[Mon Aug 29 16:46:40 2016] >Input file: TMA0A024R5L4M1G.pdb >TM segments: 89-108 MAIDEN score = -1.7201 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- A99 -N104 0.646164619065177 D103 -E108 0.40900132049284 K93 -S102 0.333511692773163 Y101 -S106 0.332941377035258 D98 -K107 0.227653705268965 K93 -Y101 0.224376761694158 D98 -D103 0.223020947210489 V96 -Y101 0.201228011749189 F95 -N104 0.159232560010195 D92 -I97 0.151081400158816 L100 -I105 0.149967884536228 K93 -D103 0.149210754512174 D98 -I105 0.145165181710544 I97 -D103 0.139979557994682 V96 -S102 0.126868834940844 I97 -S102 0.113727753293638 I97 -I105 0.104833551794219 V89 -A99 0.090285980021942 V89 -L94 0.0609295137588646 D92 -A99 0.0605233741742977 T91 -D98 0.0556995142584027 A99 -E108 0.0549779863857633 V90 -D98 0.0278249222527336 T91 -A99 0.020436044744494 D92 -S102 0.0203595965474994 D98 -N104 0.0147698843060495 I97 -S106 0.0129814483548119 D92 -L100 0.00619691988980042 K93 -A99 -0.00467934411805926 F95 -S102 -0.00845097813634954 L94 -D103 -0.0113598908027139 A99 -K107 -0.0148634764080868 V96 -S106 -0.0193004316301519 F95 -S106 -0.0203279967042789 S102 -E108 -0.0211552967823039 V96 -N104 -0.0230391190219508 V96 -I105 -0.0259618495930416 D98 -S106 -0.0282315272452144 V90 -A99 -0.0526831051892822 V90 -I97 -0.0564543231979204 A99 -I105 -0.0666105078690116 K93 -D98 -0.0740524991619838 T91 -I97 -0.0946868653781703 F95 -L100 -0.104061389237116 F95 -D103 -0.10951056010715 D98 -E108 -0.109927972390003 V89 -I97 -0.111884535022025 Y101 -K107 -0.128789292340433 V90 -F95 -0.135361646156035 L94 -L100 -0.136803818511529 F95 -I105 -0.141432342368055 L94 -Y101 -0.162465377923998 S102 -K107 -0.169975579871417 K93 -L100 -0.170260574362965 Y101 -E108 -0.172680195666295 L94 -S102 -0.174908854802513 F95 -Y101 -0.179368914816435 V89 -D98 -0.182730001434765 L100 -E108 -0.188004910852386 V89 -V96 -0.189494583081709 D92 -D98 -0.192125385405076 A99 -S106 -0.195200094481555 L100 -K107 -0.195201554033287 T91 -V96 -0.197783975926721 L94 -A99 -0.230962277731059 D92 -Y101 -0.244139491940019 V96 -D103 -0.288171237213251 L100 -S106 -0.315847751367175 I97 -N104 -0.318210021128841 V90 -V96 -0.353050851755123 V89 -F95 -0.362843630082166