[Mon Aug 29 17:01:11 2016] >Input file: TMA0A045I5U9S1G.pdb >TM segments: B25-32_B34-47_B56-74 MAIDEN score = -1.4601 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- F38B-Y64B 1.0226989690863 H67B-L74B 0.944952049912613 V34B-E65B 0.748424657021732 L66B-L74B 0.698140520557905 K68B-L74B 0.637431192809775 F38B-E65B 0.503084961042084 E39B-P60B 0.48151292927731 F38B-L66B 0.469945262683961 P60B-E65B 0.46115496735122 E43B-P60B 0.4486053477729 V34B-L66B 0.388419792361939 P29B-E35B 0.370899527226295 E39B-G62B 0.340390897509244 A30B-G36B 0.327926511413916 E65B-G71B 0.315694707997911 E39B-Y64B 0.307941336516586 G36B-E65B 0.296607655980321 D46B-V57B 0.278188729296145 Y64B-R73B 0.258435004172956 F28B-G40B 0.257586623901271 F28B-E39B 0.25331830264364 H67B-R73B 0.249450267819769 Q26B-F38B 0.239431571701309 V42B-Y64B 0.229887827902262 Q26B-G40B 0.226244242509309 Q26B-F37B 0.202398662618925 A30B-E35B 0.193009777514346 G40B-L66B 0.178511341607839 G40B-G62B 0.17309797601141 F28B-E35B 0.169464653119631 V34B-E39B 0.16272832813006 G40B-E65B 0.160495908221986 E65B-R73B 0.158744658943249 I32B-M41B 0.153727603090914 E39B-A61B 0.142978080663752 E35B-H67B 0.142651627739658 E39B-R73B 0.140798976562985 I32B-L66B 0.137539153079584 H67B-V72B 0.135807163795614 G31B-F37B 0.135284168954953 E39B-H67B 0.122940510139723 V34B-R73B 0.120447165252089 V34B-H67B 0.118951362565886 M41B-D46B 0.118334761850702 F37B-H67B 0.11746827905174 E43B-E65B 0.112598014132496 L44B-A58B 0.108328648504372 F45B-Y64B 0.108148968524942 E43B-S63B 0.105780704006738 E35B-Y64B 0.105305794689781 A58B-S63B 0.104688207695791 V42B-S63B 0.101208729629585 E35B-R73B 0.0999601739856014 S25B-A30B 0.099065670743653 E35B-L66B 0.0939155338462824 V27B-G40B 0.092428404594977 G62B-R73B 0.0911219411952595 D46B-P60B 0.0872684004670359 L44B-L66B 0.0869809585272141 F28B-L74B 0.085601864622685 G40B-D46B 0.0853730412986149 E35B-V42B 0.0799262798442681 A30B-H67B 0.0770969686236018 V27B-I32B 0.0744079309608505 V34B-V72B 0.0743933372631709 Y64B-N70B 0.0739680709320873 S63B-R73B 0.0682713123135624 E35B-E43B 0.0681006345368491 E43B-Y64B 0.0655475924891606 S25B-A47B 0.0646162403967585 F38B-P60B 0.0631158478944929 I32B-L74B 0.061336684191343 V27B-V42B 0.056841107065166 A47B-A58B 0.0524091999977905 G36B-E43B 0.0510834995536054 L59B-Y64B 0.050747573222421 F45B-L59B 0.0503179548909052 P29B-L66B 0.0501039917143355 L44B-Y64B 0.0491142921029901 M41B-E65B 0.0483802771688167 V34B-S63B 0.0481717437129432 F37B-S63B 0.0476627034289425 A47B-P60B 0.0418892056015228 A30B-L74B 0.0408926135144894 E35B-M41B 0.0402166038945613 A30B-L66B 0.0378998814057094 G36B-S63B 0.036768531754362 G40B-S63B 0.0359678080952536 Q26B-V42B 0.035494143890991 S63B-L74B 0.0319600244746144 Q26B-E43B 0.0306354097452677 F37B-L66B 0.0283277196321139 S25B-L44B 0.0273705114929308 E43B-L59B 0.0260605465475092 L44B-P60B 0.0257042705840966 S25B-V42B 0.0248843005422508 E43B-A58B 0.0208339745225246 E39B-A47B 0.0205428622348283 G40B-A47B 0.0201369350994227 A30B-F37B 0.0198125475488382 F38B-R73B 0.0197472446781775 E35B-G62B 0.0196711436360946 V27B-F37B 0.0185739108044665 G36B-L74B 0.0165885679341944 M41B-P60B 0.0162337709174936 S25B-D46B 0.016122947183148 F38B-G62B 0.00962226944580014 V42B-A61B 0.00814648568884202 S25B-M41B 0.00617614478004613 E35B-E65B 0.00593703324962935 S63B-V72B 0.00498446520104157 V27B-F45B 0.00342542267574164 G31B-F38B -0.00129903615012328 F28B-F38B -0.00176989980704878 G31B-L66B -0.00352717926930368 E35B-S63B -0.00358674520845681 F45B-E65B -0.00448312000428697 Q26B-L66B -0.00518167878702958 Q26B-A47B -0.00572521443336127 A58B-Y64B -0.00661313402912089 F37B-L74B -0.0069345132144365 V27B-F38B -0.0096397534594046 G40B-P60B -0.0100296844764554 S25B-F38B -0.011192687054481 F28B-V42B -0.011502968851556 V42B-A58B -0.0132112576931185 G36B-L66B -0.0140588612462507 V42B-G62B -0.0149740212361915 Q26B-F45B -0.0157845578439169 Q26B-E39B -0.020946188201639 P29B-F37B -0.0211007277443502 G31B-G36B -0.0211319638695331 F38B-A47B -0.0215442991421781 F28B-L44B -0.0216753032900501 V42B-H67B -0.0249473769153123 F38B-E43B -0.0267843687443764 S25B-K68B -0.0270082107170908 F45B-L66B -0.0277972636249482 E65B-N70B -0.028967872240643 Q26B-V34B -0.0315728334438519 A30B-M41B -0.0337420690978179 D46B-Y64B -0.0390250955765665 G36B-Y64B -0.0430243433155364 D46B-L59B -0.0446065181950681 V27B-V34B -0.0456791531950875 M41B-S63B -0.0477257367491264 P29B-V42B -0.0483605843436585 F28B-G36B -0.0486802708084024 F37B-D46B -0.0509946284319467 P29B-F38B -0.0522242790282641 E43B-A61B -0.0528457186872608 F45B-P60B -0.0538743448123382 V27B-E39B -0.0552850091563992 D46B-G56B -0.0570566906069008 L66B-V72B -0.0572417939110625 Y64B-L74B -0.0575558767276745 E43B-G62B -0.0601669762459602 F38B-K68B -0.0603246803031521 V42B-E65B -0.0604316776112057 P29B-G40B -0.0648984201007674 Y64B-I69B -0.0677607131783798 V27B-G36B -0.0689572700420689 F37B-F45B -0.0701863305098263 F28B-E65B -0.0704867999462513 F38B-S63B -0.0709948420249082 S25B-F45B -0.0712175269371367 P29B-L74B -0.0742271731647257 G36B-L44B -0.0768583063727606 I69B-L74B -0.0769184172061816 F45B-A58B -0.0770477361245305 K68B-R73B -0.0781747078589929 E39B-L44B -0.079741902567501 F38B-D46B -0.0805983563854697 Y64B-G71B -0.0812431387194086 Y64B-V72B -0.0848396973480807 V27B-L66B -0.0869456201064072 Q26B-D46B -0.0882149819086688 E39B-D46B -0.0899686591172622 V42B-R73B -0.0941506820376903 A30B-F38B -0.0946119014769566 P29B-M41B -0.097375103315033 F38B-L74B -0.103540575538964 A47B-L59B -0.103599160858243 E43B-L66B -0.105405115832561 G31B-L74B -0.10638797423309 V34B-K68B -0.107872463142882 V34B-V42B -0.10888076254939 E39B-S63B -0.111106053941876 F37B-L44B -0.113293416377151 E65B-V72B -0.113300191443447 I32B-F38B -0.113598620847679 F28B-M41B -0.113966866825267 I32B-G40B -0.116318627809615 E39B-E65B -0.12039161986217 F37B-Y64B -0.126720681864325 V34B-G40B -0.126871976431299 I32B-E39B -0.12818797939086 M41B-H67B -0.131171000207082 F38B-H67B -0.131183538214837 F28B-H67B -0.131533374994392 V34B-E43B -0.133102236815994 E35B-G40B -0.140786302985795 G40B-Y64B -0.141448863874251 P29B-V34B -0.152745658363084 F28B-F45B -0.153324627368524 G36B-M41B -0.155538670246116 F38B-A61B -0.155962348393809 F28B-L66B -0.156296641829219 P60B-L66B -0.157430920296027 I32B-E65B -0.15784107835309 D46B-A61B -0.158864623729965 L44B-E65B -0.159704756356479 E39B-L74B -0.159865710867579 V42B-L59B -0.159984728932594 G36B-V42B -0.162832860795869 E39B-L66B -0.16537041066282 E39B-L59B -0.165963292490787 L59B-E65B -0.16613673297841 E35B-L74B -0.169274181325127 F28B-E43B -0.170223124593409 V27B-L44B -0.172136824471323 E65B-L74B -0.172884671389407 S25B-L66B -0.175244670062812 Q26B-K68B -0.181514421454896 F38B-F45B -0.186578135048964 F28B-V34B -0.187802664379564 P29B-G36B -0.189048911428326 M41B-Y64B -0.197231763080111 V42B-P60B -0.20852430052045 V42B-L66B -0.217813791682802 Q26B-L44B -0.232199747637399 D46B-A58B -0.233929563622474 G40B-F45B -0.258268934496227 V27B-M41B -0.264180987858885 D46B-E65B -0.266331187472496 F38B-L44B -0.27630339553166 I32B-F37B -0.278444875204997 M41B-L66B -0.286739446415873 P29B-E65B -0.290122376065404 L66B-G71B -0.303912990460394 M41B-A47B -0.305532441623392 P29B-E39B -0.318682882178419 F37B-V42B -0.330957889240438 Q26B-M41B -0.339019799031436 V34B-M41B -0.356807027993256 V34B-Y64B -0.386182294730804 E39B-F45B -0.392417140013143 F28B-F37B -0.415198279893628 V42B-A47B -0.41866881120668 F37B-E43B -0.424863164049418 V34B-L74B -0.42723227929683 F37B-E65B -0.436171907407812 Q26B-H67B -0.55101349949378 L66B-R73B -0.570629963846413