[Mon Aug 29 16:43:50 2016] >Input file: TMA0A024QYR8M1G.pdb >TM segments: 66-102 MAIDEN score = 3.4133 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- P75 -L96 1.97161744021824 T79 -P92 1.37110808262176 Y76 -N95 0.807824623676584 V73 -F101 0.805060286622812 L96 -F101 0.702611681078418 V70 -E77 0.685887940809827 Y76 -L96 0.618686520513381 V73 -Q98 0.518834108558576 V73 -L96 0.467891510221758 L74 -E94 0.46721577831994 A80 -P92 0.465765675595849 F81 -R91 0.452888152793862 C84 -R91 0.409160192729876 V73 -G97 0.401417502698182 S69 -Y76 0.393227701139997 L74 -Q98 0.390278942714195 Y76 -S93 0.376731820527464 L74 -L96 0.375511237568998 S69 -P92 0.345459600544451 E71 -G102 0.309020789669413 L74 -G97 0.302508449256029 V70 -Y76 0.294003204427424 S72 -G97 0.266032093279983 R66 -E77 0.264944170459733 E77 -L96 0.260752495063993 S69 -N95 0.239979186983783 D82 -G89 0.224186595235303 V70 -L96 0.20810366258655 D68 -Y78 0.186221985216404 Y78 -G89 0.1757548243517 Y76 -G102 0.174849484258334 L74 -F101 0.172665418398982 T79 -K90 0.171536348945762 A86 -R91 0.163748650723175 D68 -T79 0.160898390289568 V70 -S93 0.13749390717001 L74 -V99 0.129347031173473 L67 -Y78 0.124641657038335 S69 -T79 0.123877461408616 Y78 -R91 0.116330011947465 E94 -G102 0.115915820346475 S72 -N95 0.114332723623614 E77 -P92 0.113325927294532 Y78 -S93 0.107499223981394 D68 -L74 0.101361749624477 T79 -G89 0.101257251300861 L67 -L96 0.100899611253604 D68 -E94 0.100056165985653 P75 -E94 0.0913650515715356 P75 -Q98 0.0893634876915179 E71 -E94 0.0882872812642759 A80 -S87 0.0870798030845004 E77 -K90 0.0858051051117052 D82 -P92 0.0855140476349625 Q85 -K90 0.0808351527993305 P75 -L100 0.0793949286790543 F81 -A86 0.0776972838528138 R66 -S72 0.0761116334079084 R66 -V73 0.0750486485397361 A80 -A86 0.0742649748626625 L74 -G102 0.0725371769551089 E71 -G97 0.0725103840300763 E77 -G97 0.0652507059708394 T79 -R91 0.0562545685705613 S69 -Q98 0.055945199156954 S69 -S93 0.0554985321756367 S72 -E77 0.0538241190757622 S69 -G97 0.0536323342167127 L67 -Y76 0.0533921420490202 E77 -R91 0.048537790817174 P75 -G102 0.0476651951292495 T79 -E88 0.0456721909118789 V70 -Q98 0.0392607163125689 S93 -F101 0.0379227777573199 E94 -L100 0.0378208996768565 E71 -Q98 0.0360907791630409 S72 -L100 0.0347717438483901 Y76 -R91 0.0345537411167642 V73 -G102 0.0333075812441077 P92 -F101 0.0327717334219346 F83 -E88 0.0308065175410761 E77 -F101 0.0300083210916235 V70 -Y78 0.0296962272916321 E77 -G102 0.027747377270082 Y78 -E88 0.0267725388765676 D68 -N95 0.0224456921517193 L74 -T79 0.0201196855996431 N95 -G102 0.0190866500807769 S69 -G102 0.0163520493351523 L74 -N95 0.0134479572182675 D68 -S93 0.0123090884000925 L67 -P75 0.00889462494438931 D82 -S93 0.00859975737902202 E71 -F101 0.00695534681692656 S69 -P75 0.00519646085234982 F81 -S87 0.00478676777111753 R66 -E71 0.00342488423258525 A80 -Q85 0.000379112947662463 V70 -T79 -0.000508364566066066 P75 -P92 -0.00204684516646381 L67 -T79 -0.00354349119570996 F83 -P92 -0.00498629307859447 R66 -N95 -0.00659097018720489 P75 -G97 -0.00978137814454438 S69 -F101 -0.0101546844849385 F83 -R91 -0.0104392468372896 E71 -N95 -0.0127689979183003 Y76 -E94 -0.0142726608058172 F81 -E94 -0.0151006308001557 D68 -E77 -0.0157615893453484 E71 -L96 -0.0163560291199047 V70 -P75 -0.0174669407819319 V70 -G102 -0.0193360232896529 E77 -Q98 -0.020787914288097 V70 -F101 -0.0211285272385519 S69 -E94 -0.0292394403709197 N95 -F101 -0.0313964134997868 D82 -S87 -0.0334128547523449 S72 -V99 -0.0365768839305742 F83 -K90 -0.0388142819546404 Y76 -Q98 -0.0427441803163122 L74 -P92 -0.044420423056545 T79 -E94 -0.046580873198558 P75 -F101 -0.0466765381383016 R66 -T79 -0.052012533315252 S72 -Q98 -0.0542087024399844 Y78 -L96 -0.0562098876613151 Q85 -R91 -0.0566064708152922 D68 -P92 -0.0586391188734245 S72 -E94 -0.0597510405699009 R66 -L96 -0.0609602082746116 P75 -V99 -0.061115705686412 V73 -N95 -0.0633720329014383 E88 -S93 -0.0646185565616788 D68 -G102 -0.0649588847900975 S72 -Y78 -0.0649631871787882 T79 -N95 -0.0652600925689515 E77 -S93 -0.0663925721636237 S72 -F101 -0.0698052466502654 A80 -E94 -0.0711197641564261 V73 -Y78 -0.0729944986311346 R66 -Y76 -0.0735919878263189 V70 -P92 -0.0747263216255976 Y76 -V99 -0.0765724095331946 Y76 -L100 -0.0767391851421646 S72 -G102 -0.0799885019870255 S69 -Y78 -0.0822443744495258 D68 -L96 -0.0850178356132635 Y76 -G97 -0.0909797794848446 F81 -P92 -0.0911704011295305 D82 -E88 -0.0939061170151442 R66 -E94 -0.0954552973728 D82 -R91 -0.0990912663864238 C84 -K90 -0.100359928751344 E77 -N95 -0.103563475572697 R66 -L74 -0.108697812728727 V73 -S93 -0.109853029867375 L67 -V73 -0.109894389499905 P75 -S93 -0.113206766734804 E71 -Y78 -0.113330817623867 F81 -S93 -0.113849689763092 E94 -V99 -0.116729451158035 F83 -G89 -0.121477141383847 E71 -Y76 -0.121803020572878 V70 -G97 -0.122695207860888 N95 -L100 -0.126934284219238 Y78 -K90 -0.129897516107358 P75 -N95 -0.13396559453416 R66 -Y78 -0.137142492653729 L67 -N95 -0.141235169852525 Y76 -P92 -0.151970346267332 S69 -L74 -0.160939084062407 F81 -G89 -0.162689285522189 Y76 -F101 -0.163052501023554 L74 -L100 -0.163622387464605 L67 -E94 -0.16603012824982 G97 -G102 -0.166580547742177 T79 -S93 -0.16698946968834 S87 -P92 -0.171467843300026 D68 -Y76 -0.183956947421983 L67 -L74 -0.189305073939063 S69 -L96 -0.199153449257578 E71 -E77 -0.202359805664856 S69 -E77 -0.202960375197585 L67 -E77 -0.206370094146907 A80 -S93 -0.206881582736386 L74 -S93 -0.219399304321013 F81 -K90 -0.228329640018032 F81 -E88 -0.228997724570863 V73 -V99 -0.234385151223244 Y78 -P92 -0.238633465305821 L96 -G102 -0.24323517794104 Y78 -N95 -0.245040680223811 A80 -E88 -0.24698822700522 A80 -K90 -0.258842950131066 V73 -E94 -0.280320832003609 D68 -P75 -0.290734610974104 D68 -V73 -0.299321672803559 D82 -K90 -0.306907896435512 S72 -L96 -0.319182197841063 V70 -N95 -0.325257157641109 C84 -G89 -0.337515338948043 V70 -E94 -0.340230055550259 L67 -S72 -0.351886976312298 R66 -P75 -0.359843989099682 Y78 -E94 -0.388090171121013 V73 -L100 -0.405286232745056 E94 -F101 -0.458690283713448 A80 -G89 -0.477551452779214 E77 -E94 -0.605526226374917 A80 -R91 -0.707923430379384