[Wed Aug 24 17:35:56 2016] >Input file: TM5AYNATD.pdb >TM segments: A16-35_A45-62_A80-100_A110-134_A247-266_A280-298_A312-331_A336-356_A376-396_A402-420 MAIDEN score = -98.7793 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- P260A-R284A 10 L322A-I344A 1.2220645664749 K54A-L387A 1.13390483841915 Q84A-L128A 1.10070938823804 S294A-V349A 0.972928594656395 F298A-H314A 0.942322453763092 F329A-V337A 0.940662063320973 F94A-L119A 0.885612907532388 L255A-L389A 0.876270363492264 L315A-L351A 0.867958714064203 V326A-F340A 0.862356443022795 A251A-T382A 0.860873440810157 W254A-L389A 0.817948411572969 L258A-I344A 0.816439468928074 I293A-V349A 0.771264258367258 L322A-C343A 0.770396900151973 F58A-L380A 0.744084640394921 L315A-F354A 0.73520803651831 Q318A-V349A 0.726255612257193 L258A-L265A 0.725481989322637 V53A-L121A 0.723745185553745 L258A-V406A 0.723656663841213 L322A-L410A 0.709722526428465 K54A-V124A 0.69723825353291 L98A-L112A 0.694461909632696 F290A-L345A 0.691051263432255 F94A-L115A 0.688327985896165 L98A-L115A 0.682390747662486 L253A-V413A 0.661430478866405 L252A-A385A 0.657353373339364 F290A-V349A 0.649386941510866 G80A-S130A 0.636506786975455 V257A-L265A 0.63488751083513 V257A-L264A 0.634011986863145 P260A-L286A 0.627953859717838 P62A-L380A 0.610371251807894 L253A-A416A 0.597239162840205 A325A-L341A 0.596042020515622 P260A-F283A 0.591996868500832 V326A-Y407A 0.585572665787348 L252A-V413A 0.578673006325511 I52A-V124A 0.565001161868931 T61A-L380A 0.558380452760623 F85A-A126A 0.555882495403222 Y250A-T382A 0.551816351862744 L265A-F402A 0.547553005074797 F94A-A118A 0.546477018353726 S256A-L410A 0.545375465116098 T321A-I344A 0.536821081967659 F283A-L341A 0.529985353357591 L255A-A412A 0.519342584227143 A328A-V337A 0.518226901924427 F94A-D99A 0.517643094088995 I247A-T381A 0.510566558777143 F329A-F340A 0.50884287767253 Q318A-V413A 0.502791249794886 L98A-F116A 0.502515349146281 L396A-F402A 0.497761502828216 F58A-S384A 0.4955925386734 S256A-L389A 0.493411075643368 F329A-S336A 0.492857268094655 P62A-L377A 0.491223164245263 R312A-N417A 0.48551197942516 L258A-S409A 0.483561098966844 S259A-L265A 0.482938844048268 D24A-F29A 0.482805591014125 I52A-L121A 0.478854454961805 V257A-L405A 0.478408149018757 S256A-V408A 0.475687935219694 L264A-F402A 0.46634457818 S249A-L415A 0.466194827670644 T295A-Y352A 0.459857302744398 F58A-T383A 0.458155020128417 M97A-L115A 0.455621184029777 L255A-I388A 0.455551484552527 P260A-I344A 0.454834122871501 R312A-F354A 0.453080137137734 S256A-L405A 0.452286161478454 S256A-V406A 0.451516536874704 Y250A-A416A 0.44678243186215 V53A-V124A 0.438410709121976 S256A-V413A 0.434084149105148 H314A-L351A 0.43184018808475 L255A-S409A 0.427930122816835 A328A-V339A 0.426192149106319 K54A-Q131A 0.425588955562146 Y50A-A120A 0.424562480133742 F290A-L346A 0.422418136757404 S294A-G350A 0.420513671398477 R284A-C343A 0.420222121349416 L292A-V349A 0.41364713804898 P260A-L345A 0.413145794128014 V257A-L389A 0.409686113004956 S259A-L345A 0.409580529261 I88A-G123A 0.40659696376138 F94A-F116A 0.404805771145447 L255A-T386A 0.400730756663329 R284A-L345A 0.397911606393798 R312A-F420A 0.397482160497283 Q318A-L346A 0.392900481339521 F95A-L119A 0.392580221584944 S256A-A412A 0.386811814019404 L286A-L345A 0.386646413803928 A90A-L119A 0.386448901370228 I52A-A120A 0.384109055855988 L248A-A416A 0.382188996578161 V81A-T133A 0.380146106542505 L248A-T381A 0.376141553220165 I324A-F340A 0.369768793765296 T61A-S379A 0.362748415133764 G319A-Y352A 0.360737177152369 S256A-H261A 0.360461624346335 L83A-A126A 0.360192268406783 F283A-L345A 0.359543376554745 W254A-V413A 0.358417836866464 Y250A-G316A 0.357602207896629 Y352A-V413A 0.356453566564864 P260A-L265A 0.355511768132518 L253A-A412A 0.35491128445508 T61A-L377A 0.353477630936845 A266A-I280A 0.352120568416133 L252A-T382A 0.351438293906035 L322A-S347A 0.351300440669403 A87A-M125A 0.343870769017123 A87A-G123A 0.343541486117141 T61A-L128A 0.338457715173902 V81A-S130A 0.336236335054727 A251A-S378A 0.333817920742077 W82A-A87A 0.329960230639259 A34A-G91A 0.328592868813962 G323A-A412A 0.32598933945053 I280A-C343A 0.323744130222406 L83A-M125A 0.323708252897726 V30A-Y49A 0.323212996030301 L248A-S378A 0.316638649019414 C343A-G350A 0.315665475484512 H261A-A266A 0.315546718006776 R21A-D134A 0.315149846580381 L264A-G393A 0.313867308637383 S256A-A416A 0.311171473267927 A325A-S409A 0.310305482830611 L248A-V419A 0.309808968959609 Q84A-S127A 0.304699015888225 Y250A-G319A 0.304624833520992 S249A-F420A 0.302134758422957 A392A-L405A 0.300390837359282 F317A-S347A 0.299315023723663 G287A-S294A 0.296727326353188 L60A-L128A 0.295938661527351 S249A-A385A 0.295256241613449 Q84A-L89A 0.295132372740387 Y250A-S355A 0.286180704038138 G56A-L387A 0.286008823175727 L346A-G353A 0.285272116181832 M331A-S336A 0.285190776289164 Q84A-A126A 0.283872824694994 S259A-G342A 0.282564138721337 G285A-G342A 0.282459263559787 G319A-G353A 0.282281790497965 L255A-G262A 0.282118096254501 T57A-M125A 0.281868975557923 S259A-G291A 0.277844315458518 G323A-L410A 0.277053613253156 G100A-L115A 0.276361021565379 S259A-G285A 0.274079786824161 Y250A-F354A 0.273236649915411 I324A-C343A 0.27245336455745 F298A-F354A 0.271741849497158 H314A-F354A 0.271664676196995 V257A-S409A 0.271590001339953 L258A-G323A 0.270535883674917 L258A-G287A 0.270418897294402 L35A-G96A 0.269390211001599 G56A-L380A 0.267678701845235 V53A-S127A 0.267093354373761 F86A-A126A 0.266708201280792 M125A-D134A 0.26653386142605 A330A-K403A 0.265070354956187 T295A-G353A 0.264879604438412 G323A-G342A 0.263926017691163 V31A-M97A 0.263719025278093 G80A-Q131A 0.26331667572831 V326A-V406A 0.263286249389509 L252A-L415A 0.26320797260071 G287A-L345A 0.262934183985936 S259A-R348A 0.261459148797003 L253A-S409A 0.261233448164818 W254A-G262A 0.260820358247434 L292A-S297A 0.26038822073783 L35A-V45A 0.257047777636566 Q25A-S127A 0.256917634708174 V326A-L410A 0.254297244932176 K403A-A411A 0.253669469146611 S256A-Y404A 0.252824384410419 G96A-F116A 0.252425551571564 G56A-Q131A 0.251017353164389 G123A-Q131A 0.250068287763233 W254A-T386A 0.24969798267079 L322A-S409A 0.249318551709336 G350A-N417A 0.248376866877749 L315A-A416A 0.248370552462792 A47A-A120A 0.248215584859358 Q318A-G350A 0.247895702391042 F85A-G123A 0.247360305706398 S259A-A325A 0.247041457779304 I55A-L387A 0.24684965765498 R348A-G353A 0.24653086326132 P62A-T382A 0.246514558719089 L258A-G342A 0.246201530795291 F95A-G123A 0.245879856258464 T61A-T133A 0.245393686817707 A47A-G393A 0.244463822490163 G56A-S384A 0.244313475578337 G319A-F354A 0.242638333284364 F298A-N356A 0.241876295833679 S297A-V349A 0.238936757733016 P260A-Y352A 0.238074598442867 G319A-N417A 0.236650015160419 P260A-G285A 0.236368076329608 L292A-G350A 0.236340914272642 H261A-G291A 0.236192668206151 L258A-T321A 0.235673221870524 H261A-C343A 0.235349464856357 Q318A-G342A 0.234745995533666 G291A-Q318A 0.233083097443131 T321A-L414A 0.23293662694519 G323A-G350A 0.232665185388172 T295A-L351A 0.23243585932187 W313A-G350A 0.232434850966331 S259A-L341A 0.231431471204695 I88A-A126A 0.229439332676318 V257A-I388A 0.229264519250426 S256A-S394A 0.229045082701594 W82A-G129A 0.227819830866655 R348A-N356A 0.227425038289599 S256A-S355A 0.227374163930159 Q318A-N417A 0.226287794964075 S130A-S378A 0.225456075854342 I280A-V337A 0.223702320407483 T57A-S127A 0.22360990804796 L128A-T383A 0.22028096513297 A251A-F354A 0.220251079772991 A385A-S409A 0.219881958936094 D28A-G123A 0.21895982149462 T57A-L387A 0.217675979126041 P260A-Y338A 0.217245393082768 D24A-V31A 0.216725932333856 T321A-L346A 0.216507580345597 L60A-T383A 0.215120606610052 G262A-I344A 0.213729305635636 G16A-V81A 0.213646135662453 Q25A-Q131A 0.213521665494661 A330A-F402A 0.212875475828586 F33A-V45A 0.212526580203527 S113A-S122A 0.210761029235336 G287A-L351A 0.210488384727112 A46A-K54A 0.210184179281445 K54A-S130A 0.210152714232486 P62A-Q131A 0.209719159731884 Y49A-V114A 0.209205336532313 A251A-S376A 0.208763733386028 V263A-S394A 0.208142540609498 G262A-F390A 0.207847086992571 V30A-Y50A 0.207534926414438 F329A-K403A 0.207517400666337 W254A-H261A 0.207075349277454 G285A-C343A 0.207020278623178 V289A-V349A 0.20678244777937 P32A-S122A 0.205722162456071 L51A-L387A 0.205189534861001 W27A-G123A 0.204680245538223 A266A-K403A 0.204662031995918 G319A-L410A 0.203938192620835 L315A-G353A 0.201786191573328 G262A-C343A 0.201520911797908 R17A-V81A 0.200054320420148 L253A-L351A 0.199945562437273 R312A-N356A 0.199837546192522 V257A-L410A 0.199609084560776 M331A-V406A 0.199549863784084 P260A-G350A 0.199073953952971 L258A-V326A 0.198319053676826 I247A-L377A 0.197887792530809 Y49A-K54A 0.194671098414129 H314A-R348A 0.194355137157138 A325A-I344A 0.194045539332842 L258A-S347A 0.193437073640304 I247A-W254A 0.192915270123302 A47A-T386A 0.192441302510692 P62A-S130A 0.191466623239724 T57A-T133A 0.190916096672114 S294A-R348A 0.190354189396558 P62A-L128A 0.188995517615552 T327A-A411A 0.18701058659916 G323A-N417A 0.186814927333055 T61A-A126A 0.186480287907551 W313A-F354A 0.184969350369083 N356A-S379A 0.184461526875923 L19A-D24A 0.184013858673046 S391A-S409A 0.183726298098678 S249A-A416A 0.181634985635725 M331A-Y407A 0.180222037336828 G323A-L345A 0.179535386771599 G316A-N417A 0.179338314272021 G319A-Y407A 0.178466041707278 G350A-L414A 0.177917738786926 T20A-G129A 0.177560315156259 G287A-R348A 0.177466651181531 L248A-S376A 0.176805013140517 A392A-S409A 0.176081527839361 S127A-L380A 0.176023639788819 G262A-L286A 0.175380595024495 D28A-K54A 0.174706047536886 G323A-M331A 0.174612420090981 L60A-S384A 0.174549867879516 P260A-Q318A 0.174202767786652 Y50A-S394A 0.173623085324719 I88A-A120A 0.173344486595855 G56A-L121A 0.171870140121793 V320A-V339A 0.171125623188933 K54A-L59A 0.169773356645985 T57A-Q84A 0.1692607231381 V263A-F402A 0.169196751034274 P32A-S127A 0.168564289890812 F290A-Q318A 0.167640607771374 F33A-A47A 0.167178625118205 I55A-G123A 0.167094393027448 Y49A-F94A 0.167047532038926 I88A-S122A 0.166982046842167 G319A-V349A 0.166918892114942 V320A-V418A 0.166143378706773 S297A-R348A 0.166081050314712 T382A-A416A 0.165318382374613 A266A-V406A 0.164603954138871 T57A-A385A 0.164227294554792 C343A-V406A 0.163508987030651 A251A-G319A 0.162332096586871 A47A-G262A 0.161959928869053 F317A-V349A 0.160928024601438 Y250A-H314A 0.160790306093193 S249A-L377A 0.16048253228462 W254A-A385A 0.160392096046691 L292A-Y352A 0.160282119185 S259A-S355A 0.160036330287771 V320A-A412A 0.159849275215333 L60A-G123A 0.159747803154551 S127A-S384A 0.159436038222756 L253A-T381A 0.159050255790651 G262A-G342A 0.158853362566819 D28A-A126A 0.158720284722916 T20A-W82A 0.15838682611242 G316A-C343A 0.158019458784834 Y49A-L119A 0.158006885940662 Q131A-S379A 0.157805534620391 S259A-F402A 0.157704738103181 G23A-G123A 0.157418012295373 W313A-L414A 0.157288357706078 G323A-V339A 0.156820848141327 V31A-D99A 0.156786814900354 S256A-V263A 0.156504298187929 A385A-V408A 0.156313329508354 T20A-D28A 0.155593421049149 Y50A-G393A 0.155581324365289 D24A-T133A 0.155404427596945 Q84A-M92A 0.155002120076094 I52A-A118A 0.154934809996302 W254A-T382A 0.154634082400185 A47A-V263A 0.154128508215713 W27A-S127A 0.153393070691135 F58A-S130A 0.153371308825165 W313A-S347A 0.153025819367415 W254A-L315A 0.153022484377046 L265A-V406A 0.152941489808329 G393A-V406A 0.15231383844579 G16A-G23A 0.152289763029944 Q131A-T381A 0.151857048398821 G291A-C343A 0.151720102173295 V320A-S347A 0.151457785862894 H314A-V349A 0.151046519937454 S294A-W313A 0.150871340719817 W254A-R348A 0.150809856350158 V320A-R348A 0.150722125783696 W313A-T321A 0.150401695570971 A87A-I117A 0.150130941879518 R21A-A126A 0.150036161384094 F283A-S347A 0.150018419238269 S256A-R348A 0.148926718886402 G319A-L414A 0.148820877918949 H261A-V289A 0.148487028944283 I324A-A411A 0.148022107941198 T321A-A411A 0.147951963070363 Q318A-L414A 0.147906768251838 T295A-H314A 0.147682928857717 H261A-F340A 0.146917008515946 T20A-Q131A 0.146705632527442 L322A-Y338A 0.146333519766036 Q25A-A126A 0.145971237473697 V289A-S294A 0.145852295749074 V320A-V406A 0.14571758465634 F298A-S347A 0.145638959869426 G319A-S347A 0.145517181187858 G262A-T386A 0.145057648483916 S256A-G319A 0.14482101568374 V30A-V45A 0.144397597031004 W254A-S379A 0.14420159197198 G262A-L405A 0.143837367072906 T20A-G80A 0.143419602082669 Q318A-R348A 0.142137882097076 L292A-R348A 0.142048298298615 I344A-V349A 0.141923689054531 F390A-S409A 0.141628117765045 V289A-C343A 0.141563359625808 W254A-S378A 0.141399802539317 V326A-A412A 0.140852202865113 I324A-V337A 0.140536249287459 D28A-Y49A 0.139764846273096 S297A-G353A 0.139668099115514 Y49A-M92A 0.139628285600134 G91A-S127A 0.139046647009796 G262A-G281A 0.138764696872872 Y50A-L128A 0.137836910792465 S127A-T383A 0.137538334686954 T61A-S384A 0.137499868013871 L265A-Y407A 0.137329714670117 Y49A-M125A 0.137238614466274 S22A-V30A 0.137098034835667 I55A-I388A 0.136828482755774 L253A-Y407A 0.136749170379685 D28A-M125A 0.136216101344144 G96A-G123A 0.136172910830166 L19A-W27A 0.136016342735773 A385A-V413A 0.135831892982477 G319A-T327A 0.135780796421103 L128A-L377A 0.135343121483271 G262A-R348A 0.135237532286212 L286A-Y338A 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