[Mon Aug 29 16:52:47 2016] >Input file: TMA0A026WJF4M1G.pdb >TM segments: 586-627 MAIDEN score = -10.7113 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L609 -Q616 0.947894645055946 E588 -L604 0.806822567408856 L591 -I600 0.736403813052612 P598 -K623 0.703280923031022 L591 -Y601 0.678149682582897 F608 -A614 0.674239921390404 P598 -L625 0.626737018726421 P598 -F627 0.53853895666457 D599 -F627 0.520742055934926 Y587 -L604 0.520376025737304 Y587 -I600 0.517750435094682 E588 -P598 0.485454998569686 D599 -L604 0.471512306728959 D622 -F627 0.470235003464383 L591 -N597 0.465742494130637 L604 -Y620 0.450690145413779 F608 -K613 0.446459945697558 V607 -A617 0.44038296677199 N603 -K623 0.423419535247746 Y602 -K623 0.423103788992825 L604 -A617 0.396082519568425 P598 -N603 0.379720451389456 N596 -F627 0.379374618005611 S595 -Y601 0.365789318946912 L591 -N596 0.360631301089317 G605 -Y620 0.351828868965785 R589 -N596 0.345165482566042 Y587 -N603 0.34244877306459 A590 -S595 0.341928220905068 R589 -N603 0.303898108269457 Y602 -L625 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