[Mon Aug 29 16:45:28 2016] >Input file: TMA0A024R2L3M1G.pdb >TM segments: 79-103 MAIDEN score = -2.3827 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L96 -V102 0.737666093928455 F97 -V102 0.708183436127085 R98 -L103 0.613355833106382 F91 -F97 0.541809362109681 F91 -L96 0.522698001816577 V94 -V102 0.349419450658866 C83 -F91 0.311133074386603 D84 -L89 0.263885878052038 V94 -F99 0.205670367187621 H95 -Y100 0.204328586849541 V79 -M87 0.191073518092284 I82 -M87 0.182528242512538 H95 -V102 0.15761670308931 F91 -Y100 0.133243932057985 A90 -R98 0.128844009227485 L93 -L103 0.116309339301994 L89 -L96 0.116094890953702 A90 -L96 0.0955886664197454 Y92 -V102 0.0871255903045804 M87 -L93 0.0866100566675594 A90 -V102 0.0833526799595603 H95 -R101 0.0827319076143986 L85 -Y92 0.0684385355990242 L85 -F97 0.0668647275528169 V79 -I88 0.0618484177885179 I88 -F99 0.0607623799528079 I88 -V94 0.0603341814811396 C83 -A90 0.0543590269005765 A90 -R101 0.0491894708692264 H95 -L103 0.0452831668006399 M87 -F99 0.0434441937532301 A90 -L103 0.0397760448568665 L93 -R101 0.033684242018186 T81 -L89 0.0329815187066158 L85 -A90 0.00415037260669426 L89 -V94 0.00324109233647896 V80 -L89 0.00256433037035642 F91 -R101 -0.00423845371791887 V79 -I86 -0.0138127514172224 I82 -A90 -0.0157148373284548 L96 -R101 -0.0169992263145518 M87 -F97 -0.0207331648513456 T81 -A90 -0.0250040654085524 V94 -R101 -0.0354628332397287 V80 -I88 -0.0360342301482337 I86 -L93 -0.0406324807903573 Y92 -F99 -0.0468495036152707 L89 -V102 -0.0484224712548205 I88 -R98 -0.0500808345102126 I88 -H95 -0.055879179768862 D84 -F91 -0.0589257688042404 L89 -F97 -0.0590357894199398 I88 -L93 -0.0596565446266095 M87 -R98 -0.0609260308773338 I82 -L89 -0.062515195225322 F91 -R98 -0.0634101684311925 Y92 -L103 -0.0648031981846666 L85 -F91 -0.0674755124092528 I86 -Y92 -0.0724645847961307 Y92 -R101 -0.0764822929272682 M87 -V102 -0.0827488390601516 V94 -Y100 -0.0843436151614223 L93 -F99 -0.085318650411466 M87 -L96 -0.0909300669800592 I86 -F97 -0.094910097768262 Y92 -R98 -0.0962776344729601 T81 -M87 -0.101389329089956 A90 -F99 -0.104218926165423 L89 -R98 -0.106098236216231 M87 -Y92 -0.109163245985767 L93 -R98 -0.109938738315203 D84 -A90 -0.111471587272941 D84 -F97 -0.114296961792786 I88 -V102 -0.123896668815904 V79 -D84 -0.126202379063754 I88 -L96 -0.135222121802077 F91 -L103 -0.141089391312919 M87 -V94 -0.145692146585035 F97 -L103 -0.149129411198736 F91 -F99 -0.15625593908648 V80 -I86 -0.170409379957527 I88 -F97 -0.178266446591513 V94 -L103 -0.182384607881133 Y92 -F97 -0.186746338608983 V79 -L85 -0.192037977067813 V80 -M87 -0.194254668356797 A90 -F97 -0.202496645028189 T81 -I86 -0.206488445804804 A90 -H95 -0.210041620330658 L96 -L103 -0.217090256169133 L93 -V102 -0.219322855922417 L89 -H95 -0.247626991954644 M87 -H95 -0.248140983265273 I86 -F91 -0.255166939177233 F91 -V102 -0.263897277638106 T81 -I88 -0.279362204866311 V80 -L85 -0.291470466024043 D84 -Y92 -0.292187292359467 I82 -I88 -0.298904183588024 C83 -L89 -0.516388619596975 C83 -I88 -0.752102612692076