[Fri Aug 26 16:47:08 2016] >Input file: TMA0A029PPG3M1D.pdb >TM segments: 323-339 MAIDEN score = -2.1800 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- S331 -I336 0.657225669121063 G330 -V335 0.558710920439749 F329 -G334 0.408158759534404 S331 -G338 0.297897269434201 L332 -G338 0.234956393246248 G327 -V335 0.217311376179829 G323 -C333 0.201797891337515 S331 -V339 0.16704269734284 G323 -G334 0.166104124975011 A326 -G334 0.151500904345222 G330 -G338 0.144403881023757 L328 -I337 0.108787612008848 G330 -I336 0.0978400597686768 L328 -V335 0.0804346058838767 G330 -I337 0.0535083488231702 G327 -I336 0.0445215817220426 G330 -V339 0.0374952541163234 G323 -L332 0.035848325896684 A326 -C333 0.0342746240059308 G323 -S331 0.0331135839674899 F329 -I337 0.0179518037186051 S331 -I337 0.0108336368864173 G327 -G334 -0.00259927828340567 G323 -F329 -0.00972133710389045 A326 -V335 -0.0100836060701462 G334 -V339 -0.0148880805524918 L325 -G334 -0.0354636842655137 F329 -I336 -0.0532104552822243 L324 -C333 -0.086008624758926 L324 -G334 -0.100869768946374 G327 -L332 -0.103598896838188 L328 -G334 -0.104038900245115 G327 -I337 -0.107105018087061 A326 -L332 -0.109254865241928 L324 -F329 -0.126006601867565 L328 -C333 -0.127127898601653 F329 -G338 -0.127530159098841 L324 -L332 -0.159056684645712 L325 -C333 -0.161338373211023 L332 -V339 -0.162700427245039 L328 -I336 -0.16406422933016 G323 -G330 -0.176361870009661 L325 -L332 -0.18770270677418 L324 -S331 -0.204054632883371 C333 -G338 -0.223093252067819 L325 -S331 -0.300149506649198 L325 -G330 -0.30270102916257 F329 -V335 -0.312978834297171 L332 -I337 -0.334359054687146 L324 -G330 -0.334815288073453 G327 -C333 -0.338388666556089 G323 -L328 -0.403567868075585 C333 -V339 -0.507516498270263 A326 -S331 -0.549362132266457