 0.270502152323412 R1329B-L2081C 0.269832175445194 M2857D-R2092C 0.26906370785299 V1519B-V527A 0.268517854553952 A3061D-L3066D 0.267291623372565 V2825D-V2831D 0.266867921118885 G2844D-S2852D 0.265446504497271 V3055D-V2063C 0.264778230311463 G526A-S544A 0.264107356685367 A2855D-R2092C 0.263891341922995 N2847D-R2097C 0.263609438609821 S1325B-N2079C 0.263187705146976 M1286B-A1291B 0.262686320968047 L1524B-I562A 0.262651751558232 V1334B-V2282C 0.262210554074395 M1321B-G565A 0.262105303777236 L1326B-G2289C 0.261832244439803 L1524B-A1529B 0.261032281015061 G1328B-G2086C 0.260904452063157 G3057D-W2104C 0.260610222395928 S2080C-L2085C 0.259819329425794 G2062C-S2084C 0.259731032038082 V2867D-L750A 0.259313680442705 G2830D-G2868D 0.258311099744499 G3049D-F2105C 0.258006841689852 V1295B-L2290C 0.25748484931588 G2289C-A2297C 0.257262874017067 W1336B-G2289C 0.257161718920262 G3057D-F2106C 0.257095205711823 S1327B-L2298C 0.257085268471226 F1338B-G2289C 0.256800443583175 W2053C-T2107C 0.256612290931112 C2055C-T2107C 0.255880256106196 G2062C-L2069C 0.255703356199994 G1513B-F569A 0.255636059233111 G753A-A761A 0.255196587399155 L531A-S559A 0.254375830796912 A1529B-R556A 0.254280232501879 S528A-S548A 0.253165951885867 W517A-T571A 0.252215456725497 M2857D-V2102C 0.252153982948882 S2861D-G2869D 0.251468138925738 S2861D-L549A 0.251428999160499 A3061D-G2101C 0.250349714204891 G1294B-F2283C 0.250177231982351 E3068D-V2070C 0.249508654204406 L2835D-S2863D 0.248738817097505 G1521B-A523A 0.24724658730451 Q2858D-G2086C 0.247179239806961 T1339B-T2107C 0.246872144254717 G2830D-S2852D 0.246252206147062 G745A-G753A 0.245144675787778 G1521B-A1529B 0.244875433581357 F3051D-G2062C 0.24399802221424 G2830D-F747A 0.243572286677892 L1299B-G2291C 0.241627363263997 F2068C-G2086C 0.241436122235462 R2865D-M758A 0.241277784359907 A3061D-R2097C 0.240675329501852 G1294B-S1312B 0.240204694222976 G550A-G565A 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