[Mon Aug 29 16:55:57 2016] >Input file: TMA0A045H504S2G.pdb >TM segments: A329-335_A388-403_A488-525 MAIDEN score = 11.0409 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L391A-D396A 7.36515722505771 L491A-R521A 1.84336561421496 D494A-V524A 1.39683554887841 V493A-I523A 1.24950334242435 L492A-I523A 1.19592384254534 E495A-I523A 1.13049027985105 I332A-L391A 1.10314188130618 I392A-V397A 0.973596135567473 E333A-L391A 0.885377431776446 V490A-T520A 0.863459996805254 V493A-R521A 0.825839636287566 D335A-L391A 0.825308985330623 V390A-V397A 0.801971739922314 L492A-V522A 0.773722335969596 V493A-V524A 0.745144499757918 R389A-V397A 0.67947987882054 F334A-V390A 0.578000942954041 L491A-P516A 0.563387595523767 I332A-V390A 0.554384127678904 L391A-V397A 0.548453326894589 L491A-V522A 0.522744509144498 L512A-R517A 0.51105088737153 R331A-G394A 0.49988431115587 V493A-V522A 0.453989440155896 D494A-V522A 0.442339855547319 R331A-L391A 0.441223965571756 V329A-R519A 0.438532543098375 F334A-L391A 0.429870946068494 L491A-R519A 0.412874705916108 E495A-A525A 0.39903010532292 T497A-E503A 0.3950991974736 E333A-D393A 0.373099584265297 I332A-G394A 0.355378676597681 D494A-R521A 0.354165107814134 E333A-T520A 0.347014901527534 L492A-V524A 0.346553495998713 T395A-L400A 0.342773916980765 L491A-T520A 0.323680603140833 G388A-A398A 0.31033781720138 V490A-V522A 0.303496782496662 A488A-S518A 0.30064087908459 D510A-R517A 0.297743093646239 V329A-P489A 0.282250393246024 G394A-L400A 0.279828949322927 I332A-I392A 0.275869125575875 G388A-D396A 0.269130544052023 V329A-V490A 0.26061725146274 E503A-V508A 0.259868884672503 R331A-T520A 0.258801484613947 D501A-D510A 0.251085208085254 D393A-D401A 0.249516361732556 P330A-I392A 0.243537577728643 T497A-L512A 0.229767952910071 D501A-V508A 0.223827481234328 A507A-A514A 0.221795058086421 D515A-V522A 0.214643373431509 R331A-D396A 0.213557313907411 G388A-V397A 0.200712936942686 F334A-R389A 0.200069126406939 V397A-R403A 0.199516361399367 D393A-T399A 0.194255779201751 E333A-I392A 0.193974034446012 D393A-T520A 0.193441447796809 V490A-R517A 0.191700866595188 T395A-D401A 0.190353446920306 R331A-V522A 0.190020608470502 L500A-V508A 0.184565048784345 R331A-V397A 0.181944786935059 A398A-R403A 0.180175892401639 D510A-R521A 0.178958934864609 P489A-P516A 0.178201587783954 D510A-R519A 0.177775131795946 D396A-R403A 0.177451791379338 D393A-R521A 0.176268445549941 P330A-L492A 0.175628568390088 N504A-D510A 0.174850132109718 E505A-D510A 0.17172901342128 I332A-D393A 0.167188374154354 E495A-N504A 0.165324413875577 D393A-V490A 0.160523330278289 D494A-A525A 0.159192395924586 I332A-V490A 0.150604034105467 A514A-R521A 0.150210402940045 V397A-V490A 0.149871575732683 R403A-A488A 0.14874083475977 R331A-S518A 0.148633509122764 A499A-E505A 0.148191145050564 D335A-T395A 0.14466097699816 A488A-R517A 0.139321148252644 I332A-R521A 0.135387504173551 V493A-A525A 0.134416695721121 I392A-L492A 0.131703527747329 R331A-I392A 0.131347731629288 L491A-V524A 0.1300428449125 P330A-D396A 0.128768205763819 S498A-V509A 0.12856794840906 P330A-R521A 0.125838753706931 V329A-R521A 0.125333400465236 T497A-D510A 0.121199872978897 A488A-V522A 0.11966405103342 V509A-A525A 0.116174239688912 V329A-V522A 0.114186106328019 A496A-R521A 0.113245468598085 A496A-A506A 0.112283940693496 A513A-V522A 0.110029659754711 R331A-R521A 0.10947755411171 T395A-A402A 0.109166585902122 N504A-V509A 0.108985948135986 L512A-S518A 0.10852732974597 A499A-A525A 0.108354107745349 V390A-T520A 0.107929521650354 A496A-A513A 0.107241050028852 V329A-P516A 0.1051770147773 P489A-R517A 0.10502620305971 L492A-D515A 0.104609721678456 R389A-D396A 0.10436319430248 V508A-A513A 0.103197568650199 A499A-A507A 0.102955299413938 A506A-A514A 0.101836561084351 L391A-T399A 0.10107950047946 P489A-A513A 0.0996359712859718 P489A-S518A 0.0992274512239506 A507A-P516A 0.0990373713879724 L491A-A496A 0.0944552656123934 V509A-R517A 0.093348493933652 R331A-R519A 0.0933059657646756 S498A-A506A 0.0929096702836927 A488A-L512A 0.0928052883300678 D335A-D393A 0.0919639060799091 A496A-N504A 0.091823753016826 E505A-A525A 0.091097451907058 L491A-D515A 0.0892036371291685 L492A-L512A 0.0882318989592541 V329A-T395A 0.0869992947749831 L391A-V490A 0.0865493202861845 A488A-A514A 0.0844316225173252 R389A-L400A 0.0839795231389513 I332A-P489A 0.0835892904151256 A496A-V522A 0.0817019599383535 L491A-I523A 0.0806908264735404 A511A-S518A 0.0790249495816777 A514A-I523A 0.078404185494264 V329A-A488A 0.0783700112958901 A511A-I523A 0.0778870732873638 R389A-T399A 0.0778602226583782 V493A-A514A 0.0772111444056041 A496A-A511A 0.0771898250253584 V508A-A525A 0.0769028920988859 A488A-I523A 0.0768081793252183 V390A-L400A 0.0768009524010056 I332A-T520A 0.0761626134761908 A499A-V524A 0.0758949398090305 P330A-R517A 0.0755039122522709 D501A-A506A 0.0751193462379747 D393A-P489A 0.0743124151937522 L391A-P489A 0.0741753166125184 S498A-V508A 0.0724033570684948 T395A-V490A 0.0711358386757812 A496A-A502A 0.0710919060810227 V490A-L512A 0.0706830133241354 V493A-R519A 0.0704462853581551 I332A-A398A 0.068748907556067 A488A-V493A 0.0677882112531689 V493A-T520A 0.0660910241500872 L500A-V509A 0.0659255633427271 I332A-L400A 0.0656024340810002 A402A-A488A 0.0650664176807454 L492A-A514A 0.0620999527379222 V329A-V397A 0.0604851503629211 R331A-L492A 0.0600121355336896 D396A-A402A 0.0593825880870789 V493A-A513A 0.0590818798971986 D335A-I392A 0.0586200332301128 A496A-A507A 0.0585310351043411 E505A-L512A 0.0576096846105942 L492A-A525A 0.0565628039651704 E333A-G394A 0.0546733065247635 E503A-A511A 0.0532969971006834 R517A-V522A 0.053132738228113 V509A-R521A 0.0529251917724372 A499A-A506A 0.0505383740694834 V329A-R517A 0.0502204490012317 P330A-V490A 0.0496991569808176 L491A-A511A 0.046931281710483 F334A-L492A 0.0461280744077461 V493A-P516A 0.0440717886745254 A488A-A513A 0.0436424354070786 E495A-L512A 0.0433794723430552 G394A-V490A 0.0431886121230831 L492A-A513A 0.0416896971395853 P330A-P516A 0.0411203426545894 L492A-T497A 0.0391483507268466 V390A-A402A 0.0388261559113836 D335A-G394A 0.0383328483179155 T497A-A513A 0.0379164917982575 P489A-R521A 0.0376091833704981 F334A-G388A 0.0356443997495948 L500A-A525A 0.0325743303972449 G388A-G394A 0.0319058668131063 A488A-R519A 0.0318860828025995 E495A-V509A 0.0312334409159147 D494A-T520A 0.0306978074740449 P330A-D393A 0.0296392465350137 V329A-L491A 0.0277371977910619 E333A-V522A 0.0270500612464081 L491A-A513A 0.0263926183160827 G394A-T520A 0.0262750243125023 T497A-A511A 0.0249721106741934 D494A-V509A 0.0242215694086498 L491A-R517A 0.0231512482181015 I392A-R403A 0.0221687010688818 I392A-L491A 0.0211862061814543 E495A-V508A 0.0205382527729003 A496A-D510A 0.0202408290100422 I392A-A402A 0.0200075719974953 L391A-V522A 0.0195654254224968 A506A-A525A 0.018539713781363 E333A-V490A 0.0182897391229134 F334A-T395A 0.0158875552118758 S498A-N504A 0.0147412194708003 A496A-E505A 0.0137652840183451 L391A-T520A 0.012092154177318 E495A-R521A 0.0104415075534519 T497A-V509A 0.00940550001033102 D510A-S518A 0.00914404879960501 V490A-I523A 0.00836867774827432 P330A-V390A 0.00829017031282148 D335A-G388A 0.005789273645465 A502A-A525A 0.00406380906154524 A513A-I523A 0.00394438702660871 I332A-T395A 0.00365473402002947 G394A-T399A 0.0027004399648527 F334A-A398A 0.00235189872679031 V390A-V522A 0.00217816459391251 V508A-I523A 0.0020062795237461 A496A-D501A 0.000796473749175242 L491A-A514A -0.000474292923396291 A514A-V522A -0.000796403580382687 R331A-P516A -0.00136805659798922 I392A-P489A -0.00149758307717018 T497A-E505A -0.00337745075506257 V493A-A499A -0.00438664836347946 P330A-V397A -0.00481873053458504 L400A-V490A -0.00484931314754622 N504A-A513A -0.00503368192274195 I392A-V522A -0.00645592358154579 L492A-V508A -0.0067802192644324 P489A-A514A -0.00698043466558351 R331A-V490A -0.00831876029222034 V490A-A513A -0.00936109930638984 L400A-P489A -0.0108980548005224 I392A-R519A -0.0109733529586078 A499A-V508A -0.0121164158604925 E333A-R389A -0.0137115149879068 E333A-G388A -0.0156350123862072 I392A-A488A -0.0163118220976529 A496A-A525A -0.0163691158338066 D501A-A507A -0.0167077593483924 A499A-V509A -0.0168430374045003 E495A-V524A -0.0179583373524395 V509A-V522A -0.0185109956821741 F334A-V522A -0.0186813896106512 V390A-V490A -0.018726082546678 R389A-A398A -0.0235419304343882 G388A-T399A -0.0238632871788313 V509A-V524A -0.024533858833943 A502A-A511A -0.0261466632595617 V493A-A511A -0.027901900277745 P330A-G394A -0.0282099346461773 P489A-V522A -0.0289650533949968 D494A-P516A -0.0291542133320499 A496A-E503A -0.0309152222678901 V490A-V524A -0.0309932727565436 I332A-R519A -0.0314793962624772 P330A-V522A -0.0320032113686626 D494A-A499A -0.0320062909728476 R331A-T395A -0.0321117087483455 I332A-T399A -0.0326303589781816 I332A-S518A -0.0336014728640362 R331A-R389A -0.0339433630496134 D510A-I523A -0.0347221379797373 V490A-A514A -0.0348819075597429 L500A-A506A -0.0356641860663217 I332A-G388A -0.0357502770390052 I392A-L400A -0.0363767846788843 A514A-T520A -0.0411098862192247 V490A-D515A -0.0434376870617239 E505A-A513A -0.0443639605633264 P516A-I523A -0.0458592078668874 I332A-I523A -0.0459465045451513 A496A-P516A -0.0471982383882859 L491A-T497A -0.0482151624006688 P330A-D515A -0.0482910347882604 P330A-I523A -0.0485459654979667 L492A-S498A -0.0491144819290463 I392A-D401A -0.0498863951881796 E333A-D396A -0.0519412151352983 A513A-V524A -0.0526831051892822 V490A-A496A -0.0526831051892822 I392A-R521A -0.0538680821892701 L512A-T520A -0.0539568994325066 R403A-P489A -0.0554027720764654 V329A-T520A -0.0559389180156877 G388A-T395A -0.0569143225972548 A511A-R519A -0.0579504317023805 D393A-L400A -0.0592079670463885 V397A-P489A -0.0596079682262145 T497A-A507A -0.0597980235774447 E503A-D510A -0.0631632341210491 E333A-A398A -0.0633487479642585 S518A-I523A -0.0633953976284038 P489A-L512A -0.0636408696661386 N504A-A511A -0.0646150757645201 N504A-L512A -0.066478607787315 P489A-T520A -0.0667969857943751 R389A-T395A -0.0670642044597676 P330A-P489A -0.0678289127230851 L491A-S518A -0.0679996501571676 E333A-V390A -0.0696304660729457 P516A-V524A -0.0701628705627917 F334A-V490A -0.0703877854772559 L491A-V509A -0.0716268163266278 D501A-V509A -0.0730577727571182 P489A-I523A -0.0731574624543923 V493A-E505A -0.0736455276868213 E505A-V524A -0.0736891508786388 V508A-P516A -0.0747929062118581 L491A-A525A -0.0752906946307768 S498A-E505A -0.0754225864165083 V493A-D515A -0.0759189101178404 I332A-L491A -0.0772561397753093 E505A-A514A -0.0783201432285323 S498A-I523A -0.0803330674689282 R331A-A488A -0.0816338811255459 E495A-A513A -0.082779348586453 D393A-A398A -0.0828097722923167 S498A-A507A -0.0829052964245385 V508A-R517A -0.0835447943208685 V493A-V508A -0.083671589094362 D494A-L512A -0.0838146576493284 A502A-D510A -0.084542384106195 A507A-D515A -0.0848358406747055 D494A-L500A -0.0856069610635831 P330A-R519A -0.0856694954324642 I332A-V397A -0.0860236124312266 P330A-T395A -0.0862362040267921 L391A-D401A -0.0862607253092508 F334A-T520A -0.0863861789635658 E505A-I523A -0.0865903574749378 F334A-D393A -0.0874514566958418 L512A-I523A -0.0888539946947827 T497A-A502A -0.0889127346399705 V493A-V509A -0.0919865264040065 D335A-A398A -0.0924842047753529 E495A-A506A -0.0925744721147717 T497A-N504A -0.0928206518854365 I332A-L492A -0.0934040025264628 V509A-R519A -0.0941506820376903 P516A-V522A -0.0956158048596629 E495A-A502A -0.096382906946298 S498A-E503A -0.0964711172481811 D393A-R519A -0.097643740583766 D515A-I523A -0.0993780327611936 E495A-D501A -0.100148015165427 V508A-R521A -0.102619129886628 D335A-V397A -0.103734765874407 L492A-V509A -0.104445204164549 I332A-D396A -0.104746472007568 L512A-V524A -0.105319455327745 A496A-V524A -0.106328296047963 E505A-A511A -0.107092995416312 T497A-V522A -0.108331346259035 L491A-V508A -0.108902114120301 R331A-L491A -0.109733525044707 V493A-L500A -0.11115844450145 R331A-L400A -0.112744305957646 V329A-G394A -0.113031529295776 A488A-P516A -0.113679068511551 A513A-T520A -0.114670872157595 L500A-D510A -0.115417036154115 D494A-V508A -0.116163794164994 E333A-R521A -0.117521671548892 A499A-N504A -0.125777605189308 A511A-P516A -0.131815509995847 D510A-D515A -0.133894570263591 A488A-T520A -0.135045566573975 L391A-A402A -0.136022224174081 F334A-R521A -0.13844506536436 A496A-V508A -0.139093643670084 V509A-I523A -0.140422044135113 F334A-D396A -0.140612937690362 I332A-A488A -0.14077298715959 L500A-L512A -0.141794832055879 F334A-I392A -0.142507925954905 V390A-T395A -0.144622203716465 L492A-R517A -0.145318760536764 P330A-A488A -0.145954961567319 L492A-S518A -0.147277004250784 D393A-A488A -0.147768108030655 L500A-A511A -0.151420900110004 E333A-T395A -0.15277461409427 E333A-L400A -0.154178205125794 E333A-T399A -0.15483968209836 P330A-L400A -0.155253181654162 E333A-L492A -0.155603532419742 D396A-D401A -0.157259852806681 R331A-V390A -0.157983955908208 L512A-A525A -0.161802462664839 F334A-G394A -0.16222166998549 E503A-L512A -0.163286691789498 L500A-A507A -0.166786827476982 T497A-V524A -0.169357342971091 A506A-D515A 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