[Fri Aug 26 16:36:07 2016] >Input file: TMA0A024R730M1D.pdb >TM segments: 398-410_ 427-442_ 520-542_ 545-564 MAIDEN score = 11.9828 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- T398 -K442 10 I521 -L526 1.24729559617472 L541 -I546 1.20337756343155 C524 -R555 1.19256650152466 F400 -P439 1.025402062938 T398 -L441 0.995920917013075 I530 -K536 0.876311160954097 F400 -V440 0.847762581287988 E403 -L408 0.812962037441224 F400 -T438 0.810806773028119 W401 -V440 0.769877771719453 L526 -Q552 0.635498506061985 F533 -I539 0.628111492908459 D529 -Q552 0.562378200719936 V540 -I546 0.550469089042154 C524 -L558 0.533667601951517 A399 -K442 0.522782815990619 L526 -I556 0.461824203072033 F400 -L441 0.459008013590252 I521 -R560 0.455938057123458 E402 -T438 0.448242977881604 G542 -T547 0.443060976325044 K532 -Q552 0.407102651717584 L541 -T547 0.396632013080014 E528 -K536 0.393358285902466 V520 -R560 0.382543274848773 R553 -L558 0.367393505155073 D529 -R553 0.353309286664696 I539 -I546 0.341905389914295 C524 -G551 0.332204049298071 K532 -S549 0.298932870445142 V520 -D537 0.273026600757313 D529 -G551 0.271092177181396 A534 -I539 0.268197140192986 S531 -N538 0.263308641167658 T398 -V440 0.261091082302326 N538 -G545 0.254011513057995 E535 -V540 0.253643014567993 C524 -I556 0.24987518450273 V520 -V562 0.247474969295042 K532 -N538 0.247305183314235 I539 -G545 0.235899117516361 A399 -G437 0.235380328290486 Q525 -Y563 0.234854046236327 Q525 -S557 0.232423033327322 K522 -R560 0.23072396565102 A399 -L441 0.226522265217324 V520 -Y563 0.211976318511454 V520 -S557 0.211476887303044 T398 -G437 0.210360254261184 E403 -F409 0.205518504330877 D529 -A534 0.204045960832283 I530 -T547 0.203666556484153 C524 -K564 0.199160602571131 E527 -Q552 0.189801764848496 I521 -A559 0.188957048393558 Q525 -K532 0.186859644151193 V520 -L558 0.184226416661796 L558 -Y563 0.182196423093353 T547 -A554 0.181001940725464 K522 -D537 0.180048800343357 E527 -K536 0.176202756928779 I539 -I556 0.168839882636918 K522 -R555 0.166453935135832 I530 -E535 0.153295467536918 E402 -E407 0.14809382476989 W401 -G437 0.14528578722746 E528 -S549 0.144183326901 W401 -K442 0.141025585254312 N538 -I546 0.138252061364206 I521 -I530 0.13761937083528 Q525 -I530 0.136623549013951 A523 -R560 0.136438734284723 E527 -E535 0.136391973474257 I556 -K564 0.135872421745282 I521 -K536 0.134767038096427 W401 -L441 0.132511542697599 E528 -N538 0.132471344151648 G545 -R553 0.132432299521595 E528 -I556 0.132195535217419 L526 -Y563 0.129506050103662 A523 -Y563 0.128329810957567 V520 -Q525 0.128305176140056 T547 -I556 0.126619077608932 K532 -T547 0.125641202951659 I530 -G551 0.124759152959959 E528 -G551 0.124402890844642 K522 -L558 0.122622181323234 I521 -S531 0.121727801268267 E402 -G437 0.121101567854639 A399 -G404 0.120700845945681 R553 -A561 0.120491878789923 G437 -K442 0.120026962150577 A523 -S531 0.119535886537961 E528 -Q552 0.118894679055308 I521 -E527 0.116227478832673 A523 -I530 0.115428282312362 V520 -A559 0.113784752925506 I539 -Q552 0.112824521786398 L526 -G550 0.110629399694978 A523 -A554 0.10968100090105 L526 -N538 0.109265157668942 I521 -R555 0.108980826755648 Q525 -I556 0.1084226622887 E528 -E535 0.108148044430834 E528 -A534 0.107935449839745 E528 -F533 0.107425062915528 C524 -S531 0.107072822572886 A534 -L548 0.106719113711474 A523 -G551 0.105967475561665 Q525 -V562 0.104807854101365 R553 -R560 0.103359524204598 L526 -V562 0.102988258734286 K522 -E528 0.10209892779461 L548 -L558 0.100231371592074 I530 -A559 0.0987139066761715 V520 -D529 0.0966975294593757 A523 -S557 0.0966495143530608 Q525 -S549 0.0954176577460353 Q525 -R560 0.0906799233597058 C524 -A561 0.0897103504774915 L526 -R555 0.0882700847812288 C524 -I530 0.0878545415582469 E402 -P439 0.0867216775952122 I521 -I539 0.0842597078913996 D537 -I556 0.0799125542694372 C524 -S549 0.0798756230061297 A534 -V540 0.0795894705191884 A523 -I556 0.0780872360158043 E535 -G545 0.0779542599229712 K532 -L548 0.0778100033984073 A523 -A561 0.0774164312430021 L548 -A559 0.0757529138211419 Q525 -R555 0.0731024747792978 G545 -G550 0.0729979690537 E402 -L441 0.0699770389194632 G404 -E410 0.0693163726617918 L526 -I539 0.0673350638137724 Q525 -F533 0.0671780918889695 D537 -Q552 0.066831367325121 T398 -P439 0.0667586077900584 L526 -R560 0.0656975412144194 A399 -V440 0.065657405166391 A523 -R553 0.0648570083876329 C524 -R560 0.0638876839534905 E527 -I539 0.0623977837226555 C524 -Q552 0.0621952938341197 D529 -I539 0.0597938681781494 L428 -F433 0.0590098078751184 A559 -K564 0.0589592613837056 F533 -Q552 0.0588840978986753 F405 -E410 0.0581022003516445 I521 -K564 0.0569695286431342 K522 -S557 0.0539498004469166 R555 -R560 0.0534667733373018 G542 -Q552 0.053123322589812 V540 -R553 0.0530592317499195 F433 -T438 0.0528969506175838 G542 -G550 0.0519982530345175 L541 -S549 0.0510276123825315 A534 -L541 0.0501344828556913 S427 -N432 0.0497825095013389 L526 -S557 0.0493329167794263 E403 -T438 0.0468432028574517 E527 -G551 0.046196172455176 I521 -A561 0.0461024481798999 W401 -E410 0.0457480122368385 E402 -F409 0.0450674408180149 D529 -T547 0.0442953063082001 F533 -G545 0.0441657915491458 V520 -I530 0.0438927323218943 I530 -R553 0.0438157333093803 I521 -S557 0.0431575012360019 Q525 -A554 0.0418795610385845 Q525 -G550 0.0409752457952335 K536 -T547 0.0404927747455734 K532 -I546 0.0389171863699276 E527 -D537 0.0380886938136813 F533 -I546 0.0371197682607303 G542 -S549 0.0364329227827371 I521 -Q552 0.0354318079965878 D537 -T547 0.0333377675797424 N538 -T547 0.0321810332552595 K522 -S531 0.0303963097171538 I530 -N538 0.029047040853768 D529 -N538 0.0282995974204494 K536 -I546 0.02820613400079 L526 -S549 0.0277762200331038 L548 -S557 0.0264647566237452 S557 -K564 0.0259051594376922 K522 -V562 0.0236040596356369 E535 -L541 0.0228389389640797 I530 -R560 0.0219034623532182 E528 -R555 0.0209921535952344 E527 -K532 0.0183044832793269 D529 -K536 0.0173401143831104 D537 -L548 0.0156984478741848 F400 -L436 0.014884017754162 I530 -Q552 0.0145853554565338 K536 -L548 0.0128554105352858 L526 -A534 0.0126374203695843 E527 -R560 0.0119887042957707 V520 -E528 0.0113156404335997 E527 -R555 0.0111049968941446 D537 -S557 0.00930657043295963 D529 -S557 0.00914955733015382 A534 -G545 0.00457678240142223 G550 -L558 0.00379054033497539 K522 -A559 0.00336428025268543 A534 -I546 0.00217352108071904 R553 -Y563 0.00180864204806874 F533 -I556 0.00124196332402082 L541 -G551 -0.00116889009964039 G550 -R555 -0.00141766043310421 F533 -T547 -0.00154000697515144 W401 -P439 -0.00231397184758952 F400 -K442 -0.0023369803806812 S531 -Q552 -0.00438626477540671 G542 -S557 -0.00555031221504487 G542 -R553 -0.00586667253114737 K522 -Y563 -0.0077556495103881 K536 -G545 -0.00782332175026396 K536 -L541 -0.00806841182977447 E527 -S557 -0.00843515454999005 E527 -A534 -0.00863854046699686 E527 -Y563 -0.00886031739628468 I530 -V540 -0.0102688676673548 L526 -D537 -0.0111725770997388 D529 -I556 -0.0125389418018531 N538 -I556 -0.016124228808903 D529 -E535 -0.0208822826618942 A554 -V562 -0.0210882777904273 E527 -S549 -0.0211782428876214 N538 -Q552 -0.0216454964622734 I521 -V562 -0.0220697941166748 W401 -F409 -0.0224139989763055 L541 -G550 -0.0224801499327922 Q525 -G551 -0.0228281454663647 I546 -R553 -0.0241149325970145 T547 -Q552 -0.0243643419709963 G551 -A559 -0.0248814600546667 Q525 -D537 -0.0255927127397895 I530 -R555 -0.0272162129892299 F533 -S549 -0.0279454581260339 C524 -V562 -0.0285861768061846 D529 -A559 -0.0287575362520287 V520 -A554 -0.0292638730096777 E535 -G542 -0.0294899828229163 L436 -L441 -0.0296319885642102 F429 -S434 -0.0298384473981694 G550 -A559 -0.0303306740325331 S557 -V562 -0.0306602267536547 D529 -S549 -0.0310704261511809 T547 -S557 -0.0320281039252244 I530 -S557 -0.0341464678161822 I521 -F533 -0.0345912533103307 V540 -I556 -0.035354467887712 G542 -I556 -0.0354464385584095 S531 -I556 -0.0357289351282977 K522 -I556 -0.0367261103690288 I539 -S549 -0.0389660842955482 I521 -I556 -0.0396540223312614 V540 -S549 -0.0426287951375692 I521 -R553 -0.0448804400088456 A523 -Q552 -0.046959056990294 D529 -A554 -0.0497022835329153 T547 -R553 -0.05126049225637 D537 -G545 -0.0515127207860968 K522 -E527 -0.0521539606468431 T547 -R555 -0.0522101999498581 G545 -I556 -0.052324990374657 V520 -Q552 -0.0526973597535663 I530 -G550 -0.0559716323994053 E528 -A559 -0.0563499100810354 L526 -A561 -0.0568222521852269 V540 -Q552 -0.0577430237539339 F400 -G437 -0.057836535835631 L541 -R560 -0.0579946247915131 Q552 -R560 -0.0581058372745549 A399 -L436 -0.0582691029938243 I521 -N538 -0.0583203559354359 S557 -Y563 -0.0592312946840653 W401 -L436 -0.0628470408222643 D529 -V540 -0.0656807232614165 S549 -R555 -0.0690588357703885 A399 -P439 -0.0691239396462184 E527 -N538 -0.0706380902687727 K522 -Q552 -0.07178553516097 E528 -L548 -0.0726860552064564 E527 -A559 -0.0736942113424894 Q525 -R553 -0.0737604776177661 I521 -K532 -0.0747806101163286 L541 -I556 -0.0747809685393903 S531 -D537 -0.0749834078916653 I530 -L548 -0.0772973058988602 E527 -A554 -0.0779870391285988 I530 -I556 -0.0782302999588023 E528 -A554 -0.0782834631141824 L541 -S557 -0.0791451394898708 S549 -S557 -0.0799596728301362 Q525 -A559 -0.0808001352492478 S531 -V540 -0.0814098801834275 K522 -K536 -0.082138332643793 Q552 -A559 -0.0823821196518697 S531 -I546 -0.0832321233909612 D529 -R555 -0.0838432705350574 I530 -S549 -0.0839304217052734 F533 -N538 -0.08394249177248 D537 -A559 -0.0842191418570787 G545 -Q552 -0.0847815387350979 A523 -D529 -0.0852690850492252 D529 -L541 -0.08706830901184 D537 -G542 -0.0886011740940074 L548 -R553 -0.0889023207558632 I546 -G551 -0.0896124991308413 I521 -A554 -0.089765693016471 A554 -Y563 -0.0903924747466185 I546 -Q552 -0.0915279260341295 F533 -L548 -0.0919006538588731 E528 -R553 -0.0920000174794278 Q525 -A561 -0.0924859065778594 Q525 -L548 -0.095288532188758 E528 -D537 -0.0957997908982389 A523 -E528 -0.0959261951062986 A399 -T438 -0.0970472318718406 S531 -L548 -0.0989131255633966 I521 -E528 -0.100019806094354 Q552 -A561 -0.100538871258751 I530 -G545 -0.103048549759771 I539 -L548 -0.103734760455688 E402 -E410 -0.105317838466347 D537 -R560 -0.105846651785364 L541 -R555 -0.106183052064487 K532 -L541 -0.106725785114493 E527 -L558 -0.106935371953048 S531 -R555 -0.111482225380367 I546 -I556 -0.112352996664922 R555 -K564 -0.11310255688347 E535 -T547 -0.113183064989951 D537 -R553 -0.113969588559215 D529 -G550 -0.115096783661159 Q552 -S557 -0.115901773719145 D537 -R555 -0.117624220826408 L526 -F533 -0.118419389258174 K532 -V540 -0.119074554112811 F533 -V540 -0.119113099975978 L526 -G551 -0.119846527263234 I530 -A554 -0.119899313714205 E403 -E410 -0.121338030411807 I521 -G551 -0.122668476739649 I539 -R553 -0.123503374171014 L541 -L548 -0.126427904161469 K536 -I556 -0.126863242147107 A554 -A561 -0.126935569540276 V540 -L548 -0.13391384956293 G550 -S557 -0.135286349684935 I521 -D537 -0.136103620925375 D537 -Y563 -0.138915699065281 K522 -A561 -0.143559345568286 E535 -I546 -0.14386567848008 E527 -I556 -0.143875382569277 L526 -E535 -0.143963747996247 G551 -S557 -0.149082649342703 R555 -Y563 -0.150061828138529 K532 -G551 -0.150642585531564 L541 -A554 -0.150651096272139 V520 -R555 -0.15079238886463 K532 -G545 -0.151136054539271 L541 -Q552 -0.152336397834154 A523 -K564 -0.152566661775941 I521 -D529 -0.153258106340665 D537 -I546 -0.153704121491815 L526 -L548 -0.153802532665242 R555 -V562 -0.154266574197564 I530 -L541 -0.155445485222556 S531 -I539 -0.155694397105511 E528 -I539 -0.155810194291392 C524 -A559 -0.156626349522396 S549 -I556 -0.158119867302235 E535 -L548 -0.15824915465198 K522 -A554 -0.158601418407585 F533 -L541 -0.158877257970015 E402 -L408 -0.162078787212378 I556 -Y563 -0.162337892644568 C524 -A554 -0.162811202700222 D529 -I546 -0.163038535182679 K536 -Q552 -0.164606675890122 E527 -L548 -0.165327167358999 E527 -R553 -0.168122882828575 G551 -R560 -0.168174858140338 I521 -L558 -0.168282649233365 K522 -D529 -0.170637112810306 K532 -D537 -0.172440673773895 W401 -G406 -0.175934925967859 G551 -L558 -0.176599209194458 G551 -I556 -0.177205414835444 R555 -A561 -0.179669871429631 I539 -T547 -0.180975802899704 D529 -L558 -0.181634905912717 G404 -F409 -0.182437040156143 D529 -D537 -0.184143515697776 E403 -V440 -0.184614965737005 L548 -R555 -0.185021443107965 W401 -L408 -0.186296118269769 A523 -R555 -0.18633573580436 A554 -R560 -0.186930726318371 Q525 -S531 -0.187110974399161 L526 -L558 -0.187209245264679 L558 -K564 -0.188483496443531 S549 -L558 -0.188871855326169 I530 -I546 -0.188880750252263 R553 -V562 -0.189735901302912 S431 -L436 -0.19017444543709 L541 -R553 -0.193597346672979 N538 -L548 -0.195953900858493 I556 -V562 -0.200542575404569 Q525 -L558 -0.203510366319663 V520 -E527 -0.204948760477344 C524 -G550 -0.206190261889121 L526 -K536 -0.206273174712332 V520 -K564 -0.207799234712507 R553 -A559 -0.208979701281926 V540 -T547 -0.218117639713086 G542 -L548 -0.218974834609385 A523 -L558 -0.219086741501698 Q525 -Q552 -0.224309389344328 T398 -T438 -0.230314599910235 L436 -K442 -0.230511144219001 L526 -K532 -0.231983097479805 L526 -A554 -0.234021299761418 C524 -Y563 -0.2358373456916 D529 -L548 -0.244302569983066 L526 -A559 -0.247452488500757 I521 -Y563 -0.250928208934605 Q525 -K536 -0.250963422463488 G550 -I556 -0.253545352473101 A554 -A559 -0.264756519933988 W401 -T438 -0.265105701919354 V520 -R553 -0.270595677056892 I530 -I539 -0.276996207762158 L526 -R553 -0.277741787995522 K522 -K532 -0.284563372120365 E402 -V440 -0.299090655458746 S531 -K536 -0.307793689709293 V520 -A561 -0.313357969777954 C524 -D537 -0.314856751456635 L548 -A554 -0.315676294778412 K522 -I530 -0.35377523751866 L526 -S531 -0.357267034958409 K532 -I539 -0.357970398287278 A523 -V562 -0.370287602860165 E403 -P439 -0.375229460761995 L548 -I556 -0.375317454238838 C524 -D529 -0.384332903787689 V520 -I556 -0.391043692637798 A523 -A559 -0.42440590313271 I556 -A561 -0.434552972225312 V520 -L526 -0.437045413500915 E527 -F533 -0.469171568334425 I530 -D537 -0.475512413821985 Q552 -L558 -0.51652312450978 V540 -G545 -0.519316749060555 S549 -A554 -0.526188689718419 C524 -S557 -0.562261505937684 C524 -R553 -0.58589957198995